KEGG   Rattus norvegicus (rat): 303384
Entry
303384            CDS       T01003                                 
Symbol
Mmp28
Name
(RefSeq) matrix metalloproteinase-28 precursor
  KO
K08006  matrix metalloproteinase-28 (epilysin) [EC:3.4.24.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    303384 (Mmp28)
Peptidases and inhibitors [BR:rno01002]
 Metallo peptidases
  Family M10
   303384 (Mmp28)
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Reprolysin_4 DUF4953 Reprolysin_5 Peptidase_M66 Metallopep Reprolysin_3 Reprolysin_2 Peptidase_M54 Peptidase_M57
Other DBs
NCBI-GeneID: 303384
NCBI-ProteinID: NP_001073357
RGD: 1311573
Ensembl: ENSRNOG00000047940
Vega: OTTRNOG00000000504
UniProt: A1EC81
Position
10:complement(68738651..68762377)
AA seq 525 aa
MVTGLSLLLRVLPLLLWGCQDAQPTPRGHPELHQEAEAFLEKYGYLSEQGSKVPASTQFS
DAIREFQWVSQLPISGVLDRATLRQMTRPRCGVADTDSHETWTERIRALLAGHRAKMRRK
KRFAKPGHKWYKQHLSYRLVNWPKSLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPAD
IRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRRGRNLFVVLAH
EIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQNLYGKPLGRSVATQLPGKIF
TDFEAWDPHNSQSRRPETRGPKYCHSSFDAITVDGQWRLYVFKGSHFWEVTADGNVSEPH
PLQKRWPGLPSSIEAAAVSLEDGDFFFFKGNRCWRFQGTKSVFAQLCRAGGLPRHPDAAL
FFPPLRRLVLFKGSRYYVLARGGMQVEPYYPRSLRDWAGVPEEVSGALPRPDGSIIFFRD
DHYWHLDQAKLRVTSSGRWATELSWMGCWNANSGGALFQRLPVTE
NT seq 1578 nt   +upstreamnt  +downstreamnt
atggtgactggcttgagcctcctgctgcgcgtcctgccgctactgctgtggggctgccag
gacgcacagcccaccccgcgcggacacccggagctacaccaggaggcagaggcattcctg
gagaagtatggatacctcagtgagcagggttccaaagttccagcctccactcagttcagt
gacgccatccgagagttccagtgggtatcccagctgcccatcagcggtgtgctggaccgg
gccacactgcgtcagatgacacgcccacgctgtggggtcgcagataccgacagtcacgaa
acttggacagagaggatccgtgccctgcttgctggacaccgcgccaaaatgaggcgtaag
aaacgctttgcaaagccaggtcacaaatggtacaagcagcatctttcctaccgcctggtg
aactggcccaagagcctgcctgagccagctgtgcgaggggctgtccgtgccgccttccag
ctatggagtaatgtgtcagcgctggagttctgggaggccccagccacaggccctgctgac
atccgcctcaccttcttccaaggagaccacaatgatgggctggccaacgccttcgatggc
ccagggggcgccctggcgcacgccttcctgccccgccgaggcgaagcgcatttcgaccaa
gacgagcgttggtctctgagtcgccgccgtgggcgcaacctgttcgtggtgctggctcac
gagatcggccacacgctcggtctcacgcactcgcccgcgccacgtgcgctcatggcgccc
tactacaagaagctgggccgtgacgccttgctcagctgggacgatgtgctggcggtgcag
aacctgtacggaaagcccctaggacgctcagtagccacccaactccctggaaagatattc
actgactttgaagcctgggacccccacaactctcagagcagacgcccggaaaccagagga
cctaaatactgccactcttcctttgatgccatcactgtagatgggcaatggcgactgtac
gtcttcaaagggagccacttctgggaagtcacagctgatggcaatgtttcagagcctcat
ccactacagaaaagatggccgggactgccctctagtattgaggctgctgcagtgtctctg
gaagatggagacttcttcttcttcaaagggaatcgctgttggaggttccaaggcacgaag
tccgtgttcgcacagctctgccgggcaggtggtctgccccgacacccagacgcagctctc
ttcttcccgcctctgcgccgcctagtcctcttcaagggttcccgctactacgtgctggct
cgaggagggatgcaagtggagccctactatccccgcagtctgagggactgggctggggtc
cctgaggaggtcagcggcgccttgccaaggccggacggttccattatcttctttagagat
gaccactattggcacttggatcaagccaaactgcgggtgaccagctctggccgctgggcc
accgagctgtcctggatgggctgttggaatgccaactcaggaggtgccctgttccaaagg
ctccccgtcactgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (12)   
   Pfam (12)   
All databases (29)   

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