KEGG   Rattus norvegicus (rat): 304300
Entry
304300            CDS       T01003                                 
Symbol
Papolb
Name
(RefSeq) poly(A) polymerase beta
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    304300 (Papolb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    304300 (Papolb)
Enzymes [BR:rno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     304300 (Papolb)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     304300 (Papolb)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 Polbeta
Other DBs
NCBI-GeneID: 304300
NCBI-ProteinID: NP_001012020
RGD: 1310946
UniProt: Q6AYH1
Position
12:17157757..17160103
AA seq 642 aa
MMPFAVTTQGAQQPAPAPKQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQ
RRILILQKLNNLVKEWIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCV
APRHVDRNDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP
EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSN
ILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWS
KLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ
SFPAPKENVDKEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM
DMKIAAMHLRRKELHQLLPNHVLQKKETHLTEGVRLTAVNDSSLLLSIDSENSMTAPSPT
GTIKTGPLTANPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSGIALSESIAQIPSQ
PTISPPPKPTMTRVVSSTHLVNHPSRPSGNTATNIPNPILGV
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgatgccatttgcggtgaccacccaaggagcacaacaaccggctcccgccccgaagcag
tacggcatatcgtcccccatcagcctggccgcccccaaggacacagaccgcgaactcacc
cagaagctgatcgagaccctccagcccttcggggtgtttgaagaggaagaggaactgcag
cgcaggattttaattttgcagaaattaaataatctggtgaaggaatggatccgagaaatc
agtgaaagcaggaatcttccacaagctgtaattgagaatgttggggggaaaatttttacg
ttcggctcttaccgactaggagtacacacgaaaggtgcagatatcgatgcgttgtgcgtt
gcaccaagacacgtggatcgaaatgactttttcacctccttctatgacaaattgaaacta
caggaggaagtaaaagatttaagagcggttgaggaggcctttgtgccggttatcaaactg
tgttttgatggaatagagattgatattttgtttgcaagattagcattgcagactattccg
gaagatttggacctacgagatgatagtctgcttaaaaatttagatattaggtgcataaga
agccttaatggttgccgggtaactgatgaaattttacacctagtaccaaacattgacagc
ttcaggttaacactgagagccatcaaattatgggccaaatgccacaacatctattccaat
atattgggtttccttggaggtgtttcctgggctatgctggtagcaagaacttgccagctt
tatccaaatgcaatagcatccactcttgtacgaaaatttttcttggtattttctgagtgg
gaatggccaaatccagtcttgttaaaagaaccagaagaacgaaatcttaacttgcctgta
tgggacccaagagtgaatcctagtgacaggtaccatcttatgcctataattacaccagca
tacccacagcagaactccacatacaatgtgtctgtgtcaaccaggatggtcatgattgag
gagtttaagcaagggcttgctatcacacatgaaattctgctgaataaggcagaatggtcc
aaactttttgaagctccaagcttttttcagaaatataagcattatattgtactactggca
agtgcaccaacagagaaacaacatttagagtgggtgggcttggtggaatcaaagatccga
atcctggttgggagcctggaaaagaatgaattcattactctggcacatgtgaatccccag
tcatttccagcacctaaagaaaatgttgacaaagaagaatttcgtactatgtgggtgatt
gggttagtgttgaaaaagccagaaaattctgaaattctcagtattgatctcacttatgat
attcagtctttcacagatacagtgtacagacaagcaataaatagtaagatgtttgagatg
gatatgaagattgctgcaatgcatctaagaagaaaggaacttcatcagctacttccaaat
catgttcttcagaaaaaggaaacacatttaacagaaggtgtaagattgacagctgtgaat
gatagcagccttctcttgtctatagacagtgaaaacagcatgactgcaccttcacctact
ggcactataaagacaggcccactgactgcaaaccctcagggcagaaacagtcctgctctg
gctgttatggcagcatccgtgaccaacatacagtttcctgacgtttccttgcagcacgtg
aaccccatagaaagttcagggattgcactgagtgaaagcattgctcagattccctcacag
ccgaccatctcaccaccacctaagcctaccatgaccagagttgtttcttcgacacatctg
gtaaaccatccatctagaccttcaggaaatacagcaacaaacatacccaatcctatacta
ggagtctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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