KEGG   Rattus norvegicus (rat): 303968
Entry
303968            CDS       T01003                                 
Symbol
Ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog
  KO
K04638  intraflagellar transport protein 57
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05016  Huntington disease
rno05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    303968 (Ift57)
   05022 Pathways of neurodegeneration - multiple diseases
    303968 (Ift57)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    303968 (Ift57)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B2
   303968 (Ift57)
SSDB
Motif
Pfam: IFT57 Mod_r MCPsignal DUF745
Other DBs
NCBI-GeneID: 303968
NCBI-ProteinID: NP_001100563
RGD: 1305947
Ensembl: ENSRNOG00000001958
UniProt: D4A1V1 A6IQU7
Position
11:complement(64528349..64593545)
AA seq 429 aa
MAAAAAVIPPSGLDDGVSRARGEGAGEAVVERGPGAAYHMFVVMEDLVEKLKLLRYEEEL
LRKSNLKPPSRHYFALPTNPGEQFYMFCTLAAWLINKTGRAFEQPQEYDDPNATISNILS
ELRSFGRTADFPPSKLKSGYGEHVCYVLDCLAEEALKYIGFTWKRPSYPVEELEEETVPE
DDAELTLSKVDEEFVEEETDNEENFIDLNVLKAQTYRLDTNESAKQEDILESTTDAAEWS
LEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGFLDKLHNEISRTLEKI
GSREKYINNQLEHLVQEYRGAQAQLSEARERYQQGNGGVTERTRLLSEVTEELEKVKQEM
EEKGSSMTDGTPLVKIKQSLTKLKQETVQMDIRIGVVEHTLLQSKLKEKCNMTRDMHAAV
TPESAIGFY
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggctgccgcggccgcggtgatcccgccgtcgggcttggacgatggggtgtctcgggct
cgcggggaaggcgctggggaggcggtggtggagcgcgggccgggagcggcctaccacatg
ttcgtggtgatggaagacttagtggagaagctgaagctgctccgctacgaggaggagcta
ctccgaaagagcaatctgaagcccccgtccagacactactttgctctgcctaccaatccc
ggtgagcagttctacatgttttgcactcttgctgcctggctgatcaacaagactggccgt
gcctttgagcagcctcaggaatatgacgatcccaatgcaactatatctaacatcctgtct
gagctccgctcttttgggagaactgcagattttcctccttcaaaattaaagtctggttat
ggagaacatgtatgctatgttcttgattgtttagctgaagaagcattaaaatatattggt
ttcacttggaaaaggccatcatacccagtggaagagttagaagaagaaactgttccggaa
gatgatgcggagttaacattaagtaaagtggatgaagagtttgtggaagaggagacagat
aatgaagaaaactttattgatctcaacgttttaaaggcccagacctatcgcttggacaca
aacgagtctgccaaacaagaagatattttggaatctacgacagatgctgcggaatggagt
ctagaagtggaacgtgtactaccccagctgaaagtcacgatcaggactgacaacaaggat
tggagaatccacgttgaccaaatgcaccagcacaaaagtggaattgaatctgctctaaag
gagaccaaggggttcttggacaagctccataatgaaattagcaggactctggaaaagatc
ggcagccgggaaaagtacattaacaatcaacttgagcacttggttcaagaatatcgtggg
gcccaggcccagctaagtgaggcaagggaacgctaccagcagggcaatggcggagtaact
gaacggaccagactcctgtctgaggtgacagaagaattagaaaaggtaaaacaagaaatg
gaagagaagggcagcagcatgacggatggcactcctttggtgaagattaagcagagctta
accaagctgaagcaagaaactgttcagatggacattagaatcggggttgtggagcacacg
ctgcttcagtcaaagctcaaggagaagtgtaacatgaccagagacatgcatgcggctgtc
accccagagtcagcaatcggcttctattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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