KEGG   Rattus norvegicus (rat): 303918
Entry
303918            CDS       T01003                                 
Symbol
Gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03022  Basal transcription factors
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    303918 (Gtf2e1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    303918 (Gtf2e1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    303918 (Gtf2e1)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     303918 (Gtf2e1)
 Prokaryotic type
  Archaeal type
    TFE
     303918 (Gtf2e1)
SSDB
Motif
Pfam: TFIIE_alpha TFIIE-A_C TF_Zn_Ribbon OrfB_Zn_ribbon zf-H2C2_2
Other DBs
NCBI-GeneID: 303918
NCBI-ProteinID: NP_001094026
RGD: 1306851
Ensembl: ENSRNOG00000026008
UniProt: A6IR94 G3V992 Q4FZQ9
Position
11:76687382..76720253
AA seq 438 aa
MADPDVLTEVPAALKRLAKYVIRGFYGIEHVLALDILIRNPCVKEEDMLELLKFDRKQLR
SVLNNLKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERN
STNRASFKCPVCCSTFTDLEANQLFEPMTGTFRCTFCQAEVEEDESAMPKKDARTLLARF
NEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKDRAASAAGAAGLAGGHHREAWT
NKGPSYEDLYTQNVVISMDDQDDVHRTSLEGKAAKERPIWLRESTVQGAYGSEEMKEGGI
DMDTFQDREEARAGPDDNEEVMRALLIHEKKTSSATAGSVGAAAPVTAANGSDSESETSE
SDDDSPPRPAAAAPHHRDEDEEDDEFEEVADDPVVMVAGCPFSYSEVSQRPELVAQMTPE
EKEAYIAMGQRMFEDLFE
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggcagacccagatgttctcactgaagttccagcagcattgaagcggttagccaagtat
gtcatccggggcttttatggcattgagcatgtgttggccttggacatcttgatccggaac
ccttgtgtaaaagaagaggacatgctggagctgctcaagtttgaccggaagcagcttcga
tccgttttgaataatttaaagggagacaagttcatcaaatgcagaatgagggtagagact
gctgcagatgggaagaccacccgccataactactacttcatcaattaccgcactcttgtt
aatgtagtgaagtataagctggaccacatgagaaggaggattgaaacggatgagagaaac
tccaccaatcgggcttccttcaaatgtcctgtctgctgcagcactttcactgacctggaa
gctaatcagctgtttgaacccatgacaggaactttccgctgcaccttttgccaggcagag
gtagaagaagatgaatcagcaatgcccaaaaaagatgcgcgcacacttttggcaaggttt
aatgaacaaattgagcccatttatgcattgcttcgagagacagaggatgtaaacttggcc
tacgaaatacttgaaccagaacccacggaaatcccagccctgaagcagagcaaggaccga
gcagcaagtgctgctggagcggctggcctggcaggtgggcaccaccgggaagcatggacc
aacaaaggcccctcttatgaagacttgtatactcagaatgttgtcatcagcatggacgac
caagacgatgtgcatcgcacctcgctggaagggaaagccgccaaagagagacccatttgg
ttgagagagagcactgtccagggggcgtacggttctgaagagatgaaggaaggtggcatc
gacatggacacatttcaggatcgagaggaagcccgtgcggggcctgatgacaacgaggag
gtcatgcgagctctactcattcatgagaagaagacgtcttcggcgacagctggctcagtg
ggagcagccgctccggtgactgctgccaacggcagtgactctgagagtgagaccagtgag
tcggatgacgactctccaccccggccagcagctgcagctcctcatcaccgcgatgaagat
gaggaagatgacgagtttgaggaagtagcagatgaccccgttgttatggtggctggctgc
ccattctcctacagtgaggttagccagcggccagagttggtagctcagatgacaccagaa
gaaaaggaagcctacatagccatgggccagcggatgtttgaggatctcttcgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (3)   
   RefSeq(pep) (5)   
DNA sequence (13)   
   RefSeq(nuc) (5)   
   GenBank (4)   
   EMBL (4)   
Protein domain (5)   
   Pfam (5)   
All databases (37)   

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