KEGG   Rattus norvegicus (rat): 304941
Entry
304941            CDS       T01003                                 
Symbol
Pogk
Name
(RefSeq) pogo transposable element with KRAB domain
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: DDE_1 BrkDBD KRAB HTH_Tnp_Tc5 DUF5934
Other DBs
NCBI-GeneID: 304941
NCBI-ProteinID: NP_001100664
RGD: 1308951
Ensembl: ENSRNOG00000032058
UniProt: D3ZV46
Position
13:complement(81180410..81196326)
AA seq 622 aa
MPGHNPRRRLRRRHPLGREMESRAYPLNLTLKEEQKEDEVEIQELEDGPVEMQKVQICSE
GTWVPALFDEVAIYFSDEEWEVLTEQQKALYREVMRMNYETVLSLEFPFPKPDMINRLER
EEECPESDEWRLQGVTFAENEESDFRTPDWANPMNATSHFPQPQHFNSFGLRLPQDITEL
PEWSEGYPFYMAMGFPGYDLSADDLASKFQFSRGMRRSYDAGFKLMVVEHAESTNNCQAA
KQFGVLEKNVRDWRKVKPQLQNAHAMRRAFRGPKNGRFALVDQRVAEYVRYMQAKGDPIT
REAMQLKALEIAQEMNIPEKGFKASLGWCRRMMRRYDLSLRHKVPVPQHLAEDLTEKLVT
YQQSVLALRRTHDYEVAQMGNADETPICLEVPSRVTVDNQGEKPILVKTPGREKLRITAM
LGVLADGRKLPPYIILRGTYIPPGKFPSGMEIRCHRYGWMTEDLMQDWLEVVWRRRTGAV
PKQRGMLILNGFRCHATDSVKTSMESMNTDMVIIPGGLTSQLQVLDVVVYKPLNDSVRAQ
YSNWLLAGNLALSPTGNAKKPPLGLFLEWIMVAWNSISSESIVQGFRKCHISSNLEEEGD
VLWEIEGELPKERGHEGVAEDD
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgccgggtcacaaccctcgtcgccgcttgcggcgacgccacccgctcggccgggaaatg
gagtcccgagcctaccctctaaatttgaccctgaaagaagagcaaaaagaagatgaggtt
gagatccaggaattggaggatggtcccgtagagatgcagaaagtgcaaatctgctcggaa
ggcacgtgggtaccagccctatttgatgaggtggccatatatttttcggatgaggagtgg
gaagttctgacagagcaacaaaaagccctctaccgggaagtcatgaggatgaattatgag
actgtcctgtccctggaattcccattccccaagccagatatgatcaatcggttggaaagg
gaagaggagtgtcctgaatctgatgagtggcggctccagggagtaacctttgcagaaaat
gaagaatctgattttaggactccagattgggccaacccgatgaatgccacctcccatttt
cctcaacctcagcacttcaacagctttgggctgcgtctgccgcaggacatcactgaactg
cctgagtggagtgaggggtaccccttctatatggccatgggcttccctgggtatgacctc
tcagctgacgacttggcgagcaagtttcagttcagtcgcggcatgcgccgcagttacgat
gcggggttcaagctgatggtggtggagcacgctgagagtaccaacaactgtcaggctgcc
aagcagttcggggtgttggaaaagaatgtccgagactggcgcaaagtgaagccacagctc
caaaacgcccatgccatgcggcgggcattccgaggccccaagaatggaagatttgctctg
gtagaccagcgggtggctgagtatgtcagatacatgcaggccaaaggggaccccatcacc
agggaggcaatgcagttgaaagctcttgaaatcgcccaggaaatgaacattccagagaaa
gggttcaaggcaagtctgggctggtgtcggaggatgatgagaaggtatgacctatccctg
aggcataaagtgccagttcctcagcacctggccgaggacctgactgagaagctcgtcact
taccagcagagtgtgcttgctctgcgccggacacacgactatgaggtggcacagatgggc
aatgcagatgaaacacccatctgcttagaagtgccctctagagtgactgttgacaaccag
ggtgaaaagcccatcctggtcaagacaccaggcagggagaaactgaggatcacagccatg
ctgggggtcttggctgatgggaggaagttaccaccatacatcatcttgagggggacatat
atcccccctgggaagtttcccagtggcatggaaatccgctgccaccgctatggatggatg
actgaggacttgatgcaagactggttggaagttgtgtggagacggagaactggagctgta
cccaaacaacgagggatgctgatcctgaatggcttccggtgccatgccaccgactctgtg
aagacttccatggagagtatgaacacagacatggtgattatcccggggggcctgacctcc
cagctgcaggtgctggatgtggttgtctacaagccactgaatgacagtgttcgggcccag
tattccaactggcttctggctgggaacctggcactgagccccactggaaatgctaagaag
ccaccgctgggcctcttcctggagtggatcatggttgcgtggaatagtatctcaagtgaa
tcaattgtccaggggttcagaaagtgccacatctctagcaacttagaggaagaaggtgat
gtcctctgggaaatcgagggcgagttgcccaaagaacgtggtcatgaaggtgtggctgag
gatgactga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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