KEGG   Rattus norvegicus (rat): 304802
Entry
304802            CDS       T01003                                 
Symbol
Optc
Name
(RefSeq) opticin precursor
  KO
K08128  opticin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rno00535]
    304802 (Optc)
Proteoglycans [BR:rno00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class III
    304802 (Optc)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRRNT LRR_9 LRR_5
Other DBs
NCBI-GeneID: 304802
NCBI-ProteinID: NP_001382488
RGD: 1304916
Ensembl: ENSRNOG00000003059
Vega: OTTRNOG00000000637
Position
13:complement(47906145..47920334)
AA seq 347 aa
MYVEWIQPFPLLPFPQNLMKFLTFLSLLTLVLQEAGTASLLGEREREEKSPEEADTYASL
HVGNYSLSLEDYSEVIDLSSYEELADYGDQIPEAKTSSPTLPTRTSPTSPVVPRTLPSRL
TMAGPTTTGLLNSQSSHGLPTCLVCVCLGSSVYCDDANLENIPPLPQMTTYLYARFNHIS
HIQAGDFKGMTKLRRIDLSSNSISSIHNDALRLLPALQDLILPENQLAALPVLPSGLEFL
DVRLNRLQSSGIQPEAFVTLEKLQFLYLADNLLDSIPGPLPLSLRSLHLQNNKIEAMESD
TFCDTTEHRHERRRQLEDIRLDGNPINLSLFPEAYFCLPRLPVGRFT
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgtacgtcgaatggattcagccgttcccactcctacccttccctcagaacctcatgaag
ttcctgactttcctgagtctgttgaccctggtgctgcaggaggcagggacagcgtctctc
ctaggagagagagaaagagaagagaagagccctgaggaagctgacacttatgcatccctg
catgtggggaactatagcctgagcctagaggactacagtgaagtcattgatctgagcagc
tatgaggaacttgcagactatggggaccagatccctgaggccaaaacaagcagtccgact
cttccaacaagaactagtcccactagccctgtggttccaaggacattgccatcacgcctc
acaatggccggacctaccaccactggactactgaactcccagagcagtcacggcctgcct
acctgcctggtctgcgtgtgccttggctcttctgtgtactgtgatgatgcgaacctcgag
aacattcctcctcttccccagatgaccacctacctctacgctcgcttcaaccacatcagc
cacatccaggctggagacttcaaagggatgacaaaactgaggaggatcgatctctccagc
aactccatctcctccatccacaacgatgccctccgcctgctgcctgccctgcaggatctg
atccttccagagaaccagctggcagccctgcctgtgctgcccagtggcctcgagttcctg
gacgtccgcctgaatcggctgcagagctcagggatacagcctgaggccttcgtgacgctg
gagaagctgcagtttctctacctggcggacaacctgctggattccatccctgggcctttg
cccctcagcctgcgctccctgcacctgcagaataacaagattgaggccatggaaagtgac
accttctgtgacaccacggaacacagacatgagcgccgccggcagcttgaagacatccgc
ctggacgggaaccccatcaatctgagccttttcccagaggcctatttttgcctgccacgg
ctccccgtgggccgcttcacctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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