KEGG   Rattus norvegicus (rat): 303188
Entry
303188            CDS       T01003                                 
Symbol
Rai1
Name
(RefSeq) retinoic acid-induced protein 1
  KO
K19749  retinoic acid-induced protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    303188 (Rai1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    303188 (Rai1)
SSDB
Motif
Pfam: zf-HC5HC2H zf-HC5HC2H_2
Other DBs
NCBI-GeneID: 303188
NCBI-ProteinID: NP_001258136
RGD: 1308500
Ensembl: ENSRNOG00000060615
UniProt: A0A0G2K4G0
Position
10:45412748..45507747
AA seq 1887 aa
MQSFRERCGFHGKQQNYPQTSQETSRLENYRQPGQAGLSCDRQRLLAKDYYNPQPYTGYE
GGTGTPAGTVATAAADKYHRGNKSLQGRPAFPSYVQDSSPYPGRYSGEEGLQTWGSPQPP
PPQPQPLPGAVSKYEENLMKKTVVPPNRQYPEQGPQLPFRTHGLHVPPPQPQQPLAYPKL
QRQKPQNDLASPLPFPQGSHFPQHSQSFPTSSTYAPTVQGGGQGAHSYKSCTAPSAQPHD
RPMSANASLAPGQRVQNLHAYQPGRLGYEQQQQALQGRHHTQETLHYQNLAKYQHYGQQG
QGYCPADTAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFPYSQQPLS
TGAFPTGITDHSHFMPLLNPSPTDAASSVDPQVSNCKPLQKEKLPDNLLSDLSLQSLTAL
TSQVENISNTVQQLLLSKATIPQKKGVKNLVSRTPEQHKSQHCSPEGSGYSAEPAGTPLS
EPPSSTPQSTHAEPQDTDYLSGSEDPLERSFLYCSQARGSPARVNSNSKAKPESVSTCSV
TSPDDMSTKSDDSFQSLHSTLPLDSFSKFVAGERDCPRLLLSALAQEDLASEILGLQEAI
VEKADKAWAEASSLPKDNGKPPFSLENHSTCLDTVAKTSWSQPGEPEALPEPLQLDKGGS
TKDFSPGLFEDPSVAFATTDPKKTTSPLSFGTKPLLGTATPDPTTAAFDCFPDTTTASSV
DGANPFAWPEENLGDACPRWGLHPGELTKGLEQGAKASDSVGKADAHETSACLGFQEEHA
IGKPAAALSGDFKQQEADGVKEEVGGLLQCPEVGKADQWLEDSRHCCSSADFGDLPLLPP
PGRKEDLEAEEEYSSLCELLGSPEQRPSLQDPLSPKAPLICTKEEAEEVLDTKAGWASPC
HLSGEPAVLLGPSVGAESKVQSWFESSLSHMKPGEGPELERAPGSASTSQGSLAPKPNTP
AVPEGPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPALPKDLLLPESCTGPPQGQAE
GAGAPGRGLSEGLPRMCTRSLTALSEPQTPGPPGLTTTPTPPDKLGGKQRAAFKSGKRVG
KPSPKAASSPSNPAALPVASDSSPMGSKTKEPDSPGMPGKDQRSMVLRSRTKPQQVFHAK
RRRPSESRIPDCRPTKKPPANNHLPTAFKVSSGPQKEGRMSQRGKVPKPGTGSKLSDRPL
HTLKRKSAFMAPVPAKKRSLILRSNNGSGVDGREERAESSPGLLRRMASPQRARPRGSGE
PPPPPPLEPPAACLGLATQSSLPSAVRTKVLPPRKGRGLKLEAIVQKITSPGLKKLACRV
AGAPPGTPRSPALPEKRSGGSPAGAEEGVGGMGAGQMLPAASGADPLCRNPASSRSLKGK
LLNSKKLSSAADCPKAEAFMSPETLPSLGTARAPKKRSRKGRTGALGPSKGPLEKRPCPG
QALILAPHDRASSTQGGGEDNSSGGGKKPKTEELGLASQPPEGRPCQPQTRAQKQPGQAS
YSSYSKRKRLSRGRGKATHASPCKGRATRRRQQQVLPLDPAEPEIRLKYISSCKRLRADS
RTPAFSPFVRVEKRDAYTTICTVVNSPGDEPKPHWKPSSVASSSTSSSEPAGASLTTFPG
GSVLQLRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCGPYYPEHCLPK
KKPKLKEKVRLEGTLEEASLPLERTLKGLECAASTTAATPTTTTITTTTTLGRLSRPDGP
ADPAKQGSLRTSARGLSRRLQSCYCCDGQGDGGEEVAPADKSRKHECSKEAPAEPGGDTQ
EHWVHEACAVWTSGVYLVAGKLFGLQEAMKVAVDMPCTSCHESGATISCSYEGCTHTYHY
PCANDTGCTFIEENFTLKCPKHKRLPL
NT seq 5664 nt   +upstreamnt  +downstreamnt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacagcaaaactacccacagacc
tcacaggagacatcgcgtctggagaactacaggcagccgggtcaggctgggctaagctgt
gatcgacagcggctgctggccaaggactattacaaccctcagccctatacaggctatgag
ggcggcactggtacacctgcaggcacagtggccacagcagctgcagacaagtaccaccga
ggcaacaagtccctgcaggggaggccagctttccccagctatgttcaagacagcagcccc
tacccagggcgctactctggtgaggaggggcttcagacctggggcagcccacagccacca
cctccgcagccacagcctctgccaggggcagtgagcaagtacgaggagaacttgatgaag
aagacagtggtgcctccaaacaggcagtaccctgagcagggcccccaacttcccttccgg
actcacggcctgcatgtcccaccaccgcagcctcagcagcccctggcttaccccaaactc
caaaggcagaaaccacagaatgaccttgcctcccctctgcccttcccccagggcagccac
tttccccagcattcccagtccttccctacctcctccacttatgccccaacagtgcagggt
ggtgggcagggggcccactcatacaagagctgcacagcaccatctgcccagcctcatgac
aggccgatgagtgccaatgcgagcctggctccagggcaacgggtccagaatcttcacgct
taccagccgggccgccttggctatgagcagcagcagcaagcacttcaaggccggcaccac
acccaggaaacactccactaccagaacctcgccaagtaccaacactatggacagcaaggc
cagggctactgtccagcggacacagctgtcaggactccggaacagtattaccagaccttc
agccctagctccagccactcccctgcacgctccgtgggtcgctccccttcctacagctcc
accccgtcaccactgatgcccaatctggagaacttcccttatagccagcagccgcttagt
actggggccttccccacaggcatcacagaccacagccactttatgcccctgctcaacccg
tccccaacagatgctgccagctctgtggacccccaggtcagcaactgcaagcccctgcaa
aaggagaagcttcctgacaacttgctgtcagatctcagcctgcagagtctcacagcgctc
acctcacaggtagaaaacatctccaatactgtgcaacagctcttgctgtccaaagctacc
ataccacagaagaaaggggtcaagaaccttgtgtctaggactccagagcagcacaaaagc
cagcattgtagcccagagggcagtggctactcagctgagccagcaggcacaccactgtct
gagccaccaagtagcacaccacagtccactcatgctgaaccacaagacactgactacctg
agtggctctgaggacccactagagcgcagcttcctctactgcagccaggcccggggcagt
cctgccagagtcaacagcaactctaaggccaagcctgagtctgtgtccacctgttctgtg
acctcacctgatgacatgtccaccaagtctgacgactctttccagagcctgcacagtact
ctgccactggatagcttctccaaatttgtggcaggcgagcgggactgtccacggctgctg
ctcagtgccctggcacaggaagatctggcctctgagatcctgggactgcaggaagccatt
gttgagaaggctgacaaggcctgggctgaggcttccagcctgcccaaggacaatggcaag
ccacccttctcactggagaaccacagcacttgcctggacactgtggctaagacatcatgg
tcacagccgggggagccagaagccctacctgagcccctgcagctggacaaggggggcagc
accaaggacttcagcccggggctatttgaagacccctctgtggcctttgccaccactgac
ccgaagaaaacaaccagtcccctgtcctttggcaccaaacctttgcttgggactgccact
cctgaccccaccacggcagcatttgactgctttccagatacaaccactgccagctcagtg
gatggtgccaacccctttgcctggccagaggagaacctgggcgatgcttgtcctcgctgg
ggcctccaccctggtgagcttaccaagggcttggagcagggtgcaaaagcctcagacagt
gtgggcaaggcagatgcacacgagacctctgcctgcttgggcttccaggaagagcatgcc
atcgggaagccagcagctgcactgtctggggacttcaagcagcaggaggcagatggggta
aaagaggaagtgggtgggttgctgcagtgccccgaggtgggcaaggccgaccagtggctg
gaggatagccggcattgctgttcctccgctgactttggggacctgccactgttgccaccc
cctggcaggaaggaggatctggaagctgaagaggaatactcttcgctatgtgaactgctg
gggagccctgagcagaggcccagcctgcaggacccactgtcccccaaggcccctctgatt
tgtaccaaggaggaagcagaggaggtactagataccaaggctggctgggcctctccgtgc
cacctctctggggagcccgcagtccttctgggcccctccgtgggtgccgaatcaaaggtc
caaagctggtttgaatcttccctgtcacatatgaagccaggagaagggccagagctggag
agagctccaggtagcgccagcacttcacagggctccttggccccaaagcctaacacgccc
gccgtacccgagggacccattgcgaagaaagagcctgtgccacggggtaaaagtttacgg
agccggcgagtacaccgggggctgcctgaggcggaagactctccatgcagggcgccagca
cttcccaaagacctcttgctcccagagtcctgcacggggcccccacagggtcaggcagag
ggggccggggccccaggccggggactgtcagaagggctccccagaatgtgtacccgttct
ctcacagctctgagtgagccccaaactcctggacctccaggcctgactaccacccccaca
cctcctgacaaactgggaggaaaacagcgagctgccttcaagtctggtaagcgggtagga
aaaccgtcacccaaggctgcatccagccccagcaaccctgctgccctgcctgttgcctca
gacagcagccccatgggctccaaaaccaaggagccagactctcccggcatgcctggcaag
gaccagcggtccatggtcctccggtctcgcaccaaaccccagcaggtcttccatgccaaa
cggcggcggccctcagagagcaggatcccagactgccgtcccaccaagaagccccctgct
aacaaccatttacccactgcattcaaggtctccagtgggccccagaaggaaggtcggatg
agccagcggggcaaagtacccaagcccggtacagggagcaagctttcagataggcctctc
cacacactcaaaaggaagtcagctttcatggcacctgtccctgccaaaaagcggagcctc
atcctgcgaagcaacaatggaagtggggtagatgggagggaggaaagggctgagagctcc
cctggcctcttaaggaggatggcctcaccccagagggccagacccaggggcagtggggag
ccacccccacccccacccctagagccacctgctgcatgcctggggttggctacacaatca
tccctgcccagtgctgtgaggaccaaggtgctgccaccccgaaagggccgtggcctcaag
ctggaggccatagtacagaagatcacctcacctggtctcaagaaacttgcatgcagagtg
gcaggggcccctcctgggacaccccggagccctgccctacctgagaaacgttcagggggc
agtccagctggggcagaagagggtgtaggaggaatgggtgcagggcaaatgctaccagca
gcttcgggagctgacccattgtgcagaaacccagccagcagcaggtccctaaaaggtaaa
ctcttgaatagtaagaagctgtcctctgctgctgactgccccaaagctgaggccttcatg
tccccggagaccctcccatccctagggactgcccgggcaccgaagaaaaggagccggaaa
ggcaggactggggccttgggaccctccaaaggtccattggagaagcggccctgtcctggc
caagctctgatcctcgctccccacgacagggccagcagcactcagggcggaggtgaggac
aactccagtggaggaggcaagaagccaaagacagaggagctgggactggcctcccagccc
ccagaaggccggccctgccagccccagacaagggcacagaagcagccaggccaagccagc
tatagcagctattcaaagcggaagcgcctcagccgtggccgaggaaaggccacccatgct
tcaccctgtaaaggccgtgccactcggagaaggcagcagcaggtactgcccctggatcct
gcagagcctgaaatccgactcaaatacatttcttcttgcaagaggctgagggcagacagc
cgcaccccagccttctcgccctttgtgcgggtggagaagcgagatgcatacaccaccata
tgcactgttgtcaactccccaggggatgagccgaagcctcactggaagccatcctctgtt
gcctcctcttccacctcctcctcagaaccagctggggcttctctgaccacattccctgga
ggctctgtgctacagctgaggccctccctgcccctctcctccaccatgcatctggggccg
gtggtgtccaaggccctaagtacctcttgccttgtctgctgcctctgccaaaacccggcc
aatttcaaggaccttggggacctctgtggtccctactaccctgaacactgcctcccaaaa
aagaagccaaaactcaaggagaaggtacggctggagggcaccttggaggaggcctctctg
cctctggagagaacactcaaaggcctggaatgtgcagccagcaccacggctgccacccct
accacaaccaccatcactaccaccacaaccctggggaggctgtccaggcctgatggccca
gccgaccctgccaagcagggttccctgcgcaccagtgcccggggcctgtcaaggcggctg
cagagttgctattgctgtgatggtcagggggacgggggtgaggaggtggccccagctgac
aagagccgcaaacatgaatgcagcaaagaggcccctgcagaacctggtggggacacccaa
gagcactgggtacatgaggcctgtgctgtgtggaccagcggggtgtacctggtggccggg
aagctctttgggctgcaggaggccatgaaagtagctgtggacatgccatgtaccagctgt
catgagtccggagcaaccatctcgtgctcctatgaaggctgcacccacacctaccactac
ccatgtgccaatgacacaggttgcacgttcattgaggagaattttactttgaagtgcccc
aaacataagaggctgccgttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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