KEGG   Rattus norvegicus (rat): 305078
Entry
305078            CDS       T01003                                 
Symbol
Lamb3
Name
(RefSeq) laminin subunit beta-3 precursor
  KO
K06244  laminin, beta 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04151  PI3K-Akt signaling pathway
rno04510  Focal adhesion
rno04512  ECM-receptor interaction
rno05145  Toxoplasmosis
rno05146  Amoebiasis
rno05165  Human papillomavirus infection
rno05200  Pathways in cancer
rno05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    305078 (Lamb3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    305078 (Lamb3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    305078 (Lamb3)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    305078 (Lamb3)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    305078 (Lamb3)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    305078 (Lamb3)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    305078 (Lamb3)
   05145 Toxoplasmosis
    305078 (Lamb3)
SSDB
Motif
Pfam: Laminin_N Laminin_EGF F5_F8_type_C Laminin_II BNR_6
Other DBs
NCBI-GeneID: 305078
NCBI-ProteinID: NP_001094311
RGD: 1562668
Ensembl: ENSRNOG00000006025
UniProt: A6JH29 F1LPI5
Position
13:107362514..107404081
AA seq 1172 aa
MMTALFLLWLALPGLLCAQQPCSRGACYPPVGDLLIGRTQLLRASSTCGLTKPETYCTQY
GQWQMKCCKCDSRLPRNYNSHRVENVVSSSGPMRWWQSQNDVSPVSLQLDLDKRMQLQDI
MMDFKGLMPAGMLIERSSDFGKTWRVYQYLATDCASTFPQVHQGQPKNWQDVRCRPLSQR
PNGHLTGGKVQLNLMDLASAIPASQSKKIQELGDITNLRVNFTKLAPVPQRGSYPPSAYF
AVSQLRLQGSCFCHGHADRCAPNPGGPTGSTTAVQVNDVCVCQHNTAGPNCDRCAPFYNN
RPWRPAEGQDIHECQRCDCNGHSETCHFDPAVFAASQGTSGGVCDNCQDHTEGKNCERCQ
LHYFRNRRPGAPIHETCIPCECDPDGAVPGAPCDRLTGQCVCKDHVQGERCDLCKPGFTG
LTFANPQGCHPCDCSILGTRQDMPCEEETGRCLCLPNVVGPKCDQCAPSHWKLASGRGCE
PCACDPRNSLSSQCNQFTGQCPCREGFGGLTCSSAAIRQCPDRTHGDVATGCRACDCDFR
GTEGPGCDKTSGRCLCRPGLTGPRCDQCQRGYCDRYPVCVACHSCFQAYDTDLQEQAWRL
GSLRNTTEGLGTGTGLEDRGLASRLLDAKSKIEQIRQILGGTSVTERDVAQVANAILSIR
RTLQGLPLDLPLEEEMESFSGDLGNLDRSFNRLLLMYRSKKEQFEKLSSVDPSGAFRMLT
MAYEQSSRAAQQVSDSSSLLSQLRDSRREVEGLERQTGEGGAGGAQLMALRLEMASLPDL
TPTINKLCGGSRQTACTPGDCPGLLCPQDNGTACGSHCRGALPRARGALHMAGQVAEQLR
SFNTQLQQTRQMIRAAEEAASKVQSDAQRLETQVSTSRLQMEEDVRRTRLLIQQVRGFLT
DPHTDAATIQQVSEAVLALWLPTDSATVLRKMKEIQDIAARLPNVDLVLSQTKQDIARAR
RLQAEAEKARSRAHVVEGQVDDVVGNLRQGTVALQEAQDTMQGTGRSLRLIQERVTEVQQ
VLVPAERLVKGMKEQMSGFWARVKELRHQAQEEQAQAMKAQQLAEGASNQAMNAQEGFER
LKQRYTELKDRLGQSSMLGEQGNRILSIKAEAEELFGETMEMMDKMKDMESELLRGSQAI
MLRSADLSGLEKRVEQIRSYINGRVLYYATCK
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgatgacggcacttttcctcttgtggcttgccttgcctggcctcctgtgtgcccagcaa
ccctgctcccgaggggcctgttatccacctgttggggacttgctcattggaaggactcag
cttcttcgagcctcgtctacctgtggattgaccaagcctgagacctattgcacccaatat
ggacagtggcagatgaaatgctgcaagtgtgactccaggctgcctcgcaactacaacagt
caccgagtggagaacgttgtatcgtcttcaggccccatgcgctggtggcagtcccagaac
gatgtgagccctgtctctcttcaactggacctagacaagaggatgcagcttcaggacata
atgatggattttaagggtctcatgccagctggcatgttgattgagcgctcttctgacttt
ggcaagacatggagggtgtaccagtacctggcgacagactgtgccagcacctttccccag
gtccaccagggccagcccaagaactggcaggacgtccggtgccggcccttgtcccagagg
cctaatgggcatctgactgggggaaaggtccaacttaaccttatggatttggcatcagct
atccctgcatctcaaagtaaaaagattcaagaactaggagacatcacgaacttgagagtc
aacttcaccaagctggccccagtgccccagaggggctcctatccacccagcgcctacttt
gcagtatcacagctacgtctacaggggagttgcttctgtcatggacatgccgaccgctgt
gcccctaatcctggaggccctacaggttccaccaccgctgtgcaggtcaacgatgtctgt
gtctgccagcacaacacagctggccccaactgtgaccgctgcgcccccttctacaacaac
cggccatggagacctgcagagggacaggacatccatgagtgccaaaggtgtgactgcaat
gggcactcagagacctgccacttcgacccagctgtgtttgctgctagccaagggacaagt
ggaggcgtgtgtgacaactgccaggaccacacagagggcaagaactgtgagcgatgtcag
ctacactatttccggaatagacgaccaggcgctcccattcatgagacctgtattccctgc
gagtgtgatccagacggggcagtcccaggagctccctgtgaccgactgacgggccagtgc
gtgtgcaaagaccacgtgcaaggggagcgctgtgatctttgcaagcctggtttcacaggg
ctcaccttcgccaacccacagggctgccatccctgtgactgcagcatcttaggtacccgg
caagatatgccttgtgaggaggaaactggacgctgcttgtgtcttcccaatgtagtgggc
cccaaatgtgaccagtgcgccccttcccactggaagctggccagcggccggggctgtgag
ccctgtgcctgtgacccacgcaactccctcagctcccagtgcaaccagtttacagggcag
tgtccttgtcgggaagggtttggtggcctcacatgtagttctgcagccattcgtcagtgt
cccgaccggacccatggagacgtggccacagggtgccgagcctgtgactgtgacttcaga
ggaaccgagggtcctggctgtgacaaaacctcaggccgttgcctctgccgccccggcttg
acagggccccgctgcgaccagtgccaacgaggctactgcgaccgctacccagtgtgtgtg
gcctgccactcttgcttccaggcctatgacacagacctccaggagcaggcttggcgcctt
ggcagtctccgtaataccactgaaggcctgggcacagggacaggtctggaggaccgtggc
ctggcttctcggttgctagatgccaagagcaaaatcgagcagatcagacagattctgggt
ggcacctctgtcacagagcgggatgtggctcaagtggccaatgccatcctgtctatcagg
aggactcttcagggcctgcccctggacctacccttagaggaggagatggaatccttctct
ggagacctggggaatctagacagaagcttcaatcgcctcctccttatgtaccggagcaag
aaggagcagtttgagaagctaagcagtgtggacccttcaggagccttccgcatgctgact
atggcttatgagcagtcctcccgggctgcacagcaagtatccgacagttccagcctgctg
agccagctgagggacagtcgcagagaggtagaaggtctggagagacagactggagaggga
ggagctggaggagctcagctcatggccctgcgcctagagatggcttcactgcctgacttg
acacccaccatcaacaagctctgtggtggctctaggcagacagcctgcaccccaggagac
tgccctggattgctgtgtccccaggacaatggtacagcctgtggctctcactgcagggga
gccctgcccagagccagaggggccttacacatggcagggcaggtagctgagcagctacga
agcttcaatacccagctccagcagaccaggcaaatgatcagggcagctgaggaggcagca
tcaaaggtccaatcagatgcccagcgccttgagactcaggtgagtaccagccgcttacag
atggaggaagatgtccggcgcacacggcttctcatccagcaggtccggggcttcctcaca
gaccctcacacagatgcagccaccatccaacaggtgagcgaggcagtgctggctctctgg
ctgcccacagactcagctacagtgctacgcaagatgaaagagatccaggacattgctgcc
aggctccctaacgtggacttagtgctatcccagactaagcaggacattgcacgggcccgc
aggctccaggctgaggccgagaaggccagaagccgagcccacgttgtggaagggcaggtg
gatgacgtggtcgggaacctcaggcagggcaccgtggctctgcaggaggctcaggacact
atgcagggcactggccgctctcttcggctcatccaggaaagggttactgaggttcagcag
gtcctggtaccagctgaaaggctggtgaaaggcatgaaggaacagatgagtggattctgg
gcacgggtgaaggagctccgccatcaggcccaggaagagcaggcacaggcaatgaaggcc
cagcagcttgcagagggtgccagcaatcaggccatgaatgctcaggagggctttgagaga
cttaagcaaaggtatacagagttgaaagaccggctgggtcagagttctatgctgggtgag
caaggcaatcggatcttgagcatcaaggcggaggcagaggagctctttggggaaaccatg
gaaatgatggataaaatgaaagacatggagtcagagctgcttcgagggagtcaggccatc
atgcttcgttcagcagacctgtcggggctggagaagcgcgtggagcagatccgcagttac
atcaacgggcgtgtgctgtactatgccacctgcaagtga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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