KEGG   Rattus norvegicus (rat): 303523
Entry
303523            CDS       T01003                                 
Symbol
Krt39
Name
(RefSeq) keratin, type I cytoskeletal 39
  KO
K07604  type I keratin, acidic
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04915  Estrogen signaling pathway
rno05150  Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09152 Endocrine system
   04915 Estrogen signaling pathway
    303523 (Krt39)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    303523 (Krt39)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    303523 (Krt39)
   04147 Exosome [BR:rno04147]
    303523 (Krt39)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     303523 (Krt39)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   303523 (Krt39)
  Exosomal proteins of other body fluids (saliva and urine)
   303523 (Krt39)
  Exosomal proteins of colorectal cancer cells
   303523 (Krt39)
  Exosomal proteins of melanoma cells
   303523 (Krt39)
SSDB
Motif
Pfam: Filament DMPK_coil T2SSM_b
Other DBs
NCBI-GeneID: 303523
NCBI-ProteinID: NP_001004130
RGD: 1303032
Ensembl: ENSRNOG00000031422
Vega: OTTRNOG00000001556
UniProt: Q6IFW3
Position
10:complement(84970096..84976701)
AA seq 481 aa
MDTKGSTVTISSSTPPQNCSGNTNVRTNSSNKSCYHDVQSTGHALQTPQGQGCRPSPCLY
RCPNYLIRTYSFHPCPDDCSRCSDGINSHEKETMQILNERLASYLEKVRMLEGENADLED
KIQEECSKTLPILCPDYLSYYTTIEQLQQKILCTKAENSRLVSQIDNTKLAADDLRAKYE
AELSLRQLVEADANGLKQILDALTLSKADLEARVQSLTEELLCLKTNHEEEINSLQCQLG
DRINIEVTAAPSVDLNQILQKMRCQYESIVETNRKDVEEWFNTQMEELNQQVVSSSQQQQ
CCQKDIIELRRTISALEVELQAQHRMRDSQECILAETEARYTALLAQIQSLIHNLEAQVA
EIRSALQRQNQEYEVLLDIKSRLECEIATYRSLLESLDGRLPCNPCTTTWEPSCQARAME
CLTPVYTSISLPGIHKPCRASGPPSRILVKICTITKEIKDGKVISSHEHVQPCYITRPAK
V
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggataccaagggctctacagtgactatttcttcttcgaccccaccccaaaactgctct
gggaatacaaatgtcaggactaactcttctaacaagagctgttatcatgatgttcagtca
actggccatgctctacaaactccccagggccagggctgtcgccccagcccctgcctttat
cgctgccctaactacttgataagaacctacagcttccacccctgtccggatgactgcagc
cggtgctctgacggcattaacagtcatgagaaagagaccatgcagattttgaacgaacgc
cttgcaagctatctggaaaaggtgcggatgctggaaggagagaacgcggacctagaggat
aaaatccaggaggagtgcagcaagacactccccatcctgtgtcctgactacctgtcctac
tacaccaccatcgagcagctgcagcagaagatcttgtgtaccaaggctgaaaattccaga
ctggtctcacaaattgacaacaccaaactggctgcagatgacttgagagcaaagtatgaa
gctgaattgtccctacgccagctcgtggaagccgacgccaatggcctgaagcagatcctg
gatgcactgactctgagtaaggctgatctggaggctcgagtccagtctctgacggaggaa
cttctgtgcctcaaaacaaaccatgaggaggaaattaattccttacagtgccaacttggg
gacagaatcaacattgaagtaacagctgccccttctgttgatctaaatcaaatcctacaa
aaaatgagatgccagtatgagtccattgtggagacaaaccgtaaagacgtagaagaatgg
ttcaatacacagatggaggaactgaatcaacaggtagtgagcagctctcaacagcagcaa
tgctgccagaaggacatcatagagctgagacggaccataagtgccctcgaggttgagctg
caggcccagcatcgaatgagagattcccaggaatgcatcctagcagagacagaggcccga
tacacagccctgctggcccaaatccagagtctgatccataacctggaggctcaggtagca
gaaatccgcagtgccctgcaaagacagaaccaggaatatgaagttctgctagacatcaag
tcccggctggagtgtgagatagccacctaccgcagtcttctggagagcttggatggcagg
cttccctgtaacccatgtaccactacatgggagccatcctgccaggccagagctatggag
tgtcttaccccagtttatacatctatatcactccccgggattcacaagccctgccgtgcc
tctggacccccatcccggatactggttaagatatgcaccatcaccaaggagatcaaggat
ggaaaggtcatttcttctcacgagcatgtgcagccttgctacatcaccagacctgccaaa
gtctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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