KEGG   Rattus norvegicus (rat): 303630
Entry
303630            CDS       T01003                                 
Symbol
Wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
  KO
K17908  autophagy-related protein 18
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04136  Autophagy - other
rno04140  Autophagy - animal
rno05010  Alzheimer disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05017  Spinocerebellar ataxia
rno05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    303630 (Wipi1)
   04136 Autophagy - other
    303630 (Wipi1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    303630 (Wipi1)
   05014 Amyotrophic lateral sclerosis
    303630 (Wipi1)
   05016 Huntington disease
    303630 (Wipi1)
   05017 Spinocerebellar ataxia
    303630 (Wipi1)
   05022 Pathways of neurodegeneration - multiple diseases
    303630 (Wipi1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    303630 (Wipi1)
   03029 Mitochondrial biogenesis [BR:rno03029]
    303630 (Wipi1)
Membrane trafficking [BR:rno04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    303630 (Wipi1)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    303630 (Wipi1)
SSDB
Motif
Pfam: PROPPIN WD40 ANAPC4_WD40 DUF5711 BCAS3_WD40 Big_2
Other DBs
NCBI-GeneID: 303630
NCBI-ProteinID: NP_001120769
RGD: 1307754
Ensembl: ENSRNOG00000003827
UniProt: B2RYM2
Position
10:complement(95042451..95079679)
AA seq 446 aa
MEAEAADAPPGRVEAALSCFSFNQDCTSLAIGTKTGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYCYSSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTLLDIPSNPTGLCALSINHSNSYLAYPGSQSTGEIVLYDGNSLKMVC
TIAAHEGTLAAITFNSSGSKLASASEKGTVIRVFSVPEGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEQLTDSRPEEPSTWSGYMGKMLTAATNYLPAQVSDMMNQ
DRAFATGRLNFSGQKNICTLSTIQKLPRLLVASSDGHLYIYNLDPQDGGECVLIKTHSLL
SSGTAEENKENDLRPSLPPSYAATVARPSASTASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKQS
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggaggccgaagctgcagatgcccctccgggccgagtggaggcggcgctcagctgcttc
tctttcaaccaagactgcacatccctagcgattggaaccaagactggttacaagctgttt
tctctgagttctgtggagcaacttgaccaagtccatggaagcaatgaaatccccgacgtg
tatattgtggagcgcctcttctccagcagcctggttgtggtggtcagtcacacaaaacct
cggcagatgaacgtctaccacttcaagaaaggcaccgagatctgtaattactgctactcc
agtaacattttgtctattcggctgaaccgacagagactgctggtctgcctggaagaatcc
atctatatccacaatattaaggacatgaagctattgaagaccctcctggatatcccttca
aacccgacaggtctctgtgccctttcaatcaaccattccaactcttacctggcctacccc
ggaagccagagtacaggcgagattgtactctatgacggaaactccctgaaaatggtgtgc
accattgctgcccacgagggaaccctggccgccatcaccttcaactcctccggctccaaa
ctagcaagtgcgtctgaaaaaggcaccgtcatccgagtgttctctgtgcccgaagggcag
aaactctatgagttccgtcgaggaatgaaaaggtatgtgacaatcagctctctggtgttc
agtatggactcccagttcctgtgtgcctccagcaacacggagaccgtgcacatcttcaag
ttggaacagctgaccgacagccgcccagaagagccttccacctggagcggctacatggga
aagatgctcacggcggctaccaactacctccccgcccaggtgtcggacatgatgaaccag
gacagggccttcgccacaggacgcctgaacttctctgggcagaagaacatttgcaccctg
tccacgatccagaaactgccgcggctgctagtagcctcctccgatggacacctctacatc
tacaatttggaccctcaggatggaggagaatgcgtcttaatcaaaacccacagcttgctg
agctcaggaacagcagaagagaacaaagaaaacgacctcagaccttccttacctccgtcg
tatgctgcaactgtagccagacccagcgcatccacagcctccaccgtgccagggtactct
gaggacggtggggcgctccgtggagaagtgattccagaacacgagtttgcaacgggccca
gtgtgtcttgacgatgagaatgagttcccccctataatcttgtgccgtggaagtcagaag
ggcaaaacgaagcagtcctga

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