KEGG   Rattus norvegicus (rat): 304218
Entry
304218            CDS       T01003                                 
Symbol
Pds5b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform 2
  KO
K11267  sister chromatid cohesion protein PDS5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    304218 (Pds5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    304218 (Pds5b)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    304218 (Pds5b)
SSDB
Motif
Pfam: PDS5 PI-TkoII_IV DUF4420
Other DBs
NCBI-GeneID: 304218
NCBI-ProteinID: NP_001095275
RGD: 1310838
Ensembl: ENSRNOG00000001098
UniProt: D3ZU56
Position
12:5038114..5181208
AA seq 1413 aa
MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYA
LQSAAGKDAAKQICWVKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRKQLEALVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNITVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKEC
LWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDTKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTANVLGAVNKPLSS
AGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRQSELEKPRSRKKASVTDPEEKLGMDDL
SKLVQEQKPKGSQRGRKRGHAASESEEQQWPEEKRHKEELLGNEDEQNSPPKKGKRGRPP
KPLGGTSKEEPVVKTSKKGNKKKPAPPVVDEDEEEERQMGNTEQKSKSKQQRTSKRAQQR
AESPETSAVESTQSTPQKGRGRPSKTPSPSQPKKNIRVGRSKQVATKENDSSEEMDVLQA
SSPVSDDTTQEGAEEEDISAGNVRRRSSKRERR
NT seq 4242 nt   +upstreamnt  +downstreamnt
atggctcattcaaagacaagaaccaacgatggcaaaattacttaccctcctggtgtcaag
gagatctcagataaaatctctaaagaggagatggtgaggcggctaaagatggttgtaaaa
acattcatggacatggaccaggactctgaagaggaaaaggaactgtatctaaacctagct
ttacaccttgcttctgacttcttcctcaagcatcctgataaagatgtccgtttactggtg
gcttgctgccttgctgatattttcaggatttacgctcctgaggctccttacacatctccc
gataaactaaaggatatatttatgtttataacaaggcaattgaagggactggaggacaca
aagagccctcaattcaataggtatttttatttacttgagaacattgcatgggttaaatca
tataacatatgctttgagttagaagatagcaatgaaatctttactcaactatacagaaca
ttattctcagttataaacaatggccacaatcagaaagttcacatgcacatggtggacctt
atgagctctatcatctgtgaaggtgacacagtatcgcaggagctcctagatacagtctta
gtgaatctggtgcctgctcataagaacttaaacaagcaagcgtatgatttggcaaaggcg
ttgctgaagaggaccgctcaagctattgaaccctatattaccaatttttttaatcaggtt
ctgatgcttgggaaaacatctatcagtgatttgtctgagcatgtctttgatttgatcttg
gaactctacaacattgacagccatttgctgctttctgttctgccccagcttgagtttaaa
ttaaagagcaatgacaatgaagaacgcctccaggttgttaaactcctggcaaaaatgttt
ggggcaaaggactcagaattggcctctcaaaacaaaccactctggcagtgctacttgggc
aggttcaatgacatccatgtgccaatacgcctggaatgtgtgaagtttgccagccactgc
ctcatgaaccatcccgatttagcaaaggatttaacagagtatcttaaagtgaggtcacac
gaccctgaagaagctattagacatgatgtcattgtgtctatagtaacagctgctaaaaag
gacattcttcttgtcaacgatcacctactcaactttgtgagagagcgaacgttggacaaa
cggtggagagtacgcaaagaagccatgatgggacttgcccagatttacaagaaatacgct
ttacagtcagcggctggcaaggacgctgccaagcagatatgctgggtcaaggacaagctg
ctgcatatatactatcagaacagcattgatgaccggttgcttgttgagcggatctttgct
cagtacatggttcctcacaacttggaaactacggagcggatgaagtgcttgtactacttg
tatgctaccctggacctgaatgccgtgaaggcattgaatgaaatgtggaaatgtcaaaat
ctactccgacatcaagtaaaggatttgcttgatttaattaaacaaccaaaaacagatgcc
agtgtcaaggccatattttctaaagtgatggttattacaagaaatttgccagatcctggt
aaggcccaggacttcatgaagaaattcacacaagtgttggaagatgatgagaaaatacgg
aaacagctggaggcccttgttagccctacatgctcctgcaagcaggctgaaggctgtgtg
cgtgaaataactaagaagctgggaaaccctaaacagcctacgaaccccttcttggagatg
atcaagttcctcctggagaggatagcccctgtgcacattgacactgagtctatcagcgct
cttatcaagcaggtgaataagtcgatagatgggacagcagatgatgaggacgagggcgtc
cccacagatcaggctatccgcgcgggcctcgagctgctgaaggtgctgtcttttacacac
cctatctcattccactctgccgagacgtttgaatccctgctggcttgtctgaagatggat
gatgaaaaggtggcggaagctgccctacaaattttcaaaaacacaggaagcaaaatcgaa
gaggatttccctcacatcagatcagccttgcttcctgtcctacatcacaaatccaaaaaa
ggaccacctcgtcaggccaagtacgccatccactgcattcatgccatattttccagtaaa
gagacccagtttgcacagatatttgagcctctgcataaaagcctggaccccagcaacctg
gagcacctgatcaccccgctggtcaccattggtcacatcgctctgctcgcgcctgatcag
ttcgctgccccactcaagtccttggtagcaactttcattgtgaaggaccttctcatgaac
gatcggcttccaggaaaaaagacaactaagctttgggttcctgatgaagaagtctcccct
gagacaatggtcaaaattcaggctattaagatgatggttcgctggctgctcggaatgaaa
aataatcacagtaaatcaggaacttccaccctcagattactaactacgatactgcatagt
gatggggacttgacagaacaagggaaaattagtaaaccggacatgtcccgcctgagactt
gctgctgggagtgctattgtgaagctggcgcaagagccctgttaccacgagatcatcaca
ctggagcagtaccagctgtgcgcactggccatcaatgacgagtgctatcaagtcaggcag
gtgtttgctcagaaacttcacaaaggcctctcccgcttacggctcccactagagtacatg
gccatctgtgctctctgtgccaaagacccggtgaaagagcggagagcgcatgccaggcag
tgcctggtgaagaacatcactgtgaggagggagtacctgaagcagcacgcggctgttagt
gaaaaattattgtctcttctcccagagtatgttgttccgtatacaattcaccttttggca
catgaccccgactatgtcaaagtgcaggatattgaacaacttaaagatgtgaaagaatgc
ctttggtttgttctggagatattgatggctaaaaatgaaaacaacagccatgcatttatc
agaaagatggtagaaaatattaaacagacaaaagatgctcaaggaccagatgatacaaaa
atgaatgaaaaattgtacaccgtgtgtgatgtagccatgaacatcatcatgtcaaagagc
accacatacagtctggagtccccaaaagacccagtgttgcctgctcggtttttcacccag
cctgacaagaattttagtaacaccaaaaattacctgcctccagaaatgaaatcatttttc
actcctggaaaacctaaaacagccaatgtcctcggagcagttaataagccgctttcatcg
gcaggcaaacagtctcagaccaaatcctcacggatggaaaccgtgagcaacgcgagcagc
agctcaaacccaagctctcctggaagaataaaggggaggcaatctgagttggagaagcct
agaagtcggaaaaaagcatctgtcacagacccagaagagaaattaggtatggatgacctt
agtaagctggtccaggaacagaaacctaaaggcagtcagcggggccggaaaagaggccat
gcggcttcagaatcagaggagcagcagtggcctgaggagaagaggcacaaagaggagctc
ctgggaaatgaggacgagcagaacagccccccgaagaagggcaagagaggcaggccacca
aagcctcttggggggacatccaaggaagagccagtggtgaaaacatccaagaagggaaac
aagaagaagcctgcacctcctgtagtagacgaagatgaagaagaagaaagacaaatggga
aacacagaacagaagtcaaagagcaaacagcagcgcacgtccaagagggctcagcagaga
gcagaatctcctgagactagtgcagttgaatccacacagtccacaccacagaaaggacgg
ggaagaccatcaaaaacgccatcaccatcacaacccaaaaaaaatatccgtgtaggacgc
tccaaacaggtagctactaaagaaaacgattcaagtgaagaaatggatgtgcttcaggcc
agctctcctgtcagcgacgacactacgcaggaaggagcagaagaggaggatatttctgca
ggaaatgtacggcggcgaagctccaaacgagagagacgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (1)   
   RefSeq(pep) (11)   
DNA sequence (24)   
   RefSeq(nuc) (12)   
   GenBank (6)   
   EMBL (6)   
Protein domain (3)   
   Pfam (3)   
All databases (49)   

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