KEGG   Rattus norvegicus (rat): 304978
Entry
304978            CDS       T01003                                 
Symbol
Copa
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    304978 (Copa)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    304978 (Copa)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    304978 (Copa)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   304978 (Copa)
  Exosomal proteins of bladder cancer cells
   304978 (Copa)
SSDB
Motif
Pfam: COPI_C Coatomer_WDAD WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 304978
NCBI-ProteinID: NP_001128012
RGD: 1310525
Ensembl: ENSRNOG00000006247
UniProt: A6JG21
Position
13:87078853..87119256
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKIQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEAPEGLGEDTLGKGQEEGGGWDVEEDLELPPELDVPSGVAG
GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVVQFGPYKQLFL
QTYARGRTTYQALPCLPSMYSYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLSTVG
KFEDAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLCMEIERKKLPKETLDQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgctaaccaaattcgagaccaaaagcgcgcgggtgaaaggccttagttttcatcctaaa
agaccctggatcctgaccagtttacataatggggtcatccagttatgggactatcggatg
tgcaccctcattgacaaatttgatgaacatgatggtccagtgcgtggcattgacttccat
aagcagcagcccctattcgtctctggaggagatgactataagattaaggtttggaattac
aaacttcggcgctgcctcttcacattgcttgggcacttggattatatccgcacgacgttt
tttcatcatgagtatccttggattctgagcgcctcagatgatcagaccattcgggtgtgg
aactggcagtctagaacctgtgtctgtgtgttaacggggcacaaccattatgtaatgtgt
gctcagttccacccctctgaagacctggtggtatcagctagcctggaccagactgtccgc
gtttgggatatttctggtctaaggaaaaaaaacttgtctcctggtgcggtggagtccgat
gtgagaggaataactggggtcgatctgtttggaactacagatgcagtggtgaagcatgtg
ctagagggccatgaccgtggagtgaattgggctgccttccacccgactatgccccttatt
gtatcgggggcagatgaccggcaagtgaagatatggcgcatgaatgaatcaaaggcatgg
gaggttgacacctgccggggccattacaacaatgtgtcttgtgccgtctttcaccctcgc
caagagttgatcctcagcaattctgaggacaagagtattcgagtctgggatatgtctaag
cggactggggttcagactttccgtagggatcatgatcgcttctgggtcctggctgcccat
cccaaccttaacctctttgcagcaggccatgatggtgggatgattgtatttaagctggaa
cgggagcgtccagcctatgctgttcatggcaatatgctgcattatgtgaaggaccgattc
ctccgtcagctggatttcaacagctccaaagatgtagctgtgatgcagttgcggagtggt
tctaagttcccagtgttcaacatgtcatacaatccagcagagaacgccgtgctgctgtgc
accagagcaagcaatttagagaatagtacctatgatctgtacaccatccccaaagatgca
gactcccagaatcctgatgcccctgaagggaaacgatcctcgggcctgacagcggtttgg
gttgctcggaatcggtttgctgtcctagatcgaatgcactcgcttctgattaaaaacctg
aaaaatgagatcaccaagaaaatccaggtgcccaactgtgatgaaatcttctatgctggt
acaggcaacctcctgcttcgggatgcagattccatcacactctttgatgtccagcagaag
cgaactctggcatcagtgaagatttccaaggtgaaatatgttatctggtcggcagacatg
tctcatgttgcactcctggccaagcatgccattgtgatctgtaaccgcaagctggatgct
ctgtgtaacattcatgagaacattcgtgtcaagagtggggcctgggatgaaagtggggtg
tttatctataccacaagcaaccacatcaaatatgctgtcaccactggggaccatgggatc
atccgaactctggatttgcccatctatgtcacaagagtgaagggcaataacgtatactgc
ctggacagggagtgtcgtcctcgggtgctcaccattgaccccaccgaattcaagttcaaa
ctggccctgatcaacaggaagtatgatgaggtactgcacatggtgaggaacgccaaacta
gtaggccagtcgatcatcgcttacctccagaagaagggttatcctgaagtggcactgcat
tttgtaaaggatgagaaaactcgtttcagcttggccctggagtgtggaaacattgagatt
gctctagaggcagccaaagctctggatgacaagaactgctgggagaagctgggagaagtg
gccctgttacagggcaatcaccagattgtagaaatgtgctatcagcgcaccaaaaacttt
gacaagctctccttcctgtaccttattactggcaacctggagaagcttcgaaagatgatg
aagattgctgagatccgaaaggacatgagtggccattatcagaatgccctgtacctgggt
gatgtgtcagagagagtgcgaatcctgaagaactgtgggcagaaatccctggcctacctc
acagctgctacacatggcttagatgaggaagctgagagcctgaaggagacatttgaccct
gagaaggagacaatcccagatattgatcctaatgccaagctgctccagccaccagcacct
atcatgccattggataccaattggcccttactgactgtgtccaaagggttctttgaaggc
tccattgcaagcaaggggaagggaggcgcgttggctgccgacattgacatcgacactgtt
ggtactgaaggctggggagaggacgcagagctgcagctggacgaagatgggtttgtggag
gctccggaaggtttgggggaggatactctcggcaagggacaagaggaaggaggtggctgg
gacgtagaagaagatttggagctcccacctgagctggatgtaccctctggggttgccggt
ggtgctgaagacggtttctttgtgcccccaaccaagggaacaagcccaactcaaatctgg
tgcaataactcccagcttccagtggatcacatcctggcaggttcttttgaaacagctatg
cggcttcttcatgaccaggtgggagtagtccagtttggcccctataagcaactgtttcta
cagacatacgcgcgaggccgcaccacctaccaagcactgccctgcttgccctccatgtat
agctaccctaatcgcaattggaaggacgcagggctgaagaatggtgtgccggctgtgggc
ctcaagcttaacgacctgatccagcggctgcagctctgttaccagctcagcacagtcggc
aagtttgaagacgctgtggagaaattccgctccatcctactcagtgtgccccttcttgtg
gtggacaataaacaggagattgcagaggcccagcagctcatcaccatctgccgtgagtac
attgtgggtttgtgcatggagatagaaaggaagaagctacctaaggagaccctagaccag
cagaagcgcatctgtgagatggcggcttatttcacacactcaaacctgcagcctgtgcac
atgatcctggtgctgaggacagccctcaacctcttcttcaagctcaagaacttcaagaca
gctgccacctttgcccgacgcctgctggaacttgggcccaaacctgaagtagcccaacag
acaaggaaaatcttgtctgcctgtgagaaaaaccccacagatgcctgccagctcaattat
gacatgcacaacccctttgacatttgtgctgcatcttaccggcccatctaccgtggaaaa
ccagtggagaagtgtccactcagtggggcctgctattcccctgagttcaaagggcagatc
tgcagggtcactacagtgacagagattggcaaagatgtgattggtctgaggatcagtcct
cttcagtttcgctaa

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