KEGG   Rattus norvegicus (rat): 303214
Entry
303214            CDS       T01003                                 
Symbol
Trim16
Name
(RefSeq) tripartite motif-containing protein 16
  KO
K12006  tripartite motif-containing protein 16
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    303214 (Trim16)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    303214 (Trim16)
SSDB
Motif
Pfam: SPRY PRY zf-B_box
Other DBs
NCBI-GeneID: 303214
NCBI-ProteinID: NP_001128505
RGD: 1309749
Ensembl: ENSRNOG00000003287
UniProt: D3ZW47
Position
10:47985235..48008242
AA seq 557 aa
MAELDLIAPGPLTGVTVHPLAPLGPDPGSAIPIGKEDVDLLSKPGEETQGQGDLAKLGAP
GDEEEGQILCDFCLGASRVRAVKSCLTCMVNYCEEHLRPHQENSKLHSHQLTEPTKDQDL
RTCPAHHSPLVSFCHTHQQCICQECGTGEHRGDSTVSLDAARRSKEADLRCMQLDLEQKL
KLNENAIARLQANHKSVLVSVSEVKVVAEEKFGELLAAVRKAQTDVMLFLEEKEQAALNQ
VNGIKTHLEHRSIEMEKNKQELEKLASISNTVLFLEEYCKLKKTEDTAFPSVYIGLKDKL
SGIRKVITESTLNLIQLLESYKEKLQEFSREEEYDIRTQVSAIVQRKYRTSKPEPRTRDE
FLQYACDITFDPDTAHRYLRLQEDNRKVTNTTPWEHPYPDLPSRFLHWRQVLSQQSLYLH
RYYFEVEISGGGIYVGLTCKGIDRKGEERNSCISGNSFSWSIHWSGKEFTAWHSDTETPL
KASPFRRLGIYVNFPGGTLSFYGVEYDAMTLIQKFDCKFSEPLYAAFWLSKKENTIRIVD
LGEEPEKPAVPSVEAAP
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggctgaattggatctaattgccccagggcctctgaccggggtcactgttcaccctttg
gctcctctcggcccagaccctgggtcagctattccaataggaaaagaagatgtggacctt
ctcagcaagccaggcgaggaaacccaggggcagggtgacctcgcaaagctcggggctcct
ggtgatgaagaggagggacagatcctgtgtgacttctgtcttggggccagcagagtaagg
gctgtaaagtcctgtttgacctgcatggtgaattactgtgaggagcacctgcggccacac
caggagaacagcaaactgcacagccaccagctaaccgagcccacaaaagaccaggatctg
cgcacctgccctgcccaccacagccctttggtttccttctgccacacgcaccagcagtgt
atctgccaggaatgcggcacgggtgaacacagaggcgacagcactgtctccctggatgca
gcccgcaggagcaaagaggctgaccttcggtgcatgcagctggacctggagcagaagctc
aagttgaacgaaaatgccattgcccggctccaagccaaccacaagtctgttttggtgtcc
gtgtcagaggtgaaggtggtggctgaagagaagtttggggaactcctcgcagccgtgagg
aaggcccagactgatgtgatgctcttcttagaggagaaagaacaggctgcactgaatcag
gtcaacggcatcaagacccacctggagcacaggagcatcgagatggagaaaaacaagcag
gagctggagaagttggcctccatcagcaacactgtgctcttcctggaggagtactgcaag
cttaagaagacagaggacactgccttccccagcgtttacatcgggctgaaggataaactc
tcaggcatccgcaaggtcatcacagagtcaactctgaacttgatccagttgctagaaagc
tataaggaaaagcttcaggaattttccagggaagaagaatatgacatcagaactcaagtg
tctgccattgtccagcgcaagtacaggacctcgaaacccgagcccagaacccgggatgag
tttcttcaatatgcctgtgacatcacatttgacccagacacagcacacaggtaccttcgc
ctgcaggaggataaccgcaaggtcaccaacaccacaccctgggaacacccttacccagac
ctccccagtaggtttctgcactggcggcaggtgctgtcccagcagagtctgtacctgcac
aggtattattttgaggtggagatctctggaggaggcatctatgttggcctgacctgcaaa
ggcatcgaccgtaagggggaagaacgaaacagctgcatttctggaaacagcttctcctgg
agcattcactggagtgggaaggagttcacggcctggcacagtgacacagagactccgctc
aaggccagccccttcaggaggcttggcatctatgtaaatttcccaggaggaaccctttcc
ttctatggtgtagaatatgatgccatgactctgattcagaagtttgactgcaagttctca
gagccactctatgctgctttctggctgtctaagaaagaaaacaccatccggattgtggat
ctgggagaggagcctgagaagccagctgtaccctcagtggaggctgctccctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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