KEGG   Rattus norvegicus (rat): 303477
Entry
303477            CDS       T01003                                 
Symbol
Igf2bp1
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 1
  KO
K17391  insulin-like growth factor 2 mRNA-binding protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    303477 (Igf2bp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    303477 (Igf2bp1)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    303477 (Igf2bp1)
SSDB
Motif
Pfam: KH_1 KH_2 RRM_1 KhpA-B_KH MOEP19 KH_5 RRM_occluded RRM_5 DUF4041 MutS_I DHH
Other DBs
NCBI-GeneID: 303477
NCBI-ProteinID: NP_783184
RGD: 708580
Ensembl: ENSRNOG00000006122
UniProt: Q8CGX0
Position
10:complement(81405021..81447814)
AA seq 577 aa
MNKLYIGNLNESVTPADLEKVFAEHKISYSGQFLVKSGYAFVDCPDEHWAMKAIETFSGK
VELQGKRLEIEHSVPKKQRSRKIQIRNIPPQLRWEVLDSLLAQYGTVENCEQVNTESETA
VVNVTYSNREQTRQAIMKLNGHQLENHALKVSYIPDEQIAQGPENGRRGGFGSRGQPRQG
SPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA
EKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLK
KVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSL
QSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYGSFMQAPEQEMVQVFIPAQAVGAI
IGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFKAQGRIYGKLKEENFF
GPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVKII
GHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQARRK
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgaacaagctttacatcggcaacctcaacgagagcgtgacccccgcagacttggagaaa
gtatttgcggagcacaagatctcctacagcggccagttcttggtcaaatccggctacgcc
ttcgtggactgccccgacgagcactgggcgatgaaggccatcgaaactttctcggggaaa
gtagaattgcaaggaaaacgcctagagattgaacactcggtacccaaaaaacaaaggagt
cggaaaatacagatccggaatattccacctcagctccgatgggaagtgctggatagcctt
ctggcccagtacggcacagtggagaactgtgagcaagtgaacaccgagagtgagacggcg
gtggtcaacgtcacctactctaaccgggagcagaccaggcaagccatcatgaagctaaat
ggccatcaactggagaaccatgccctgaaggtttcctacatacctgatgagcagatagca
caaggtcctgagaatgggcgccgtggaggctttgggtctcgaggccagcccaggcagggg
tcaccggtagcagcaggggcgccagccaagcagcagcaggtggacatccctctccggctc
ctggtgcccacgcagtatgtaggcgccatcattggcaaggagggtgccaccatccgaaac
atcacaaaacagactcagtccaagatagacgtgcacaggaaggagaacgcgggggctgcg
gagaaggccatcagtgtgcactcgacccctgaaggctgctcctcggcctgtaagatgatc
ttggagattatgcacaaggaggcaaaggacaccaagacggcagacgaagttcccctgaag
atcctggctcataataacttcgtggggcgactcattggaaaggaagggcggaacttgaag
aaagtggagcaggatacagagactaagatcaccatctcctcgctccaggatctcacgctc
tataaccctgaaaggaccataactgtgaagggggccattgagaactgctgcagggctgag
caggagatcatgaagaaagttcgagaggcttacgagaatgacgtggctgccatgagcttg
cagtctcacctcatccctggtctcaacctggctgctgtcggtctcttcccagcttcttct
agtgccgttccgcctcctcccagcagcgtcactggggctgctccctatggctccttcatg
caggctccggagcaggagatggtacaggtgttcatccccgcccaggctgtgggcgccatc
atcggcaagaagggccagcacatcaaacagctctcccggttcgccagcgcctccatcaag
attgctccaccagaaacacctgactccaaagttcgaatggttgtcatcactggaccccca
gaggctcagttcaaggctcagggaagaatctatggcaaactaaaagaagagaatttcttt
ggtcccaaggaggaagtaaagctggagacccacatccgggtcccagcttcagcagctggc
cgggtcattggcaaaggtggcaaaacggtgaatgagctgcagaacttgaccgcagccgag
gtggtcgtgccgagagaccagaccccagacgagaacgaccaagtcattgttaagatcatc
ggacatttctatgccagccagatggcccagcggaagatccgagacatcctggctcaagtt
aagcagcagcaccagaagggacagagcaaccaggcccaggcacgaaggaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (29)   

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