KEGG   Rattus norvegicus (rat): 303281
Entry
303281            CDS       T01003                                 
Symbol
Supt6h
Name
(RefSeq) transcription elongation factor SPT6
  KO
K11292  transcription elongation factor SPT6
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    303281 (Supt6h)
   03036 Chromosome and associated proteins [BR:rno03036]
    303281 (Supt6h)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     303281 (Supt6h)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     303281 (Supt6h)
SSDB
Motif
Pfam: SH2_2 YqgF HHH_7 HTH_44 SPT6_acidic Spt6_S1 HHH_3 S1 Tex_N HHH_9 SH2 Tex_YqgF
Other DBs
NCBI-GeneID: 303281
NCBI-ProteinID: NP_001178749
RGD: 1309290
Ensembl: ENSRNOG00000012240
Position
10:complement(63601990..63638851)
AA seq 1726 aa
MSDFVESEAEESEEEYNHEGEVVPRVTKKFVEEEDDGEEEEEENLDDQDERGNLKDFIND
DDDEEEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDDEDDEEEYGKEEHEKEAIAGEIFQDEEGEEGQEAVEAPMAPPDEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEDY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKAAEDDELEEEADWIYRNAFATPTISLQDSCDYLDRGQPTSSFSRKGPSTVQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKIGLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEARESVVKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
VNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSTQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq 5181 nt   +upstreamnt  +downstreamnt
atgtctgattttgtggaaagtgaggctgaagagtcagaagaagaatacaatcatgaaggc
gaggtggtacctagagtcaccaagaagtttgtggaagaggaggatgatggtgaggaggag
gaagaggagaatctagatgatcaagacgagcgaggcaacctgaaagactttattaatgat
gatgatgatgaagaggaaggagaggaggatgaaggcagtgactctggtgactcagaagat
gatgttggccacaagaagagaaaacgcacatcctttgatgaccgcctggaagatgatgat
tttgacctcattgaggagaatttgggtgttaaagtcaaacgaggacaaaaataccgacgt
gtcaaaaaaatgtctgatgatgatgaagatgatgaagaggaatatggcaaagaggaacac
gagaaggaggccattgcaggggaaatcttccaagatgaagaaggggaagaagggcaggag
gctgtagaggcccctatggctcctccagacgaggaggaggaagatgatgaagagtcagat
attgatgatttcattgtggatgatgatggacagcctctgaaaaaaccgaaatggcgaaaa
aagcttcctggatatacagatgcagccctgcaggaagcccaggagatcttcggtgtggac
tttgactatgatgaatttgagaaatacaatgaatatgatgaagaactggaggaagactat
gagtatgaggatgacgaggctgaaggtgagatccgagtgcgccccaagaagaccaccaag
aagcgcgtaagtcgcaggagcatctttgagatgtatgagccaagtgaactggagagcagt
cacctcacagaccaggacaatgaaatccgagccactgacctgcctgagaggttccagctc
cgctccatcccagtcaaggcagctgaagatgatgagctagaagaagaagctgactggatc
tatagaaatgcctttgcgacaccaaccatctccctccaggacagctgtgattacctggac
cgtgggcagccaactagtagcttcagtcggaaagggcccagcacagttcagaagatcaaa
gaggccctgggcttcatgcggaatcagcattttgaggtacctttcattgccttctaccga
aaggagtacgtggagcccgagttgcacatcaatgacctgtggagggtgtggcagtgggat
gagaagtggactcagctgagaatccgcaaagagaacctaacacggctgtttgagaagatg
caggcttatcagtatgagcaaatttctgctgaccctgataaacctcttgctgatggcatc
cgggctttagatactactgacatggagaggctcaaagatgtgcagtcaatggatgaactg
aaagatgtctacaaccatttcttactttactatggccgtgacatccccaagatgcagaat
gccgccaaggctagccggaaaaagctaaaacgcataaaggaggatggcgatgaagaaggt
gaaggtgaggaggctgaagatgaggagcagaggggaccagagctcaagcaagcctcccgc
cgagacatgtacaccatctgccagagtgccggactagatggcctagccaaaaagtttggc
ctcacacctgagcagtttggggagaacctccgtgacagctaccaacggcatgagacagag
cagttccctgcagaacctttggagctggccaaggattacgtttgcagccagttccctaca
ccagaagctgtgcttgaaggtgcccgatacatggttgctctacagattgcccgggagccc
cttgtcagacaggtgctgagacaaacctttcaggagagagctaagctaaacataacccca
accaagaaaggtagaaaggatgtggatgaggcccactatgcttattcttttaagtactta
aagaacaagcctgttaaagagctaagagacgaccaattcctcaagataggcctggctgaa
gatgaaggcctgctcaccattgacatcagcatagacatgaagggagtggaagggtatggt
aatgaccagacatactttgaggagatcaagcagttttactaccgggatgagttcagccat
caagtccaggaatggaaccggcagcgcactatggccattgagcgagctctgcagcagttc
ctctatgtgcaaatggccaaagaacttaagaacaaactgctcgctgaggccagggagagt
gttgtaaaggcctgtagccgaaagctctacaactggctgcgagtggcgccctaccgacca
gatcagcaggtagaggaggatgacgactttatggatgaaaaccaggggaagggcattcga
gtcttaggcattgctttctcctctgccagagaccaccctgtgttctgtgccctagtcaat
ggtgaaggagaagtgactgatttcctccgtctgccccattttaccaaacggcgaactgcc
tggagggaagaggagcgggaaaagaaggctcaagatattgagactctaaagaagtttctt
gtgaataagaagcctcatgtagttactgttgcaggagaaaacagggatgcccagatgttg
attgaggatgtgaagcgcatagtgcatgagctggaccaaggccaacagctttcttctatt
ggggtggagctggttgacaatgagttggccattctgtatatgaacagcaaaaaatcagag
gcagagttccgtgattatccaccagttttgagacaagcggtttctctagcccggcgcatt
caagaccctctgatagaatttgcccaggtgtgcagctctgatgaagacatcctatgtctc
aagtttcatcccttgcaggagcatgttgtgaaagaggagctgctcaacgccttgtactgt
gaattcatcaatcgggtcaatgaggttggggtcgatgtcaaccgtgccattgcccatcct
tacagccaggccttgatccagtacgtctgtggcctgggacctcgaaaagggacccacctg
ctgaagattttgaaacagaacaacactcgactcgagagccggactcagctggtcaccatg
tgtcacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagatcgacactgcc
tctctgggggacagcactgactcatacattgaagttcttgatggttctcgagtccaccct
gaaacatatgagtgggccagaaagatggcagtagatgccttggaatatgacgagtctgca
gaggacgccaatcctgcaggagcccttgaggaaatcttggaaaacccggagcgactaaag
gatttagaccttgatgcctttgcagaagaactagagagacagggctatggtgacaaacac
atcacactctatgacatccgagcagagctcagttgtagatataaggacctccggacggcc
taccgctctcctaacacagaggagatcttcaatatgctaaccaaagagacaccagagacc
ttctacattggaaagctcatcatctgtaatgtcacgggcatcgctcacaggcgcccacag
ggtgagagctatgaccaggccatccgaaatgacgagacagggctgtggcagtgccccttc
tgtcaacaggacaacttccctgagctgagtgaggtctggaaccattttgacagtggatcg
tgccctggccaggccattggcgtgaaaacacggctagacaacggcgtcactggcttcatc
cctaccaaattcctcagtgacaaggtggtgaagaggccagaggagcgtgtgaaggtgggg
atgactgttcactgccgcatcatgaagatcgatattgaaaagttcagtgcagacctgacc
tgccggacctcagacctcatggacaggaacaatgagtggaaactgcccaaggacacctac
tacgacttcgatgccgaagccgcagaccacaagcaggaggaggacatgaagcgaaagcag
cagcggaccacatacatcaagcgagtgattgcacacccgtccttccataacataaatttt
aagcaagcagaaaagatgatggagacaatggaccaaggggacgttatcattcggccgagc
agcaagggggagaaccacctgacagtgacctggaaagtcagtgacggcatctaccagcat
gtggatgtgcgagaggagggcaaggaaaatgccttcagcctgggagccactctgtggatc
aacagtgaggaattcgaagacttggatgagattgttgcccgctacgtccagcccatggct
tcctttgctcgagaccttctgaaccacaagtattaccaggactgtagtggtggggaccga
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttac
ttcatctgtgcctgcaaggaactgcccggcaagttcctcctgggataccagccccggggt
aaacccaggatagagtatgtaacagtgactcctgaaggattccggtaccggggccagatt
ttcccaactgtgaatggactcttccggtggtttaaggatcattatcaggatcctgtacca
ggcattactcccagtagcagcagcagaacacggacccccgcttctatcaatgctacccca
gccaacatcaatcttgcagatctgacacgggctgtgaatgccttgcctcagaacatgact
tcacagatgttcagtgccattgctgctgtgacaggccaaggacagaaccccaatgctacc
ccagcccagtgggcatccagccagtatggctacggtggcagtggaggaggcagtagcgcc
taccatgtgttcccaacgccagcccaacagccagtggccacaccactaatgaccccgagc
tactcctatacaaccccgagccagcccattaccaccccacaataccaccagctccaggcc
agcactaccccacagtctacccaggcccagccccagccttcctccagctcccgacaacgg
caacagcagccaaagtccaacagccatgcagctatcgattggggcaagatggccgagcag
tggctacaggaaaaggaggcagaacgacggaaacagaaacagcggctgaccccaagaccc
tctcccagccccatgatcgagagcacccccatgtccattgctggcgatgcgaccccactc
ctggacgagatggatcgatag

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