KEGG   Rattus norvegicus (rat): 303638
Entry
303638            CDS       T01003                                 
Symbol
Abca8a
Name
(RefSeq) ATP-binding cassette sub-family A member 8-A
  KO
K05650  ATP-binding cassette, subfamily A (ABC1), member 8
Organism
rno  Rattus norvegicus (rat)
Pathway
rno02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    303638 (Abca8a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    303638 (Abca8a)
Transporters [BR:rno02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA5, 6, 8, 9, 10 subgroups
    303638 (Abca8a)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 RsgA_GTPase AAA_29 SMC_N AAA_16 MMR_HSR1 AAA_23 Rad17 nSTAND1
Other DBs
NCBI-GeneID: 303638
NCBI-ProteinID: NP_001268753
RGD: 1307333
Ensembl: ENSRNOG00000004147
Position
10:complement(95501798..95571770)
AA seq 1615 aa
MVKREINVWQQTWALLCKNLLRKKRLKRDTLWELLYTAFILLCLSLFFELHDVYEFSSLS
DVDLGRVDSFNDSTFAIAYTPVTPTTQEIMNRVSLVSYMTGREILAFPNKENMTEFISKH
YDDAVGIIFSTAYSYHLKFMKGTRIPIIKEHQDHTAHCFRYEPAISCDLSAFWRHGFVAL
QAAINSAIIEVTTNHSVMEEMMSLTGKYIKIDSFIAQEGTTTDYFLFLCIIAFSPLTYYI
SAGVTRERKKMKAFMTVMGLRDSAFWLSWGLLYGVIVFIVTLFLTFVVYSVQFVFMTGFM
MIFSLFFFYGLSLISLSFLMSVLLKKSFLTDLVVFFLTVSCGSLGFAALYRYLPVSLEWL
LSLLSPFAFMLGMTQLLRLDYDLESSGHPTGNPNVVIATVFLLFFDGVFYLMLTFYFEKV
LPGEYGRRHPPLFFLKSSFWTGQNPADRTVLDNERDYEFPDDSFEPVSTDFHGKEVIRIR
NLTKEYIQRSKRTEALKDLTLDVYKGQITAILGHSGAGKSTLLNVLSGLCVPTKGWVTIH
DNKLSEMTDLESISKLTGVCPQCNVQFDFLTVRENLRLFAKIKGIQEVDNEVQRVLLALE
MKNIQNTLVQNLSGGQKRKLTFGIAILGDPQIFLLDEPTAGLDPFSRHRVWNLLKERKAD
RVVLFSTQFMDEADILADRKVFISQGKLRCAGSSLFLKKKWGIGYHLSLQLSETCVHERI
TSLVKQHIPDSKLSAESEGKLNYILPLERTNKFPDLYRDLERCPDLGIENYGVSVTTLTE
VFLKLEGKSAIDSDIGETEDVQAGGTRGPGRLDGEQFVSLLNEMSKTKGGMALWWQQLCA
VTRLRFLKLKYRRKSIVILILILGIGLLHILSANVHRLVNQSDYCWELSPHTYFLTPGQR
PQMPLTNLLIINKTGEKIDDFLHSLEQQNIALEVDAFGTRNGTEDSQYNGAIIVAGGEKN
YNFTLACNTKRLNCFPVLVDIVSNALLGLFTPSVHIQTDRSSFPEDTGYTQFYHLLYMFS
WILLMACVPPYISMTSIDDYKNRAQFQLWISGLSPSAYWFGHALFEIPVYSALILSVYIA
FYFSAPPESMITTRDLFIQILYAGGYAMSVIFMMYVISFICRKGRKNSGIWSLCFYIVSF
ISLCLMLFKFFEDTFLFSSIALIPVVTLVGCTLLHFQNHEFPEISLYPERYYTYLFFLAP
FFHFLIFLFILRCLERKFGMKTMRMDPVFRISSRSDRVFNNPEEPEGEDEDVSLERVRTA
NALTSADFQEKPVIIASCLRKEYKGKKKCFVLKGKKKIATRNISLCVRKGEVVGLLGHNG
AGKSTSIKMITGEIKPSAGQVQLKGNSTGDTPEFLGYCPQENALWQHMTVREHLEIFAAI
KGMSKSDAAVAIARLADALKLQDQLKSPVKTLSEGVKRKLCFVLSILGNPSVVLLDEPST
GMDPEGQQQMWQAIQATFANTERGALLTTHYMAEAEAVCDRVAIMVSGKLRCIGSIQHLK
SKFGKEYLLEMKVKTPTQVEPLNMEIMRLFPQAARQERYSSLMVYKLPREDVQPLSQAFF
KLETVKQSFDLEEYSLSQSTLEQVFLELSKEQELDDFEEELDPSVKWKLLPQEEA
NT seq 4848 nt   +upstreamnt  +downstreamnt
atggtgaagagagagataaacgtgtggcaacaaacatgggccttattgtgcaagaatctt
ctcagaaaaaagagactgaaaagagacactctttgggaactcctgtacacagcatttata
ctactttgtttatctttattttttgaattgcatgacgtttatgagttttcgtcactgtct
gatgtggacttgggacgcgttgattcatttaatgactccacctttgcgattgcatacaca
cctgtcaccccaacaactcaggagataatgaaccgtgtctctttggtctcttacatgaca
ggaagagaaatattggcttttccaaacaaagaaaatatgacagagttcatttcaaaacat
tatgatgatgcggtggggatcatattctccaccgcttactcctaccatctgaagtttatg
aaaggaaccaggatcccaatcataaaggagcatcaggaccacacagctcattgttttcga
tatgaacctgccatttcttgtgacctgtcagccttctggagacatgggtttgtggctctt
caagctgccattaactccgccatcatagaagtcacaacaaatcactcagtgatggaagag
atgatgtcacttaccggaaaatacatcaagatagactctttcattgcgcaagaaggaacg
acgaccgactacttcctttttttatgtattattgctttctccccacttacctactatatc
tcagctggtgttacaagagaaaggaagaagatgaaggcctttatgacagtgatgggcctt
cgggactcagcattctggctgtcctggggtttgctctatggcgtcattgtcttcatcgtg
acccttttcctgacattcgttgtatattccgtccaatttgtctttatgactggatttatg
atgatcttcagtctctttttcttctatggcttatctctgatctctttgtctttcttaatg
agtgtcttactaaagaagtctttcctcaccgacttggtggtgttcttcctcactgtttcc
tgcggaagtcttggattcgcagcattatacagataccttcctgtgtccttggagtggctt
ctaagtttgctaagccctttcgcttttatgcttggaatgacccagctcttgcgcttggac
tatgatctggagtcaagcgggcaccccacaggcaaccccaatgtagtcattgccaccgtt
ttcttgttgttctttgatggtgtcttctacctgatgttgacattctactttgagaaggtt
ttaccgggtgaatatggacgtcgacacccacctttgtttttcttgaagtcctcattttgg
acaggacaaaatccagcagatcggactgtccttgacaatgaaagggactatgagtttcct
gatgactcttttgaacctgtgtctacagacttccatgggaaggaagtcatcagaatcaga
aatcttacaaaagaatacatacagaggtctaagcgcacagaagctttgaaagatttgaca
ttggatgtatataaaggccagattactgcaatccttggtcacagtggagctgggaaatca
acgctattaaatgtccttagtggactgtgtgttcccaccaaaggttgggtcactatccat
gataacaaactctcagaaatgactgacttggaaagcatcagcaagctcactggagtttgt
ccgcagtgcaatgtacaatttgacttcctcactgtaagagaaaatcttaggctttttgct
aaaataaaagggattcaagaagtggataatgaggtacaaagggttttgctggcactggag
atgaaaaatattcagaatactcttgttcaaaacctaagtggtggacagaagagaaagctg
acatttggaatcgccattttaggagaccctcagattttcctcctggatgagcccactgct
gggctggatcccttttcaaggcaccgggtgtggaatctcttgaaggagcgcaaagcagac
cgcgtggtcctcttcagcacacagttcatggatgaagctgacatcctggctgataggaaa
gtgttcatctcccaggggaagctgaggtgtgcaggatcttccttgtttctgaagaaaaaa
tgggggattggttatcacttaagcttgcagctgagtgaaacgtgtgtgcacgaaagaata
acatcgctcgtcaaacagcacatccccgattccaagttgtcggcagaaagcgaagggaaa
ctgaattacatattacccctggaaaggacaaacaaatttccagatctttatagggatctc
gagagatgccccgacctgggaattgagaactatggcgtttctgtaacaactctgactgag
gtctttctgaaactggaaggaaaatcagcaattgattcagatattggtgagacagaagat
gtacaagctggagggacaagaggcccagggagacttgatggggagcaatttgtctcttta
cttaatgagatgagtaagacaaaagggggcatggctctctggtggcagcaactctgtgca
gtgaccaggcttcgcttcttgaagttaaagtatagaaggaaatccatcgttattctgatt
ctgattttggggattggacttctgcatattctgtcagcaaatgttcacaggttagtcaat
cagagtgattactgttgggagctctctcctcatacgtacttcctcacacctggccaacga
ccacagatgcccctcacaaacttactgatcatcaacaaaacaggagaaaagatcgatgac
ttcctacattcgctggagcaacagaacatagctttggaagttgatgcctttgggactaga
aacggcacagaggatagccagtataatggcgctatcatcgtagcgggcggtgagaagaat
tacaactttacattggcatgcaataccaagaggctgaattgttttcccgttctggtggac
atagtgagtaatgcgctactcggactgttcacaccatcagtgcacattcaaactgatcgc
agctcatttcctgaggatacaggctacacacagttttaccacttgctttacatgttctca
tggatccttttgatggcctgcgtccctccttacatttccatgaccagcattgacgactat
aagaacagagctcagttccagctgtggatttcagggctctccccttctgcatactggttt
ggtcatgctctttttgagatcccagtctactctgcactcattttgtctgtgtacattgct
ttctatttctcggcccctccagagagtatgatcacaactagagatctgtttattcagatc
ctctatgctggtggctatgctatgtcagttattttcatgatgtatgtgatttcattcatt
tgtcgcaaggggagaaaaaatagtggcatttggtcactttgcttctatattgtctctttc
atctctctatgtcttatgttatttaaattctttgaagatacctttttgttttcttctatt
gccctgattccagttgttacactggtagggtgtacattattacattttcagaatcatgag
tttcctgaaataagtttgtacccagaaaggtactatacctatctgtttttcctagctcct
ttctttcattttctcatcttcctatttattcttcgatgtctggaaaggaagtttggaatg
aaaacaatgagaatggatcctgtctttagaatttcttcaagaagtgatcgtgtatttaac
aatccagaggaaccagaaggggaagacgaagatgtgagtctagaaagagtgaggacggca
aacgctttgacgtcagcggacttccaggagaagccagtcatcattgccagctgccttcgt
aaagagtacaagggaaagaagaaatgcttcgttcttaagggcaagaagaagatagccaca
aggaacatctctctttgcgttcgcaaaggcgaggtggtcggattactgggacacaatgga
gctgggaaaagtacatccattaagatgataactggggaaatcaagccaagtgctggacag
gtgcagctgaaagggaacagcacaggggacaccccggaattcctagggtactgtcctcag
gaaaatgctctgtggcaacacatgactgtgagggaacacctggagatatttgccgccata
aaggggatgagcaaaagcgatgctgccgtggccattgcaaggttggcagatgcactcaag
ctgcaggaccagctgaagtctccggtgaagacgctgtcagagggagtgaagagaaagctg
tgctttgtgctgagcatcctgggaaacccttctgtggtgcttctggatgagccatccacc
gggatggaccccgaggggcagcagcaaatgtggcaggcgatccaggccaccttcgcaaac
acagagaggggcgccctcctgaccacccattacatggcagaggctgaggctgtgtgtgac
cgcgtggccatcatggtgtctgggaagctgagatgtattggatccatccaacatctaaag
agcaaatttggcaaagaatatctcctggagatgaaggtgaagacccccacacaggtggag
cccctcaacatggagatcatgaggctcttcccccaggctgctcggcaggaaaggtactct
tctctgatggtctataaactgcccagggaagatgtgcaacctttatcccaggcctttttc
aaattagagacagttaaacagagctttgacctggaggagtacagcctctcacagtccact
ctggagcaggtcttcctggaactctccaaggaacaggagctggatgattttgaagaggaa
ctcgatccctcagtgaagtggaagctcctcccacaggaagaggcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (32)   

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