KEGG   Rattus norvegicus (rat): 304859
Entry
304859            CDS       T01003                                 
Symbol
Dhx9
Name
(RefSeq) ATP-dependent RNA helicase A
  KO
K13184  ATP-dependent RNA helicase A [EC:5.6.2.6]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    304859 (Dhx9)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     304859 (Dhx9)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    304859 (Dhx9)
SSDB
Motif
Pfam: dsrm OB_NTP_bind Helicase_C DEAD HA2_N HA2_C Dicer_dimer nSTAND3 AAA_19 ResIII T2SSE AAA_22 AAA_14 ATPase PhoH
Other DBs
NCBI-GeneID: 304859
NCBI-ProteinID: NP_001382485
RGD: 1308548
Ensembl: ENSRNOG00000002735
Position
13:complement(68152813..68189580)
AA seq 1392 aa
MGDIKNFLYAWCGKRKMTPAYEIRAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSN
AARDFVNYLVRINEVKSEEVPAVGIVPPPPILSDTSDSTASTGEGLPPPMGGPLPPHLAL
KAAENNSGVESSSGYGSPGPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGLHGNWT
LENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKL
AAQSCALSLVRQLYHLGVIEAYSGLTKKKEGERVEPYKVFLSPDLELQLQNVVQELDLEI
VPPPVDPSMPVILNIGKLAHFEPSQRQNAVGVVPWSPPQSNWNPWTSSNIDEGPLAYAST
EQISMDLKNELAYQMEQDHNLQSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGK
TTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFES
ILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEV
RIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKDKKKKDKE
DDGGEDDDANCNLICGDEYGPETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFL
PGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAE
TSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC
SRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLR
ELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFISEG
KRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTWEAK
VQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEG
RNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQS
DGQIVFIDDWIRLQISHEAAACITALRAAMEALVVEVSKQPNIISQLDPVNEHMLNTIRQ
ISRPSAAGINLMIGSVRYGDGPRPPKMARYDNGSGYRRGYGGGGYGGGGYGGGYGSGGFG
GGFGSGGGGGFGGGFNSGGGGGFGSGGGGFGSGGGGFGGGGGGFSGGGGGGGFGGGRGGG
GGGGFGGSGGFGSGGGGYGVGGGGYGGGGGSGGYGGGSGGYGGGGGGYGGGEGYNMSPNS
YRGNYGGGGGGYRGGSQGGYRNNFGGDYRGSSGDYRGSGGGYRGSGGFQRRGYGGGYFGQ
GRGGGGGGGGGY
NT seq 4179 nt   +upstreamnt  +downstreamnt
atgggtgatattaaaaattttctgtatgcctggtgtggcaaaaggaagatgactccagcc
tatgaaattagagcagtaggaaacaaaaacagacagaaattcatgtgtgaggttcgagta
gaagggtttaattatgctggtatgggcaattccaccaataagaaagatgcacagagcaat
gctgccagagacttcgttaactatttggttcgaatcaatgaagtcaagagtgaagaagtt
cctgctgttgggattgtaccacccccacccatacttagtgacacatctgatagcacagca
agtactggagaaggcttaccaccacccatgggaggaccacttcctcctcatctggctctc
aaagcagcagaaaataattctggagttgagtcttcatctggctatggttctcctggaccc
acctgggaccgaggagccaacttaaaggattactactcaagaaaggaagagcaagaggtg
caagcgactctagagtcagaagaagtggatttaaatgctgggcttcatggaaactggact
ttggaaaatgctaaggctcgtctgaaccagtatttccaaaaagaaaaaatccaaggagaa
tataagtacacccaagtgggtcccgaccacaacaggagctttattgcagaaatgaccatt
tatatcaagcagttgggcagaaggatttttgcacgtgaacatggatcaaataagaaatta
gcagcacagtcatgtgccctctcactagtccgacaactctatcatcttggagtgattgaa
gcttactctggtcttacaaagaagaaagaaggagagagagtggagccttacaaagttttc
ctttccccagatttggagcttcagttgcaaaatgtggttcaagagctagatctggaaatt
gttcccccacctgttgatccttctatgccagttatactcaacattgggaaattggctcat
tttgaaccatctcagaggcaaaatgcagtgggagtggttccttggtcacccccacagtcc
aactggaatccttggacaagtagcaacattgatgaggggccccttgcttatgcttctaca
gaacaaataagcatggaccttaagaatgaattagcataccagatggaacaggatcataat
ttacagagtgtgttacaagagagagagttgcttcctgtgaagaaatttgaagctgaaatt
ctggaagccattagtcaaaattcagttgtgattatccgaggggctactggttgtggtaaa
accacgcaagttccacaatacattttggatgacttcatccagaatgacagagcagctgag
tgcaatattgttgtgactcagcccagaaggatcagtgcagttgcggtggctgagcgagtt
gcttatgagagaggagaagaacctggaaaaagctgtggctacagtgtccggtttgagtct
atacttccacgccctcatgccagtataatgttttgtactgtaggtgtgctactaagaaaa
ctagaagcaggcattcgaggaatcagtcatgttattgtagatgaaattcatgaaagagat
attaatactgacttcctcttagtagtactgcgtgacgtggttctggcttatcctgaagtt
cgtattgttcttatgtctgcaactattgataccaccatgttctgtgaatatttcttcaat
tgccccatcattgaagtttatggaaggactttcccagttcaagaatattttctggaagat
tgcattcagatgacccaattcattcctcctccaaaggacaagaaaaagaaggataaagag
gatgatggtggtgaagatgatgacgcaaattgcaatctcatatgtggtgacgaatatgga
ccagaaacaaagttgagcatgtctcagttgaatgaaaaggaaactccctttgaacttatt
gaagcactccttaaatacattgaaacccttaatgttcctggagctgtgttggtattttta
cctggctggaacttgatttatactatgcagaagcatttagaaaataactcacatttcgga
agtcaccggtatcagattctacctctccattctcagattcctcgggaggaacagcgcaaa
gtgtttgatccagtaccagatggagtaaccaaggttattttgtccacaaacattgctgaa
acaagcattaccataaatgatgttgtttatgtcattgactcctgcaaacaaaaagtgaaa
ctctttactgctcacaacaatatgaccaactatgctactgtatgggcatcaaaaacaaac
cttgagcaaaggaaagggcgagctggccgtgtacgacctgggttctgtttccacctttgt
agtcgggctcgttttgacagactggagacccacatgacaccagagatgtttagaacacca
ttgcatgaaattgctctgagcataaaacttctgcgcctaggaggaattggccaattcctt
gcaaaggcaattgaacctccacctttggatgcagtaattgaagcagagcatactcttaga
gaacttgatgctttagatgccaatgatgagttgactcctcttggacgaatcctggctaaa
ctccccattgagcctcgttttggaaaaatgatgataatggggtgtattttctatgtggga
gacgctgtctgtaccatctctgctgctacctgctttccagagccctttatcagtgaaggg
aagcgcttggggtacatacatcggaattttgctggaaacagattttctgatcatgtggct
cttttatcagtattccaagcctgggatgatgctaggatgagtggagaagaagcagaaata
cggttttgtgagcagaagagactaaatatggctacactaagaatgacttgggaagccaaa
gtacagcttaaagagatactgattaactctggctttccagaagattgtttattgacacaa
gtgtttactaacactggaccagataataatttggatgttgttatctctttgctggctttt
ggtgtgtaccccaatgtatgctatcataaagagaagagaaagattcttaccactgaaggt
cgtaatgcacttatccacaagtcttctgtgaactgtccttttagcagccaagacatgaag
tacccatctcctttctttgtttttggtgaaaagattcgaacccgagccatctctgctaaa
ggcatgaccttagtgacccctctacaattacttctctttgcctccaagaaagtccagtct
gatggtcagatcgtgtttatagatgactggatcagactgcaaatatcacatgaagctgca
gcatgcatcacagccctccgggcagccatggaagctctggttgttgaagtatccaaacaa
ccaaacattatcagccagttggaccctgtcaatgagcatatgctaaacaccatccgtcag
atttctaggccctcagctgctggtatcaaccttatgattgggagtgtaaggtatggcgat
ggtccgaggcctcccaagatggcccgatacgataatggaagtggatatagaaggggatat
ggaggaggaggatatggtggtggtggatacggtggtggatatggtagtggaggctttgga
ggcggctttggaagtggtggtgggggaggctttggaggaggctttaacagtggtggggga
ggaggctttggtagtggtgggggtggctttggcagtggcggaggtggatttggtggtggg
ggaggaggcttcagtgggggaggtggtgggggtggatttggtggtggccgaggaggcggc
ggcggtggtggctttgggggtagtggaggttttggaagtggtgggggaggctatggtgtt
ggaggtggtggctatggaggtggtggcggtagtggtgggtatggaggaggcagtggagga
tatggaggtggtggagggggttacggaggtggggaaggttataatatgagccccaactct
taccgaggaaattatggtggaggtgggggaggttatagaggaggttcccaaggaggctac
agaaacaacttcggtggagactacagaggatctagtggagactaccggggatctggtggg
ggctatagaggatctggaggattccagcgaaggggttatggaggtggttattttggacaa
ggaagaggaggtggtggtggtggtggtggcggctattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (15)   
   Pfam (15)   
All databases (35)   

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