KEGG   Rattus norvegicus (rat): 304555
Entry
304555            CDS       T01003                                 
Symbol
Hps4
Name
(RefSeq) BLOC-3 complex member HPS4
  KO
K20194  Hermansky-Pudlak syndrome 4 protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    304555 (Hps4)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Others
   BLOC-3 complex
    304555 (Hps4)
SSDB
Motif
Pfam: Intu_longin_1 Intu_longin_3
Other DBs
NCBI-GeneID: 304555
NCBI-ProteinID: NP_001100618
RGD: 1308070
Ensembl: ENSRNOG00000000661
UniProt: B5DF28
Position
12:complement(49924444..49955201)
AA seq 661 aa
MANTTPPETKSAAWWNYFFLYDGSKVQGEGDPTRAGICYFYPSQTLLDQQELLCGQLAGV
VRCLWDLSGTPPMLIRLRNLKFALRVDGDYLWALGCGVELSDASCRQFLDQLIGFFHFYM
GPVSLAYKSHPQEELRLQWDTFITQVLRSTSESHRIFNALWNLDRTKVEPLLLLKAALIL
QTCQRSPHVLAGCILYEGLIVNSQLPPSLTAKVLLHHTVAADQRPPGAGAATQETGPALP
PAVQITPVFLSEEEVASLHEFPVEHDPRLEESSFQCPPWDQSTPTGAEDAWTSATVLEPT
PCGGGHSPRLEQERAGPTGLCTEACDRSSDLSGRLQRELCLSQELDLSAMHLSEAQDAFP
PVPASCDLQALCVSRDTPTLPEDTAICSCLDPSPLERPPEGGSLEALADLPLTHGHTHVP
GTEPLPSSRTMVLLPQHPEGVEPGVEPCGSGAQDRLPALARSSHSADSQGPSPSADRTGF
NPSPSGPHAGLMPMNLYTHSVNGLVLSLLAKETLGSDTAAIEEVYHSSLASLNGLEVHLK
ETLPRDETSPTGSTYNFLHYDRIQSVLSANLPLVAAPQNRRFLQAVNLMHSDFAQLPMLY
EMTIRNASTAVYACSNPAQETYFQQLAPTARSSGFPNPQDCAFSLSGKAKQKLLKHGVNL
L
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggccaacaccactcccccagagacaaagtcagcagcgtggtggaactactttttcctg
tacgatggttccaaggtacagggagaaggagacccaaccagagccggcatctgctacttc
tatccctcccagaccctgttagaccagcaggagctgctctgtggccagcttgctggagtt
gtgcgctgcttgtgggacctttccggcaccccgcctatgctcatccgtctgcggaacctc
aagtttgccctcagggtggatggggactacctgtgggctctgggttgtggtgtggagctc
tccgatgccagctgcaggcagtttctggatcagctcattggattttttcatttctacatg
gggcctgtctccctggcctacaagagccatcctcaggaagagctgaggttgcagtgggat
accttcatcacacaagtcctcaggagcaccagcgagtcgcacaggatcttcaatgccctg
tggaacctggaccgcaccaaagtggagcccctgctgctgctgaaggcagccctcatctta
cagacctgccagcgctcaccccatgtgctagctggctgcatcctctatgaaggactgatt
gtgaattcccagctgccaccttccctcactgccaaggtcctgcttcatcacactgtagct
gcagaccagaggccgcctggagcaggagctgccacacaggaaacaggaccagcattaccc
cctgccgtgcagatcacccctgttttcctgagtgaggaggaggtggccagcctccatgag
ttcccagtagagcatgaccctcgactggaggaaagttcatttcagtgccctccctgggat
caaagcacccctactggggcggaagatgcctggacatcagccaccgtcctggagcccaca
ccatgtggtggaggacactcacctaggcttgagcaggagcgtgctgggcccacaggactg
tgcaccgaggcctgtgaccggagctctgatctcagtggcaggctgcagagggaactgtgt
ctctcccaagaactggacttgtctgcaatgcacctttctgaggctcaggacgcattcccg
cctgtgcctgcctcgtgtgatctgcaggctctctgcgtcagccgggacacccccacacta
cctgaagacacagccatttgcagctgcctggacccttcccctcttgagaggccacccgag
ggcggaagcctggaggcgcttgcagaccttcccctcacccatggccacacccacgttcct
ggcacagaacctctccccagcagcagaactatggtacttcttccccaacatcctgagggt
gtagagcccggtgtggagccctgtgggagtggagctcaggacagactcccagccctggca
cgcagttcccactcggctgactctcagggccctagcccctctgcagacagaactggcttc
aatccatccccatctgggccccatgcagggctcatgcccatgaacctctacactcacagt
gtgaacggactagtgctgtccttgctggccaaagagactcttggcagtgatactgcagcc
attgaggaggtgtaccacagcagcctggcatcactgaatgggctggaagtccatctgaag
gagacactgcccagagatgagactagccccacaggtagcacatacaacttcctgcattat
gaccgcatccagagcgtactctcagccaacctgcccctggtggctgctccccagaaccgc
cggtttctgcaggctgtcaacctcatgcactccgactttgcccagctgcctatgctgtat
gagatgaccatcaggaatgcctccacagctgtgtacgcctgcagcaaccctgcccaggag
acctacttccagcagctggcacccactgcccgcagctctggtttcccgaaccctcaggat
tgtgccttcagcctctcgggcaaagccaagcagaagctgctgaagcatggggtaaacctg
ctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (1)   
   RefSeq(pep) (10)   
DNA sequence (13)   
   RefSeq(nuc) (11)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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