KEGG   Rattus norvegicus (rat): 304486
Entry
304486            CDS       T01003                                 
Symbol
Tctn1
Name
(RefSeq) tectonic-1 precursor
  KO
K19382  tectonic-1/3
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    304486 (Tctn1)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  MKS complex
   304486 (Tctn1)
SSDB
Motif
Pfam: TCTN_DUF1619
Other DBs
NCBI-GeneID: 304486
NCBI-ProteinID: NP_001388059
RGD: 1566266
Ensembl: ENSRNOG00000028523
Position
12:39970554..40003727
AA seq 635 aa
MGSRCLPPLLLVLLNCCTSSSTQVVATPAAATPVVTNEDLNFTEATPVVTNEDLNFTEAT
PVVTNEDLNFTEATPVVTNEDLNFTEATPATLRPSWSPRTPGTPRPPELSGPRPTPVTDV
AALCVCDLLPAQCDINCCCDPDCSPGDFSVFSACSIPVVTGDRQFCSQKAAFYSMNLTAD
PPHRDFKLIDQINPSIFCIHISNYKPALSFANPEVPDENNFDRLMGASGGFTLSAESGVP
STATSDDPQPTKYEYGALLQTAGESSGSFLKLPSPLTSSLCADENPAAFLVNQAFECSRR
VAIEECERMEALSMAHYSSPAILRVPNSTTQVSIKIQSIMYRSLNHTLTQLEGRGILRPS
LVSTGQDRLCSNVVLQVKYSLLYTASGQIQEAGLSLVLGTLISTVSLLQQKFEIHFIQHG
TKPVPLSGNPGYRVGLPLAAGFQPQKGSGIIQTTNRQGQLTILRSTGKQDCLASHGQRAP
VLFGYNVQSGCQLRLTGTIPCGLLAQKMQDLLRGQAFPDYVAAFGNSRAQDVQDWVPVHF
VTHSSNTKGSCQLPVALGIEVKWTKYGSLLNPQARIVNVTAQLISIPEPLPGPERTMVIS
TAVTFVDVSAPAEAGFRAPPTINARLPFSFFFPFV
NT seq 1908 nt   +upstreamnt  +downstreamnt
atggggtcgcggtgtcttccgccgctcctgctggtgctcctaaactgctgcacctcttcg
agcacccaggtcgttgccaccccggctgcggccaccccggtggtgacgaatgaggatctc
aacttcaccgaggccaccccggtggtgacgaatgaggatctcaacttcaccgaggccacc
ccggtggtgacgaatgaggatctcaacttcaccgaggccaccccggtggtgacgaatgag
gatctcaacttcaccgaggccacccccgccactctcagaccctcctggtctcctaggacc
ccgggaactcccaggccaccggagctctctggccccaggcccaccccggtcacggacgtt
gctgctctgtgtgtctgcgacctgcttcctgcacagtgtgatatcaactgctgttgtgac
cctgactgcagccctggggatttcagcgtcttctctgcctgctccatcccagttgtcacg
ggtgatcggcagttttgtagtcagaaggcagccttctactcaatgaatttgacagcagac
ccacctcaccgcgactttaaactcattgaccagatcaacccttccatcttctgtattcat
atttcaaactacaagccggcgctgtcttttgccaatccggaagtgccagatgaaaacaat
tttgatagactgatgggagcatcaggtggctttacactgagtgccgagtcaggagttcct
tccacagccacctcagatgacccacagcccactaaatatgagtatggagcccttctgcag
accgcaggtgaatcttcagggtcatttctgaaactgccttcacctctcacttcatctctg
tgtgcagatgagaaccctgcagcattcctggtgaaccaggccttcgaatgcagccgaagg
gtggccatagaagagtgtgaaagaatggaagctctcagcatggctcactacagcagccct
gccattctgagggtgcctaattcaacgacacaggtctccatcaagatccagtctataatg
tatcggtctctgaatcacacactgacccagttagaaggccgtggtatcctgcggccatct
ctggtcagcactgggcaagacagactctgcagcaacgttgttctccaggtaaagtacagt
ctgctatacacagccagcggccagatccaggaagccggcctctccctcgtgctggggacg
ctcatcagcaccgtgagtctcctgcagcagaagtttgagattcactttattcagcatggc
accaagcctgttcctctcagtggcaaccctggttacagagtgggactcccgctggccgct
ggctttcagcctcagaaggggtctgggattattcagacaacgaacagacaaggccagctt
actattcttcgtagcacaggcaagcaggactgcctggccagccacgggcagcgggctcct
gtgctgtttggctacaatgtgcagtctggctgtcagctcaggttgacaggcaccatccca
tgcgggcttctggcacagaagatgcaggatctgctgagaggccaggccttccctgactac
gtggctgcgtttgggaactcacgagcccaggatgtgcaggactgggtgcctgtgcacttt
gtcacccactcctccaacacgaagggctcttgccagcttcctgtggctttgggtatagaa
gtaaaatggactaagtatgggtccctgctgaacccccaggccaggatagtaaatgtcact
gcccagctcatctcaattccagagcccctcccagggcctgagaggaccatggtcatttcc
actgcagtgacatttgtggatgtgtcagcccctgcagaggcaggcttccgagccccaccc
accatcaatgccaggctgcccttcagcttcttcttcccatttgtatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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