KEGG   Rattus norvegicus (rat): 304378
Entry
304378            CDS       T01003                                 
Symbol
Gigyf1
Name
(RefSeq) GRB10-interacting GYF protein 1
  KO
K18730  PERQ amino acid-rich with GYF domain-containing protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    304378 (Gigyf1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     304378 (Gigyf1)
   Surveillance factors
    Other surveillance factors
     304378 (Gigyf1)
SSDB
Motif
Pfam: GYF GYF_2
Other DBs
NCBI-GeneID: 304378
NCBI-ProteinID: NP_001100603
RGD: 1309933
Ensembl: ENSRNOG00000001410
UniProt: A6J025 D3ZQJ3
Position
12:complement(24800996..24819719)
AA seq 1042 aa
MAAETLNFGPEWLRALSSGGSVASPPPSPAMPKYKLADYRYGREEMLALYVKENKVPEEL
QDKEFAAVLQEEPLQPLALEPLTEDEQRNFSLSVNSVAVLRLMGKGAGPPLAATSRGRGS
TRSRGRGRGDSCFYQRSIEEGDGAFGRNPREIQRSQSWDDRGERRFEKSARRDGVRSGFE
EGGAGPRKEHARSDSENWRSLREEQEDDSSWRLGAGPRRDGDRWRSTSPDGGPRSAGWRE
HGERRRKFDFDLRGERGGCGEEDGRVGGGNSHLRRCRGLDGFEDDKDGLPEWCLDDEDEE
MGTFDASGAFLPLKKGPKEPIPEEQELDFQGLEEEEEEPSDGVDEEGPEAGGKEVTPLPP
SEKSSSPSSLPALGPLWTANEDGEAVEKELPPAEGDEMRGLPLSPRISSPPAGPPADLED
EEGLKHLQQEAEKLVASLQDSSLEEEQFTAAMQTQGLRHSTAATALPLSHGAARKWFYKD
PQGEIQGPFTTQEMAEWFQAGYFSMSLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPP
LLGNMDQERLKKQQELAAAALYQQLQHQHFLQLVGSRQLPQCATLREKAAMGDLTPPQQQ
LTTFLQQLQALKTPRGGDQNLLPTMSRSLSVPDSGPLWDLHTSASSQSGGEASLWDIPIN
SSTQGPILEQLQLQHKFQERREVELRVKREEEERKRREEKRRQQQQQEEQKRRQEEEELF
RRKQVRQQELLLKLLQQQQATNVPVPPAPSSPPPLWAGLAKQGLSMKTLLELQMESERQL
HKQPAPREPLRAQAPNHRVQLGGLGTAPLNQWVSEAGPLWGGPDKSGGSSSGNLGLWEDT
LKSGGSLARSLGLKNSRSSPSLSDSYSHLSGRPVRKKTEEEEKLLKLLQGIPRPQDGFTQ
WCEQMLHTLSTTSSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFAKQFLERRAK
QKASQQRQQQQQQQQQQQQQQQEAWLSSSSLQTAFQANHSTKLGPGEGSKAKRRALMLHS
DPSILGYSLHGPSGEIESVDDY
NT seq 3129 nt   +upstreamnt  +downstreamnt
atggcagcggagacactcaactttgggcctgagtggctgagagccctttccagcggtggc
agcgtggcctctccacccccatcccctgccatgcccaagtacaagctggcagattaccgc
tatgggcgagaggagatgctggccctctatgtcaaggagaacaaggttcccgaggaacta
caggacaaggagtttgctgcagtgttacaggaggagccgctgcagcccctggctctggag
cctctcactgaggatgagcagagaaacttctccctgtcggtgaacagtgtggctgtgctg
aggctgatgggaaaaggggctgggccccctttggctgccacctcccgtggcaggggcagc
actcggagccgagggcgaggccgtggtgacagctgcttttaccaaagaagcattgaggaa
ggcgatggggcctttggacgcaatcctcgggagatccagcgaagccagagctgggacgac
agaggtgagaggcggtttgagaagtctgcaaggagggatggagtacgatctggctttgag
gagggaggggctggcccgaggaaggagcatgcgcgctcagacagtgagaattggcgctca
cttcgagaggagcaagaggatgatagcagctggagacttggggcaggaccccggcgagat
ggtgatcgctggcgttccaccagtcctgacggtggtccccgctctgctggctggcgggag
catggagagcggaggcgcaagtttgattttgatttgcgaggggaacgcggaggttgtggt
gaagaagatgggcgagttgggggaggcaactcacacctccgaagatgccgggggctggat
ggctttgaagatgacaaggatgggctcccagagtggtgcctggatgatgaggatgaggag
atgggtacttttgatgcttctggagccttcctgcctcttaagaagggccccaaggaacct
attccagaggagcaagagcttgatttccagggcctggaggaagaggaagaggaaccatca
gatggggtggatgaagaggggcctgaggccggagggaaggaagtgaccccattgcctcct
tcagagaagtcgagctccccatcctcactgcctgccttgggccctctctggacagcgaat
gaagatggtgaggcagtggagaaagagctgcccccggctgaaggagacgagatgagggga
ctgcctctaagtccaagaatcagttcccctcctgcaggcccgcctgcagacctagaagat
gaagaaggcttgaagcacttgcaacaggaggcagagaagctggtggcctccctgcaggac
agctccctggaggaggagcagttcactgctgccatgcagacccagggcctacgccactcc
acagccgccactgcccttcccctcagccatggcgctgcccgaaagtggttctacaaggac
ccacagggagagatccaaggccctttcacaacccaggagatggctgagtggttccaggct
ggctacttctccatgtccctcttagtgaagaggggctgcgatgagggtttccagcctctg
ggagaggtgatcaagatgtggggccgtgtgccctttgccccagggccctcgccacccccg
ctgctggggaacatggatcaggagcggctgaagaagcagcaggagctggctgcggcagcc
ctgtaccagcagctgcagcaccagcactttctgcagctggttggcagccgccagctcccg
cagtgtgcgacactccgggaaaaggcagctatgggggacctgacgccgccgcagcagcag
ctcactacgttcctgcagcagctccaggctctcaaaacccccagaggtggggaccagaac
ctgctcccgacaatgagccggtccttgtcggtgccagattcaggccccctctgggactta
catacctcagcttcatcacagtcaggtggtgaggccagtctttgggacataccaattaac
tcttcgactcagggtccaattctagaacaactccagctgcaacacaaatttcaagaacgc
agagaagtggagctcagggtgaagcgggaggaggaggagcgcaaacgccgggaggagaag
cgtcgccagcagcagcagcaggaggagcagaagcggcgtcaggaggaggaggagctcttt
cgacgcaagcaggtgcggcagcaggaactgttgctgaagctgctacagcagcagcaggcg
acgaatgtccctgtgccccctgcacccagctccccacccccactctgggctggcctagcc
aagcagggcctgtccatgaagactctgctggagctgcagatggaaagtgagcgccaactg
cacaagcagccggcaccacgggagcctctgcgggcccaggcccccaaccaccgagtgcaa
cttgggggcttgggcactgcccctctgaaccagtgggtgtctgaggctgggccactgtgg
ggcgggccagacaagagtgggggcagcagcagtggcaacctgggactctgggaagacact
ctcaagagtggcgggagcctggcccgaagcctgggcctaaagaacagtcggagcagcccg
tctctcagtgactcctacagccacctgtcaggtcgacctgttcgcaaaaagaccgaagag
gaagagaagttgctgaagctgctacagggcatccctcggccccaggatggcttcacccaa
tggtgtgagcagatgctgcacactctgagcaccacaagcagcctggatgttcccatggct
gtagcgatcctcaaggaggtggagtccccttatgatgtccatgattatattcgttcctgc
ctgggggacacgctggaagccaaagaatttgccaaacaattcctggagcggagggccaag
cagaaagccagccaacagcggcagcagcaacagcagcagcagcagcagcagcaacagcag
cagcaggaggcctggctgagcagcagctccctacagacagcctttcaggccaaccacagc
accaaactgggccctggggagggcagcaaggccaagaggcgggcgctgatgcttcactct
gaccccagcatcttggggtactccctgcacggcccttccggtgagatcgagagcgtggat
gactactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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