KEGG   Rattus norvegicus (rat): 304645
Entry
304645            CDS       T01003                                 
Symbol
Tbc1d9
Name
(RefSeq) TBC1 domain family member 9
  KO
K19951  TBC1 domain family member 8/9
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    304645 (Tbc1d9)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    304645 (Tbc1d9)
 Endosome - Golgi transport
  Rab GTPases and associated proteins
    304645 (Tbc1d9)
SSDB
Motif
Pfam: RabGAP-TBC GRAM EF-hand_1 EF-hand_6 EF-hand_7
Other DBs
NCBI-GeneID: 304645
NCBI-ProteinID: NP_001402001
RGD: 1308221
Ensembl: ENSRNOG00000003496
Position
19:complement(41746732..41855924)
AA seq 1262 aa
MWVNPEEVLLANALWITERANPYFILQRRKGHGGDGGGGGGLAGLLVGTLDVVLDSSARV
APYRILYQTPDSLVYWTIACGGSRKEVTEHWEWLEQNLLQTLSIFENENDVTTFVRGKIQ
GIIAEYNKINDVKEDEDTEKFKEAIVKFHRLFGMPEEEKLVNYYSCSYWKGKVPRQGWMY
LSINHLCFSSFLMGREAKLVIRWVDITQLEKNATLLLPDMIKVSTRSSEHFFSVFLNINE
TFKLMEQLANIAMRQLLDNEGFEQDRSLPKLKKKSPKKVSALKRDLDARAKSERYRALFR
LPKDEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEENLCSLIIPLREVTIVEKA
DSCSVLPSPLSISTRNRMTFLFANLKDRDFLVQRISDFLQQTTSRIYSEFSGSCNSSDDE
VYSRPSSLVSSSPQRSTSSDADGERPFNLNGNSVPTATQTLMTMYRRRSPEEFNPKLAKE
FLKEQAWKIHFAEYGQGICMYRTEKTRELVLKGIPERMRGELWLLLSGAINEKATHPGYY
EDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQA
MNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARDYVPQLYD
CMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALAVLDANVDKLL
GCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLSDDVGPYPAVDIFRLIGTSYEKFG
TIRADLIEQMRFKQRLKVIQTLEDTTKRNVVRTIVTETSFTIDELEELYALFKAEHLTSC
YWGGSSNAPDRHDPSLPYLEQYRIDFEQFKGMFVLLFPWACGTHSDVLASRLFQLLDENG
DSLINFREFVSGLSAACHGDLTEKLKLLYKMHVLPEPSCDQDEPDSAFEATQYFFEDITP
ECTHVVGLDSRGKQSADEGFVTVSLKQDRGKRANSQENRHYLKLWTAENKSKSKNAKDLP
KLNQGQFIELCKTMYNMFSEDPNEQELYHATAAVTSLLLEIGEVGKFFITQPAKEDAVPG
PPCSQAIPGMLFPKKGSSQSYVVESTDPLPASLAGDREEHSLGGQMEDIKLEDSSPRDNG
ACSSMLISDDDTKDDSSMSSYSVLSAGSHEEDKLHCEDIGEDTVLVRSSQGRAALPRSSS
LDRDWAITFEQFLASLLTEPALVRYFDKPVCMMTRVTSAKNIRMMGKPLTSASDYDISAL
SG
NT seq 3789 nt   +upstreamnt  +downstreamnt
atgtgggtgaatcccgaggaggtgctgctggccaacgcgctgtggatcactgagagagcc
aacccctacttcattctgcaacgaaggaagggccacgggggcgacggaggcggcggcggc
ggattggcgggcctcctcgtgggtacccttgacgtagtattggactccagtgcccgtgtc
gcaccgtaccgaatcctctatcagactccggactctctagtctattggaccatcgcctgt
ggtggttccaggaaggaggttaccgagcactgggaatggctcgagcagaatctactgcag
acgctctccatctttgagaacgagaatgatgtcaccacatttgtaagaggaaaaatacag
ggcatcattgcagaatacaacaagatcaacgatgtaaaagaagatgaggacacagagaag
tttaaagaggccatcgtgaagttccatagactgtttgggatgcccgaggaagagaaactc
gtcaactattactcctgtagctactggaaggggaaggtcccccggcagggctggatgtac
ttaagcatcaaccacctgtgtttttcctccttcctgatggggagggaagccaagctggtg
atccggtgggtggacatcactcagctggagaagaacgccacgttgcttctgccggatatg
atcaaagtgagcacacggtccagtgagcatttcttctctgtgttcctcaacatcaatgag
acattcaagctgatggaacagcttgccaacatagccatgaggcagctcttggacaatgaa
ggatttgaacaagaccggtccctgccaaaactcaagaagaaatcacccaagaaagtgtct
gctctgaaacgtgatctggatgccagggcaaagagtgagcgataccgcgccctttttcgg
ctgcccaaagatgaaaagctggacgggcacactgactgcaccctctggaccccgtttaac
aagatgcacattttgggtcagatgtttgtctccacaaattatatctgctttaccagcaag
gaggaaaacctctgcagcctcataattccactccgggaagtaaccatcgtggagaaggct
gacagctgcagtgtgctccccagccctctgtccatcagcaccagaaacaggatgaccttc
ttgttcgccaacttgaaagacagagactttctggtgcaaaggatctcagatttcttgcag
caaacgacttctagaatctactcggagttctcaggaagctgcaacagctcagatgatgag
gtgtattctcggcccagcagccttgtttcctccagtccccagagaagcaccagctcagac
gctgatggagagcgcccctttaaccttaacggcaacagcgtccccacagccacacaaacc
ctcatgaccatgtaccggcggcgatctcctgaagaattcaacccaaaattggccaaagag
tttttgaaagaacaagcctggaagattcactttgctgagtatgggcaggggatctgcatg
taccgcacggagaagacccgcgagctggtgctaaagggcatcccagagcgcatgcgcggg
gagctctggctgctgctttcaggggccatcaatgaaaaggccacacaccccgggtactat
gaggacctggtggagaagtctatgggaaagtacaatcttgccacagaggagattgagaga
gacttacaccgttcccttccagagcacccagctttccagaacgaaatgggcatcgcggct
ctgaggagagtcttaacggcttatgcttttcgaaatcccaacatagggtattgccaggcc
atgaacattgtcacttcagtgctgctgctttatgccaaagaggaggaggccttctggctg
ctggtggccttgtgtgagcgcatgcttccggattactacaacaccagggttgtaggtgcc
ctggtggaccagggagtcttcgaggagctggctcgagactatgtcccccagctgtatgac
tgcatgcaggacctgggggtgatctctaccatctccctgtcatggttcctcacgctcttt
ctcagtgtgatgccatttgagagtgccgtggtggtcgtggactgtttcttctatgaagga
atcaaagtgatattccagctggccctcgctgtactggatgccaatgtggataaactgtta
ggctgcaaggacgatggggaggctatgactgttctgggaaggtacttagacagcgtgacc
aacaaagacagcactctgccacccatccctcatctccactccctgctcagtgacgacgtg
gggccctaccctgcggtggacatcttcagactcataggaacatcctacgagaaatttgga
actatccgggcagatttgattgagcaaatgagatttaagcagaggctgaaagtgatccaa
accctggaggacaccaccaaacgcaatgtggtacggaccattgtgacggagacctccttc
accattgatgagctggaagaactatatgcgcttttcaaggctgaacatctgaccagctgc
tactggggtgggagcagcaatgccccggaccggcacgaccccagcctgccttacctggag
cagtaccgcatcgacttcgagcagttcaagggcatgtttgtgctcctctttccctgggcg
tgtggcactcattctgatgtgctggcctcccgcttgttccagctactggacgagaatggg
gactccttgattaacttccgagagttcgtctctgggctgagtgctgcgtgccatggggac
ctcacagagaaactcaaactcctgtacaaaatgcacgtcttgcctgagccatcctgcgat
caagacgagcccgactctgcctttgaagcgacccagtacttctttgaagatatcacccca
gaatgcacacatgttgttggcttggacagcagaggcaagcagagtgctgatgagggtttc
gtcaccgtgagtctgaagcaggacagagggaaaagggcaaattctcaagagaaccgccac
tatctaaaactctggactgcagaaaataagtcaaagtcaaaaaatgccaaagatttgccc
aagttgaatcaggggcagtttatcgagctctgtaagaccatgtacaacatgttcagtgaa
gaccccaatgaacaggagctgtaccacgccacggctgcggtgaccagcctcctactggag
atcggagaggtcggcaagttcttcattactcagcccgccaaggaagatgcggttcctgga
ccaccctgcagccaggccatccccggcatgctcttccccaagaaggggtccagccagtcc
tatgtggtggaatccacagacccactcccagctagcctggcgggtgacagggaggagcac
tccctgggaggacagatggaggacattaaactagaggactcctcacccagggacaacggg
gcctgctcctccatgttgatctccgatgacgacaccaaggacgacagctccatgtcatcc
tactcggtgctgagtgccggctcccacgaggaggacaaactgcactgtgaggacattggg
gaggacactgtcctggtgcgaagcagtcaggggagagctgccctgcccaggagcagcagc
ctggaccgggactgggccattaccttcgagcagttcctagcctcgctcctgacggagcct
gctctcgtgaggtactttgacaagccggtgtgcatgatgaccagggtcaccagtgcgaag
aatatccgtatgatgggcaagcccctcacctcagccagtgactacgacatctctgccctg
tcaggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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