KEGG   Rattus norvegicus (rat): 303167
Entry
303167            CDS       T01003                                 
Symbol
Trim58
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM58
  KO
K12027  tripartite motif-containing protein 58 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    303167 (Trim58)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     303167 (Trim58)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    303167 (Trim58)
SSDB
Motif
Pfam: SPRY PRY zf-C3HC4_4 zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_6 zf-RING_2 zf-C3HC4_3 zf-RING_10 zf-RING_5 Sina_RING zf-RING_4 Trm112p DUF885
Other DBs
NCBI-GeneID: 303167
NCBI-ProteinID: NP_001178570
RGD: 1566174
Ensembl: ENSRNOG00000026430
UniProt: D3ZYF5
Position
10:43523341..43536435
AA seq 485 aa
MATAPGERLQEEARCSVCLDFLQEPISVDCGHSFCLRCISELCEKSDSAQGVYACPQCRG
PFRPSSFRPNRQLASLVDTVRQLGLGTGHAGSRQCSRHGEDLSHFCEEDQAMVCWVCDTS
PEHRSHRTEPLQEAASRYQRMLQVALELVKKEMEEALTQEANVGKKTIIWKEKVEMQRQR
FRLEFEKHRGFLAQEEQLQLRRLEEEERATLQRLRDSRNRLAQQNKALKELAEELEEMSQ
RPAVALLEGARGVLTRSEAMTRLEPEAVPMELKTVCRIPGMREMLRKFQVDVKLDPATAH
PSLLLTTDLRSVQDAEVWRDVPSNPERFDTWPCILGLQGFSSGRHYWEVIVGERAEWGLG
VCQDSVLRKGETTPSPENGVWAMWLLRGSEYMVLSSPSVPVFQDERPRRIGIFLDYEAGQ
ISFYNVTNGSYIYTFNHLFSGVLRPYFFVCDTTPLILPPMTEAGPGNWTSRGLLDFAVAA
RSEEY
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggccacagcacccggggagcggctgcaggaggaggcacggtgctcagtgtgcctggac
ttcctgcaggagcccatcagcgttgactgtggtcacagcttctgtctgcggtgcatatct
gagctctgcgagaaatcggacagcgctcagggagtctatgcttgtccccagtgcaggggt
cccttcaggccctccagcttcagacccaaccggcagctggccagcctggtggacaccgtg
cggcagctggggctgggcaccggacacgcggggtcgcgtcagtgttcgaggcacggtgag
gacctgagccacttctgtgaagaggaccaagcgatggtgtgctgggtctgcgacaccagc
cctgagcaccggagccaccgcactgagccgctgcaggaggcagccagccgctaccagagg
atgctccaagtggctttggaacttgtgaagaaggaaatggaggaggctctgacccaggag
gccaacgtgggaaagaagaccatcatctggaaggagaaagtggagatgcagagacaacgt
ttcaggctggagtttgagaaacaccggggctttctggcccaggaggagcagctgcagctg
aggcgactggaagaggaggagcgagcaaccctgcagagactgcgtgacagtaggaacagg
ctggcccaacagaacaaagccctgaaggaactggctgaagagctggaggagatgagtcag
aggccagcggtagcactgctggagggagcgagaggagtcttgacgcgaagcgaagctatg
accaggctggaaccagaggctgtccctatggagctgaagaccgtgtgccgcatccctggg
atgagggagatgctgaggaagttccaagtggacgtgaaactcgatcccgccactgcccac
ccaagcttgctcttaacgacggatctgcgcagtgtgcaggatgcggaggtctggagggat
gtcccgagcaaccctgagcgctttgacacctggccctgcatcctgggcctgcagggcttc
tcctccgggaggcattactgggaagtcatcgtgggggaaagagcagagtgggggctaggg
gtctgccaagactcagtgcttagaaaaggggagaccacaccgtccccagagaatggtgtc
tgggccatgtggctcctgagggggagcgagtacatggtcctgtcctctccctcggtgcct
gtgttccaagatgagcgacctcgtcgcatcgggatctttttggactacgaagccggccaa
atctccttctacaatgtcacaaatgggtcttacatctacacatttaaccatctcttctcc
ggtgttctcaggccctatttcttcgtctgtgacacaactcctcttatcttgccacccatg
acagaagcaggacctggaaactggacttccaggggtctccttgattttgctgttgctgcc
agaagtgaggaatactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (9)   
   RefSeq(nuc) (7)   
   GenBank (1)   
   EMBL (1)   
Protein domain (16)   
   Pfam (16)   
All databases (41)   

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