KEGG   Rattus norvegicus (rat): 303238
Entry
303238            CDS       T01003                                 
Symbol
Ctc1
Name
(RefSeq) CST complex subunit CTC1
  KO
K23311  CST complex subunit CTC1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rno03032]
    303238 (Ctc1)
DNA replication proteins [BR:rno03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomere proteins
    CST complex (animals)
     303238 (Ctc1)
SSDB
Motif
Pfam: CTC1 CTC1_2 CDC24_OB3
Other DBs
NCBI-GeneID: 303238
NCBI-ProteinID: NP_001100480
RGD: 1563106
Ensembl: ENSRNOG00000005357
UniProt: A6HFM6
Position
10:54212537..54234146
AA seq 1211 aa
MAACRAQPPTSEEAWLEAAQAFIQETLCPVDEEPNEQVTRSVIDCVKETWLSQGENQDLT
LPLSYSFVSVQNLKTNQHLPCCSHLSWSDNAYQAWTRGAGPGGSVLPREQLLLLGTLVDL
LGDLEQESRSGGLYVRDNTGTLDCELIDLDLSWLGHLFLFPSWSYLPPAKRNSLGAGHLE
LWGTPVPVFPLTVSPGPLTPIPVLYPEKASYLLRYRKKCKIKELNLAGKLVHLSALMVTQ
NKRYFIMTLGELAQAGSQVSVIVQIPAQMVWHRVLRPGRAYVLTKLRITKTRGHRSCIWT
TIPSSTLMPLRPGYVQELELDVAFADAGHKPLPEPTSSRDSRGQEGLVRGSKVLHYLGTV
TDVLNESASLYILDGQLILCLAYQKIHGLRRVIRPGVCLELRDVHLLQGLGGGTTKPVLA
LCLHGTVRLQGFSCLKPQNLPSYKVHGASLYEQLVWKCQLGLPLYLWATKALEELVYKLC
PHVLRCQQFLKHSSPGKPSLGLQLLAPSWDVLIPPGSPIRHAHSEILEEPHNCPLQKYTP
LQTPYTFPTILALAEEGQHRAWATFDPRALLPFPEAFHLTSCQLNRRLAWSWLCLPSSMF
QPAPVLLGVLVASSHKGCLQLRDVRGSLPCIPLPESSQPLIDPKLIGCLVRVEKFQLVVE
REVRSSFPSWEELGMASLIQKKQARVYVQFYLADALILPVPRPTVGLEPSETASSCPEGP
QVGQSRLFLLFYKEALMKRNFCLLPGDSSRPAEPTLSFRVSGTWLCGTQKREGSGWSPPE
SLAAENKDQKVFFIFLGSSVQWFPFLYPNQVYRLVAPDSTPALFETNHSSGTPHRPLELT
DYVSCLTIQEDWTLELGSSQDIPNVLEVPRTLSESSLAHLLSDNSPNFLVSFSAEVLSRI
LCEPPLALRRIKPGNAGAIKAGVKLTVALEMEDCDYPPHLDIYIEDPHLPPPIGLLPGAR
VHFSQLEKKISRSNVVYCCFRSTTSVQVLSFPPETKASAPLPHICLAELLQGDRPPFQAT
TSCHIVYVLSLQILWVCAHCTSICPQGKCSRQDPSCPSQRAISQASIRLLVEDGTAEATV
TCRNHHVATTLGLSPSEWSNVLDRARGPGRVALQFKGPGAQTESASKTGEPLTLLLQTLC
TSPFVLRPIKLSFALERRPCDITPIEPPRLQQFQCGELPLLTRVNPRLRLVCLSLQEPEL
PSPPQASAAAS
NT seq 3636 nt   +upstreamnt  +downstreamnt
atggctgcttgccgagcacaaccacctacctccgaggaagcctggcttgaggctgcccag
gccttcatccaagagaccctttgtccagtggacgaggagcctaatgaacaggtgactcgc
tcagtaattgactgtgtgaaggagacatggctgtcccagggggagaaccaggacttaacc
ttgcccctcagctacagctttgtctcagtacagaatctgaagacgaatcagcatctccca
tgctgcagccacctgtcctggagtgacaatgcttaccaggcttggacccgaggagctggg
ccaggaggcagtgtcctgccccgggaacagctgttacttttagggacactagtagaccta
ttaggagatttggaacaagagtctaggagtggaggcctgtatgtgagagataacactgga
accttggactgtgagcttatagatctagacctttcttggttgggccatctcttcctgttc
cccagttggagttacctccctcccgccaagaggaattccttgggggcagggcacttggag
ctgtggggtacacctgtgccagtatttcctttgactgtcagtcctggccccctcacgcct
atccctgtcctctacccagaaaaggcgtcctacctgctcagatacagaaagaaatgcaaa
ataaaggagctaaatcttgctggaaaactggtccatctgagtgccctgatggtaactcag
aacaaaaggtacttcatcatgacacttggtgaattagcccaagctggcagccaggtgtcc
gtcattgtccagattcctgctcagatggtgtggcaccgagtcctccggcctggtagggcc
tatgtgctgacaaaattgcgaataaccaagacccggggtcaccgttcctgtatttggaca
accattccatcttcaactctgatgccactgagaccaggctatgtgcaagagctggagctg
gacgtagcgtttgcagacgctggccataaaccgctgcccgagcccaccagctccagagac
agcagaggccaagaggggcttgtccgaggttccaaagtcttgcattatttgggaacagtc
actgacgtgttgaacgagtctgccagcctctacattcttgatgggcagctgattctctgc
cttgcataccagaagatccatggcctcaggcgggttattcgaccaggggtctgtctggag
ctccgtgatgttcatctcctccagggcctgggtggaggaacaacaaaacctgtgctggcc
ctttgtctccatggcactgttcgcctgcaaggcttttcttgtcttaagcctcagaacttg
ccgtcctacaaagttcatggtgcctccttgtatgagcaattggtgtggaaatgtcagtta
ggacttcccttatacttatgggctaccaaggccctggaggagctggtctacaagctctgt
ccccatgtgttgagatgtcaacagttcctgaagcactcctctcctgggaagcccagcttg
ggactgcagctcctggctccctcctgggatgttcttattccacctggcagccccattcgg
catgcacacagtgagatcctggaagaaccacataactgtccccttcagaagtatactccg
ctgcagaccccctacactttccctactatacttgccctggcagaggaagggcagcacagg
gcttgggctacctttgacccaagggccctgctgcctttcccagaagcctttcacctgaca
agctgtcaactgaatcgtcgcctagcctggtcctggctctgtctgccatccagtatgttc
cagccagccccggttttacttggggtcctggtggcttcgtctcataaaggttgtctgcag
cttcgggacgtaagaggttcactgccctgtatacccttgcctgagagttcacagcccctc
attgacccaaagctcataggctgcctggtgcgggtagagaaattccagctggtagtagag
agagaagtcaggagcagcttcccttcctgggaggagctgggcatggcaagcctcatccag
aagaagcaggccagagtctatgtccagttctacctggctgatgccctgatcctgcctgtg
cccagacccactgttggtttagaaccatctgagacagcctcctcctgcccagagggaccc
caggtgggacagagccggctgttcttactgttctacaaggaggccctcatgaaacgtaac
ttttgtctccttccgggagatagttcacgacctgcagagcccaccctgagtttccgtgtg
tcaggaacttggctttgtggcacacagaagagggagggttctggatggagcccacctgag
tctctggccgcagagaacaaggaccaaaaggtcttcttcatcttccttggctcttcagtt
cagtggtttccgttcttgtacccaaaccaagtctaccggctcgtggctcctgactcaaca
ccagcgttgtttgagacaaaccattcatctggcacacctcaccgtcctctggaattgact
gactatgtgtcttgcctcactatccaagaggactggaccctggaacttgggagctctcag
gacatacctaatgtactagaggtccctagaacactgtctgagtcctcactggctcacctg
ctcagtgacaactcccccaatttcttggtgtctttctctgctgaggttttgtctcggata
ctgtgtgaaccacctctggcccttcgcaggataaaacctgggaatgctggggctattaaa
gcaggtgtgaagctaacagtagctctagaaatggaggactgtgactatccccctcacctg
gacatatatatcgaagatccacacttgcctcccccaataggactccttccaggagcccga
gtccactttagccagctggagaaaaagatttccagatccaacgttgtttactgttgcttc
cggtcaaccacttctgtgcaggtcctgagcttccccccagagaccaaagccagtgctccc
ttgccccacatctgcctggctgaacttctccaaggtgaccggcctcccttccaggccact
acctcttgccatattgtgtatgtcctgagccttcagatcctgtgggtgtgtgcccattgc
accagcatctgtccccaggggaagtgtagtcgtcaggaccccagttgtccatctcagagg
gctataagccaggccagcatcaggctcctggtagaagatggcaccgcagaagccacagtg
acctgtaggaatcatcatgtggcaacaacactaggactgagtcctagtgagtggtccaat
gtcctagatcgtgcaagggggccagggagagtggccttgcagtttaaagggccaggagcc
caaacagagtctgcaagcaaaaccggtgaacccttgaccctgctcctccagacactttgt
accagcccctttgtcctccgacccattaagctttcctttgcgcttgaaaggagaccttgt
gatattaccccaatagaaccaccccggctgcagcagttccagtgtggagagctccctctg
ctgaccagagtgaatcccaggctccgattggtctgcctttctctgcaggagccagagctc
cccagccctccacaagcttctgctgctgcttcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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