KEGG   Rattus norvegicus (rat): 304567
Entry
304567            CDS       T01003                                 
Symbol
Pus1
Name
(RefSeq) pseudouridylate synthase 1 homolog
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    304567 (Pus1)
Enzymes [BR:rno01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     304567 (Pus1)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    304567 (Pus1)
 Prokaryotic type
    304567 (Pus1)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 304567
NCBI-ProteinID: NP_001020734
RGD: 1311871
Ensembl: ENSRNOG00000037500
UniProt: Q4KM92 B1WBN5
Position
12:51539659..51548975
AA seq 423 aa
MGFPRLWAALLRAWGRWTARPGPRVPGLPPMAGNKVPPALPSHQPDRKGRGGWVWEETEH
PAKRVKGGEDEEPPRKLPKRKIVLLMAYSGKGYHGMQRNLGSSQFRTIEDDLVSALVQAG
CIPENHGTDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDILDKINSHLPSHIRILGLK
RVTGGFNSKNKCDARTYCYMLPTFAFAHKDRDVQDESYRLSAETLQQVNRLLGCYKGTHN
FHNFTSQKGPREPSARRYILEMYCEEPFVREGLEFAVIKVKGQSFMMHQIRKMVGLVVAI
VKGYAPESVLERSWGEEKVDVPKAPGLGLVLERVHFEKYNQRFGSDGLHEPLDWAQEEGK
VTAFKEQYIYPTIVSTERDERSMAQWLNTLPIHNFSGTALGADDTGAKVPSSLEGSEGDG
DTD
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgggcttcccccgcctgtgggccgcactgctgagagcctggggacggtggacggcgcgc
ccaggcccgcgcgtgcccggcctgccgcctatggctggaaacaaggtgccaccagcgctg
ccctcacaccagccggacaggaagggccgaggtggctgggtttgggaggagacggagcat
cctgccaagagggtcaagggcggtgaggatgaagagcctccacgcaagctgccaaagcgc
aaaattgtgctgctcatggcctactccggcaagggctaccacggcatgcagaggaatctg
gggtcctcccagttcaggaccatcgaagatgacttggtatctgccttagtccaggcaggt
tgtatccctgaaaaccatggcacagatatgaggaagatgtctttccagcgatgtgctcgc
acagacaagggtgtgtctgcagctgggcaggtggtatccctaaaggtgtggctaattgat
gacatcctggacaagatcaacagccaccttccatcccatattcggattctgggactgaag
agggtcacaggtgggttcaactccaagaacaagtgtgacgccaggacctattgctacatg
ctacctacctttgcctttgctcataaggaccgggatgtacaggatgagagctatcgccta
agtgcagagaccctgcagcaggtcaaccggcttctgggctgctacaaaggcacgcataac
ttccataacttcacatcacagaaggggccgagagagcctagtgcacgccgctacattctg
gagatgtactgcgaggagccctttgttcgggagggcctggagtttgctgtgatcaaggtg
aagggccagagcttcatgatgcaccagatccggaagatggttggcctggtggtagccatt
gtcaagggttatgcccctgagagtgtcctggagcgaagttggggtgaggagaaggtggat
gtgcccaaggcaccagggcttggcttagtcctggagagggttcactttgagaagtacaat
caacgctttggcagtgacgggctgcatgagcccctggactgggcacaggaggaagggaag
gtgactgctttcaaggagcaatacatctaccctaccattgtcagcactgagcgggatgag
cggtccatggcccagtggcttaacactttgccgatccacaacttcagtggcactgcactt
ggagcggatgacacaggtgccaaggtccccagctccctggagggcagtgaaggggatgga
gacactgactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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