KEGG   Rattus norvegicus (rat): 303742
Entry
303742            CDS       T01003                                 
Symbol
Faap100
Name
(RefSeq) Fanconi anemia core complex-associated protein 100 isoform X1
  KO
K10993  fanconi anemia core complex 100 kDa subunit
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    303742 (Faap100)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    303742 (Faap100)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     303742 (Faap100)
SSDB
Motif
Pfam: FANCAA
Other DBs
NCBI-GeneID: 303742
NCBI-ProteinID: XP_038943747
RGD: 1306926
Ensembl: ENSRNOG00000036699
Position
10:complement(106140820..106152500)
AA seq 913 aa
MWAVPSQVLSQNDARASAAYNLAPEQPLLNRMAGASSRVHYLSDFCCPLGGRAAGKPHVL
RHDAEVFLSTGREFVYVYDQEGGLLTAVYQFPDQVWHLQLLATRRALYVLCARTGIYCLS
LDSLDRSGSQACEDKEDETHPYPVIHVDPDACVLPDAALCAFTVLDDVLVTLAQGPTQWK
MQLFECPHAGEEPRPGGQVGEVQLSTCTPPGGVPGEPTAPCFLPVLCCVFPPDSRAPHGH
PQGCGCFMLEEALFGLLFGVDASLLQSPVVLCGLPDGQLCCVALKALVTSELAPGDPKVL
VKILHHLEEPVIFIGALRAEPQEEEEEEAVRELLPVENVHSDCLVALGHQGRTLAIRASW
SESGNLVPELREYYLPGPVLCAACGRDGHMYHSTPSDLCVVDLTRRDSTWNPEKPDGAIG
SLPSTLCPASLNICSALALCVTARAPTGGTELLVLSSKGRLITCSLDLNPEAPVPTKMAV
ANAGQKIKELLLDIGDVSERVSFLKKAVDQRNKAITSLNEAMNVSCALLSSQEGDRPISC
TITTSWSRLELRDMLMATCTLDNSSSFSLDQGWTLCIQVLTSSSALDLDGTGSAFTYTIP
VDRLGPGSRREVTLPLGPSESGVLDLPVTMSCWLFYSLREVIGEALAPSDPLEVPYLEKL
PLNLPKQEGVCLPLCKRTVDMLQCLRFPGVASHPAQAPSVPGPACDPVETFLKTCQGPGS
EPTGAASLRAKYLPPSTASIRVSAGLLRAALEDGHSGFHLCSATLCWLLAENAAVDVLRA
QALSSIQGIAPDGTDVNLIVHEVAVTDLSPAGPIQAVEIQVESSSLANMCRAHHAIIRRI
KTMVTEQAAQGSSPPDLRMQYLQQIHANHQELLREVQTLRDQLCTEDEVSSCSTAQKLLQ
IYKQLRNPSLVLL
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgtgggcggtaccctcccaagtgctgtcacaaaacgatgcgagggcaagtgctgcatac
aaccttgcaccagagcaacctctgctcaacaggatggcgggcgcttcctcgcgcgtgcac
tatctgtcggacttctgctgcccgctcggaggccgagcggcggggaagccccatgtgctg
cgacatgatgcggaggtctttctgtccaccgggcgcgagttcgtctatgtgtatgaccag
gagggcgggctgctgacggcggtgtaccagtttcccgaccaggtgtggcacctgcagctc
ctggccacccgcagggcactctacgtcctgtgtgcccggactggcatctactgcctgtcg
ttggactcactggacaggtctgggagccaggcctgtgaggacaaagaggatgagactcac
ccttaccctgtgatccatgtggacccagatgcctgtgttctccctgacgctgccctctgt
gccttcactgtgctggacgatgttctggtcaccctggcacagggccccacccagtggaag
atgcaactctttgagtgtccccatgcaggggaggagcctcggcctggaggccaggtcggt
gaggtgcagctatccacctgcacccctccaggtggggtgccgggggagcctacagccccc
tgcttcctgccagtactgtgctgtgtgttcccaccagactccagggcacctcatggtcac
ccccagggctgtgggtgcttcatgctggaggaggctctctttggtctactctttggagtt
gatgccagtctcctgcagtcccctgtggtcctctgcggtctccctgatggccagctttgt
tgtgtggccctgaaggctctggttacttctgagttagcccctggtgacccaaaggtcctg
gtcaagatcctccaccacctagaggagcctgtgatcttcattggggctttgagggcagag
ccacaggaggaggaggaggaggaagcagtaagagagctgctgcctgtcgagaatgtgcac
tctgactgcctagtagcccttggtcaccagggccggacactggccatcagggccagctgg
agtgagtcagggaatctggttccagagcttcgtgagtattacctcccggggcctgtgctc
tgtgccgcctgtggcagggatggccacatgtaccacagcaccccctcagacctctgtgtg
gtagacctgactcggagagacagtacttggaaccctgagaagccagatggggccatagga
agcctgccctccacgctgtgcccagccagcttgaacatctgcagcgcccttgctctgtgt
gtgacagcaagggcacctacaggtggcaccgagctcctggtcctgtcttctaaaggacgc
ctgatcacctgcagtctggacttgaaccctgaggcacctgtgcctaccaagatggctgtg
gcaaatgcaggccagaaaattaaggagctgctcctggacattggcgatgtctctgagagg
gtgtcctttctgaagaaagctgttgaccagcgcaacaaggccataacaagtctcaatgag
gccatgaatgtgagctgtgccctgctgtccagccaggagggcgaccggcccatctcatgt
accatcaccacctcctggagccgcctggagctgcgagacatgctgatggccacctgcaca
ctggacaatagcagcagcttcagcctggaccagggctggaccttgtgcattcaggtgctg
actagttcctctgccttagacctggatgggactggttcagctttcacctacaccattcca
gtggacagactgggcccaggcagccggcgggaagtgacgttgcccctgggccctagtgag
agtggtgtgctcgacctgcctgtgaccatgtcctgctggctcttctatagcctcagggag
gtgataggtgaggcccttgccccctcagaccctctagaggtcccctacctggagaagctc
cctctcaaccttcctaagcaagagggtgtctgcctgcccctgtgcaagcgcacagtggac
atgcttcagtgcctgcgctttcctggcgtggcctcacaccctgcccaggcccccagtgtg
cctggccctgcctgcgatcctgtggaaactttcctgaagacctgccaaggccctggcagc
gagcccactggtgccgcctcgctacgggccaagtacctgcctccatccacagcctccatc
agggtgtctgcaggcctcctcagagctgccctagaagacggtcactcaggcttccacctg
tgcagtgctaccctgtgctggctccttgccgagaatgctgctgtggatgtcctgagggcc
caggcactgtcttctatccagggaatagccccagatgggacggatgtcaacctcatcgtg
catgaggtagctgtgactgatttgagccctgcagggcccatccaggctgtagagatccaa
gtagagagctcctctctggccaacatgtgcagggcgcaccatgccatcatcagacgaata
aagacgatggtcacagagcaagcagcccaaggctccagcccacctgacctccgtatgcag
tatttacagcagatccatgccaaccaccaggaactgctccgtgaagtgcaaaccctgcgt
gatcagctgtgcactgaagacgaagtgagttcctgctccacagcccagaaactcctgcag
atttacaagcagctgcgtaaccctagccttgtcctgttgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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