KEGG   Rattus norvegicus (rat): 303403
Entry
303403            CDS       T01003                                 
Symbol
Med13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
  KO
K15164  mediator of RNA polymerase II transcription subunit 13
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04919  Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    303403 (Med13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    303403 (Med13)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    CDK-module
     303403 (Med13)
SSDB
Motif
Pfam: Med13_C MID_MedPIWI
Other DBs
NCBI-GeneID: 303403
NCBI-ProteinID: NP_001402014
RGD: 1304829
Ensembl: ENSRNOG00000003679
Position
10:complement(71584354..71674614)
AA seq 2171 aa
MSSSFVSNGASLEDCHCNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLGVWRRDQRPGRRELWIFWWGKDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYLLSEEHVTLAQQSNSPFQVILSPFGLNGTLTGQAFKMSDSATKKLIGEWKQFY
PISCGLKEMSEEKQEDMDWEDDSLAAVEVLVAGVRMIYPACFVLVPQSDIPTPSSVGSSH
CSASCLGIHQVPASTRDPAMSSVTLTPPTSPEEVQSVDPQSAQKWVKFSSVSDGFSTDST
SHHGGKIPRKLANHVVDRVWQECNMNRLQNKRKYSATSSGLCEEETADKIGSWDFVEATQ
RTSCSCLRHKSLKTRNTGQQGQAPSLGQQQQILPKHKTNEKQEKSEKPQKRPLTPFHHRV
SISDDIGMDTDSASQRLVISAADSQVRFTNIRTNDVAKTPQMHGTELANSPQPPPLSPHP
CDVVDEGVTKTPSTPQSQHFYQMPTPDPLVPTKPMEDRIDSLSQSFPPPFQEAVEPTVYV
GTAVSLEEDEANVAWKYYKVPKKKDVEFLPPQLPNDKFKDDPVGPFGQESVTSVTELMVQ
CKKPLKVSDEIVQQYQIKNQYLSAIASDTEQEPKIDPYAFVEGDEEFIFTDKKDRQNSER
EAGKKHKVEDGTSAVTVLSHEEDAMSLFSPSKQDAPRPANHARPPSTSLIYDSDLAVSYT
DLDNLFNSDEDELTPGSKKSASGSDDKASSKESKTGSLDPLSCISTADLHKMYPTPPSLE
QHIMGFSPMNMNNKEYGSMDPTPGGTVLEGSSSSVGTQFRIEVEEGFCSPKPSEIKDFSY
VYKPENCQVLVGCSMFAPLKTLPSHCLPPIKLPEECVYRQSWTVGKLDLLPSGPSMPFIK
EGDGSNLDQDYGPAYTPQIHTSFGMPPSSAPPSNGGAGILPSPSTPRFPTPRTPRTPRTP
RGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESV
MNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNNSGLF
LEDELDIIGRNTDCGKEAEKRFEALRASSVENVNGSLKESEKVPDELILLLQDQCTNLFS
PFGAADHDPFPKAGISSNWVRVEERDCCSDCCLALEHGRQFMDNMSGGKVDEALVRSSCL
HPWAKQNDASVQCSQDILRMLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGS
YGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEAL
LNGARSFFRDLTAIYESCRLGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADG
NNEAFSKLKLYAQVCRYDLGPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANA
PSATLASAASSTMTLTPGVAISTSVATANSTLTTTSSSSSSSMSSGVSSNKLPSFPPFGS
MNTSGTGSMSAQGSTVQSGQLGGQQSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVG
IPTDGDSHAITYPPAIVVYIIDPFTYENKDESTSSSNVWTLGLLRCFLEMLQTLPPHIKS
TVSVQIVPCQYLLQPVKHDDRQIYSQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGPGLA
METALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWI
LASCTDLYGELLETCIINIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIG
RLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSF
VIMPDSVSTGSVFGRSTTLNMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDL
AFNPNNDGADGMGIFDLLDTGDDLDPDIINILPASPTTSPVHSPGSHYPHGGDAGKGQGT
DRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLH
VPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPAIQDRRSCLPIHFVVL
NQLYNFIMNML
NT seq 6516 nt   +upstreamnt  +downstreamnt
atgagttcctccttcgtgtcgaacggggccagcctggaagattgtcactgtaacctcttc
tgcctggccgacctgacaggaattaagtggaaaagatatgtatggcaaggcccaacttct
gcccctattctgtttccggtgacagaagaagaccccattttgagcagttttagtcgatgc
cttaaggcagatgtactcggtgtttggcggcgagatcaaagacctggaagaagagaattg
tggatattttggtggggtaaagatcccaattttgctgaccttattcaccatgacttatca
gaagaggaagatggagtatgggagaatggcctttcctatgaatgccgtactttgcttttc
aaagcagttcacaatctgttagaacgatgtttaatgaaccgaaactttgtacgaattggc
aagtggtttgtgaagccatatgagaaagatgaaaaacctataaataaaagtgaacacttg
tcctgctctttcacctttttcttgcatggagacagcaatgtttgtaccagtgtggaaatt
aaccaacatcaacctgtgtaccttctcagtgaagagcatgtcacccttgctcagcagtct
aatagcccatttcaagttatcttaagtccatttggactaaatggcactctcacgggacag
gctttcaagatgtctgattcagctacgaaaaaattaattggtgaatggaaacagttctat
cctatttcatgtggtttgaaggagatgtctgaagaaaaacaggaagacatggattgggaa
gatgattctttagctgcagtagaagttcttgttgcgggtgtccgaatgatctacccagca
tgttttgttctagtccctcaatcagacattcctacccctagttctgtgggatcctctcac
tgttcagcttcctgcttgggtatccatcaagtgcctgcttccacaagagatcctgctatg
tcttcagttactctcactccacccacatctcctgaggaagtccaatcagttgatcctcag
tctgcacagaagtgggtcaaattttcttcagtatccgatggcttcagcactgacagtact
agccatcatggtgggaaaataccaagaaaattagcaaatcatgtggtggatcgagtctgg
caagaatgtaatatgaacagattacagaacaagaggaagtattctgctacatccagtggc
ctgtgtgaagaagagacagctgataaaataggaagctgggactttgttgaagccacacaa
agaacaagctgtagttgtttgaggcataaaagtcttaaaacaagaaatactgggcaacaa
ggacaggcaccatctttagggcaacaacagcaaatacttcctaagcacaagaccaatgag
aagcaagaaaagagtgagaagccacaaaagcgccccttgaccccttttcaccaccgtgta
tcaattagtgatgatattggcatggacacagattcagccagccaaagacttgtgatctct
gctgcagatagtcaagtgagatttacaaacatccgaactaatgatgtagcaaagactcct
cagatgcatggcactgaactggcaaattcacctcagcctcccccacttagtcctcatcca
tgtgatgtggttgatgaaggagtgactaaaacgccttcaactccccagagtcaacatttt
tatcaaatgccaacaccggatcccttggttcctaccaaaccaatggaagataggatagac
agtttgtcccagtctttcccacctccatttcaggaagctgtagaacctaccgtgtatgtt
ggtacagcagtaagcttggaagaagatgaagctaatgtagcctggaagtattacaaagtc
ccaaagaaaaaagatgtagaatttttaccacctcaacttccaaatgataaattcaaggat
gatccagttggaccttttggacaggaaagtgtaacatcagttacagagttaatggtgcag
tgtaagaagcctttaaaagtttctgatgaaatagtccagcaatatcaaattaaaaatcag
tatctttcagcaatagcatctgatacagaacaagaacctaaaattgatccatatgcgttt
gttgaaggagatgaggaattcatttttactgataaaaaagatagacaaaatagcgagaga
gaagctgggaagaaacacaaggtggaagatgggacatctgctgtcacagtgttatctcat
gaagaagatgctatgtcattatttagtccctctaagcaagatgctccacgccctgctaat
catgcccgtcctccatcaaccagtttgatttatgactcagatctggctgtgtcttatact
gaccttgataacctcttcaattctgatgaagatgaattaacacctggatctaaaaaatca
gcaagtggatcagatgataaagccagctccaaagaatcaaagacaggaagcctggatccg
ttgtcttgcataagcactgcagaccttcacaaaatgtaccccacgcctccttcactggag
cagcacattatgggcttctctccaatgaacatgaataacaaggaatacggtagtatggac
cccacacctggaggaactgtgctggaaggaagtagctctagtgtaggaacacagttcaga
attgaggttgaggaagggttctgtagccctaaaccttctgaaattaaagatttttcttac
gtctataagcctgaaaattgtcaagttctagtaggttgttccatgtttgcacctttaaaa
actctaccaagccattgtctgcctcctatcaaattgccggaagagtgtgtttaccggcag
agctggactgttgggaaattggacttgcttccttcaggcccttcaatgccattcatcaaa
gagggtgatggcagtaatttggatcaagactatggtcctgcctatacaccacaaatccat
acatcttttgggatgcctccgagcagtgcacctcctagtaatggtggcgcaggaattctt
ccttccccatccacccctaggtttccgactccaagaactccaaggactccaaggactcct
cgtggggctggtggacctgctagtgctcaaggttcagtcaagtatgagaattcagacttg
tattcaccagcttccacaccatctacatgcagacccctcaattctgttgaacctgcaact
gtcccttccatccctgaagcgcacagtctttatgtaaacctcatcctttcagaatcagta
atgaacttgtttaaagactgtaattttgatagttgctgtatttgtgtctgcaacatgaat
atcaagggtgccgatgttggagtttacatcccagacccaacgcaggaagcacagtaccgg
tgtacctgtggcttcagtgctgtcatgaaccgaaagtttggaaataattcaggattattt
cttgaagatgaacttgacatcataggacgtaacacagactgtggcaaagaagcagaaaaa
cgttttgaagctctcagggcttcctctgtggaaaatgttaatggaagcctaaaggaatct
gaaaaggtgcctgatgagttgatattactgctacaagatcaatgcactaatttattttca
ccctttggagcagcagaccatgatccctttcccaaagcgggtataagtagcaattgggtg
cgtgttgaggagcgggactgttgtagtgactgttgtctcgcattggaacatgggcgtcag
ttcatggataatatgtcgggaggaaaagttgatgaagcacttgtcagaagctcatgctta
cacccatgggccaagcaaaatgatgcgagtgtgcagtgttcacaggatatacttcggatg
ctcctttctcttcagccagttcttcaagatgctattcagaaaaaaagaacagtgaggcct
tggggggttcaaggtcctctcacatggcaacaatttcataaaatggctggccgaggctct
tatggaactgatgaatctccagaaccactgccgattcccacgtttttgttgggttatgat
tatgattttctggtgctttctccatttgctctcccttactgggagaaacttatgctggaa
ccttatggatctcaaagagatatagcctatgttgtactctgtccagagaatgaagctttg
ttaaatggagccagaagcttttttagagatctcacagcaatatacgagtcctgtcgattg
ggccagcacagacctatttctcgactgttgactgatggcatcatgaaagtgggagctact
gcatcgaagaaactttcggagaagtttgtaacagaatggttttctcaggcagctgatggt
aacaatgaagccttttctaaattgaagctgtatgcacaagtctgcagatacgatctaggt
ccatatcttgcttctcagccgctggacagttctctgctctcccagccaaatttagttgcc
cctccaaatcagtctttggttactgcacctcagatgacaaatactggaaacgctaatgct
ccatctgccaccttagcatctgcggcaagtagcactatgacactgactccaggtgttgcc
atatctacttcagttgccacagctaattcaactttgaccacaacttcatcttcatcatct
tccagtatgagtagtggagtatcatcaaataaactgccttcgtttccaccctttggcagt
atgaacactagtggtacaggatccatgtctgcacaaggaagtacggttcagagtggccag
ctaggaggacagcagtcatcatctctgcaggcagcaggaatatcgggggagtcggcttct
ctgcccactcagccacatcctgacgtgtctgaaagcacaatggatcgggataaagtgggg
attcccacagatggtgattcacatgcaattacctacccacctgcaattgttgtttatata
attgatccttttacatacgagaataaagatgagagcaccagctcttctaatgtatggact
ttggggctccttcgatgcttcttggaaatgctccagactcttcctcctcatatcaaaagt
actgtttctgtacagattgttccttgtcagtacctgttacaacctgtgaaacatgacgac
agacaaatctactcccagcatttaaaatctttggctttttcggcatttacccagtgtcgg
cgaccacttccaacatcaaccaatgtcaaaacactgactgggtttggtccaggcttagct
atggaaactgctcttaaaagtcctgatagaccagagtgtattcgactttatacgccgcct
tttattctggctcctgtgaaggacaaacagacagagctaggagaaacctttggcgaagct
ggacagaaatacaatgttctctttgtgggctactgtttatcacatgatcaaagatggatt
cttgcatcttgcacagatctatatggagaacttctagaaacatgtatcattaacatcgat
gttccaaatagggctcgtcggaaaaagggttctgctagaagatttggtctacagaaactt
tgggagtggtgcttaggacttgttcagatgagctctttaccatggagagttgtaattggt
cgcctgggtaggattggacatggagaattgaaagactggagttgtttgctgagtcgtcga
aacttgcagtctctaagcaaaaggctcaaagacatgtgtcggatgtgtggtatatctgct
gcagactctccgagtatccttagtgcttgtttggttgcaatggaacctcagggttctttt
gttatcatgccagattctgtgtcaactggttctgtttttggaagaagcaccactctaaat
atgcagacgccccagctaaacaccccacaagatacatcctgtactcatatacttgtgttt
cctacttctgcttctgtgcaagtagcctcagctacttacaccactgaaaatttggattta
gctttcaatcccaacaacgatggagcagatggaatgggtatctttgatttattagacaca
ggagatgatcttgatcctgatatcattaatatccttcctgcatctccaactacatctcct
gtacattctccaggctctcattacccccatggaggtgatgctggcaagggtcagggtact
gatcggctactttcaacagaatcgcacgatgaagtaactaatattcttcaacaaccattg
gcccttggatactttgtatcaactgccaaagcgggtccattacctgactggttctggtca
gcatgtcctcaagcacaatatcaatgccccctttttcttaaggcctctttgcacctccac
gtgccttcagtgcaatctgacgaactgcttcacagtaaacactcccacccacttgactca
aatcagacttcagatgtcctcaggtttgttttggaacagtacaatgcactctcgtggcta
acctgtgaccctgcaatccaggacagacgctcatgtctcccaattcattttgtggtgctg
aatcagttatataactttatcatgaatatgctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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