KEGG   Rattus norvegicus (rat): 305152
Entry
305152            CDS       T01003                                 
Symbol
Aff1
Name
(RefSeq) AF4/FMR2 family member 1
  KO
K15184  AF4/FMR2 family member 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    305152 (Aff1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    305152 (Aff1)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     305152 (Aff1)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int BRD4_CDT
Other DBs
NCBI-GeneID: 305152
NCBI-ProteinID: NP_001100676
RGD: 1307940
Ensembl: ENSRNOG00000002232
UniProt: A6K5U8
Position
14:complement(6165864..6328848)
AA seq 1170 aa
METKIRPGERGKFACLYNEDRNLLRIREKERRNQEAHQEKEAFPEKAPLFAEPYKTAKGD
ELSSRIQTMLGDYEEMKEFLSSKSHPHRLDGSEDRPGKPRYPSCHDRGSGASGSFRTHVY
HQPTHTSAPGSLSVSNVSQSPKMAQPRMEPVPSLHAKIYGAPDGPRPAQDRLSQGHCSRK
CDRRAEGDSERKLSPFISSLPSPVPPLSPAHSRPQATSKAHGSGTGTQSCYASKPSKDPV
VTAQEKETPLDSLVAVTSLGAAPPQPPCQTFPPPPLPSKSIAMQQKPTAYVRPMDGQDQA
PSESPELKPPLEDFGQQSFEKPDLKVPAKAKLTRLRMPSQTVEQPYSNEVHCVEEILKEM
THSWPSPLTAIHTPSTAEPSRFPFPTKDPLHISSATQSQKQYDAPSKTHPNPQQGTSMLE
DDLQLSDSEESDVEQAVEKPPSPPAPPSAPQTIPEPVASAHSSSAESESSESDSSSDSES
ESSSSDSEENEPLETQAPEPEPPTTNKWQLDNWLTKVNQPSVPLESRGSTESPRCRQESK
GGGEGSSDQQHPDSKDPPLKSSSKALRGPSEGPQPGKRNCPKSPAQQETPPPRQTVGSKQ
PRKPTKGSTQAEQPQASSRVEGEAGPVAYGSKEQTSKDKPKVKTKGRPRAVGSREPKSEV
PVPVPQAAVPKPQPPAPTPIEKRKHKSSTAPSKALSGPQPTKDSAGDRNQEHPALVSLTQ
SQGQPNSGRGSGGGRTSGCRQAVITQEDSCRDKLLLPLRDTKLLSPLRDSPPPTSLVVKI
TLDLLTRVPQPPGKGGRPRKSEHKQLPAGKKQDLEARGCDSSSRVTKKRKAEPEKEHSHK
RLRLDKSQTSSSSSSHAESSKSKTPRPSSECSRKEMLPPPPVVPSSSSSSSSSQKPSKPA
HKRPRPDADIGSQDPPRSSGSTKSSCTDSSVPKHRKVQARDSEHKGSSGDAANPFPVPSL
PNGNSKPGKPQVKSDRQQADFHMKEAKKLKCKAEAMVDKAGKAFKYLEAVLSFIECGMAT
ESESSAKSAYTVYSETVDLIKFVMSLKSFSDNTVPAQEKIFAVLCLRCQSLLNMAMFRCK
KDTVMKYSRTLSEHFRSTSKVAQAPSPCVARQVHRRSVPRLPNAFSCQLCWIPDECWQQY
GGHGGDGHRQHPGHHPEHDLLLCHHHIPCP
NT seq 3513 nt   +upstreamnt  +downstreamnt
atggaaactaaaattcgccctggagagagagggaaatttgcctgcttgtacaatgaagac
agaaacctgcttcgaatcagagagaaggaaaggcgcaaccaagaggcccaccaggagaaa
gaggcgtttcctgagaaggctccactgtttgcagagccctacaagaccgcgaaaggcgat
gagctgtcgagtcgcatacagaccatgctaggtgactatgaagagatgaaggagttccta
agcagcaagtcccaccctcaccgcctggacggctctgaggacaggccggggaagcccaga
tacccctcgtgtcacgaccgggggagcggtgcatccggctccttccgcacacatgtctac
caccagcctacccacacttctgctcccggatcactttctgtcagcaacgtcagccaaagt
ccaaagatggcacagcccaggatggagccggtgccaagtctccatgccaaaatctacgga
gcgcccgatggcccccgtccggctcaagatcgcctcagtcaggggcattgttccagaaag
tgtgaccgaagagccgagggagactcggagaggaagctctcgcccttcatctcctccttg
ccgtcccccgtgcccccactctcacctgcacattccaggccgcaggcaaccagcaaggct
cacggcagcggaactggcactcagagctgctatgcctccaagccttccaaggacccggtg
gtgacggcccaagagaaggagactcctctcgacagtctggtggcagttaccagccttgga
gcagcccctcctcagccaccttgccaaacatttccaccacctcccctcccctcaaaaagc
atcgcaatgcagcagaagcccacagcgtacgtccgtcccatggacggtcaggaccaggct
cctagcgagtcccctgagctgaagccgccgctggaggactttggtcagcaaagctttgag
aaaccggaccttaaagtgcctgccaaagccaagctcactagactaaggatgccctcgcag
acggtagagcagccgtactccaatgaagtccactgtgttgaagagattctgaaggaaatg
acccactcgtggccgtctcctctgactgccatacacacacccagtacagccgagccgtcc
agatttcctttccctacaaaggatcctctgcacatcagttctgcaacccaaagccaaaaa
caatacgatgcaccttcaaaaacccaccccaacccccagcaaggaacatccatgctcgag
gatgacctgcagctcagtgacagtgaggaaagcgacgtggagcaagccgtggagaagcct
ccgtccccacctgcacctccaagtgctccgcagacgattcccgagcccgtggcctcagca
cattccagtagtgcagagtcagagagcagcgagtcagacagttcctccgactctgagagc
gagagcagctccagcgacagtgaggagaacgagcccctggaaacacaggctcccgagcct
gagcctccgacaacaaacaaatggcagctggacaactggttgaccaaagtcaaccaacca
tcagtgcccctagagagccgggggagcacagagtctccacgatgtcgccaggaaagtaag
ggtggtggtgagggcagcagtgaccagcagcatcctgattccaaagaccctcccctgaag
agttccagcaaagctctccggggtccctctgaggggccgcagcctgggaagaggaactgt
ccgaagtcccctgctcaacaggaaacccccccacctcggcaaactgtgggcagtaaacaa
cccagaaaacccaccaagggctccacccaggcagagcagccccaggccagctctcgagtg
gagggcgaagcaggacccgtagcctatggctcaaaggagcagacatccaaagacaaaccc
aaggtgaagacgaaaggcaggccccgtgctgtgggcagtcgggagcccaaatctgaggtc
cccgtacctgtgcctcaggcagctgtgcccaagccgcagccacctgcgcccacccccatc
gagaagaggaaacataagagttccacagccccctccaaggcactctcaggccctcagcca
accaaggacagtgctggggacaggaaccaggagcaccctgcccttgtctccttgactcag
agccagggtcaacccaacagcggcaggggcagcggtggtggcaggactagtggttgccgg
caggccgtgatcacccaggaggacagctgtagagacaagctcctgttgcctttgagagac
accaaactgctctcgccgctcagggactctccaccaccgacaagcttggtggtgaagata
accttagaccttctcacgagggttccgcagccaccggggaaggggggccgccccaggaag
tcagagcacaagcagctgccagcagggaagaagcaggacttggaggcaaggggctgtgac
agttccagccgagtcaccaagaagagaaaggctgaaccggagaaagagcacagtcacaag
aggctccgactggataagtcgcagacgtcctcatcctcgtcttcccacgcagagtcttcc
aagtcaaagacacccaggccctcctcagagtgctcaagaaaggaaatgcttcctcctccg
ccggtggtgccctcatcctcgtcgtcttcctcgtcttcccagaagccaagcaaacctgca
cacaagaggcccaggccagatgcagacatcggtagccaggaccctcccagaagttctggc
agcacgaagagcagctgtacagactcttcagttccgaagcacagaaaagtacaggcccgg
gactctgaacacaaaggatcttctggagatgctgcgaatccttttccagtgccttctttg
ccaaatggtaactctaagccaggaaagccacaggtgaaatctgacagacaacaagctgac
tttcacatgaaggaggctaaaaagctgaagtgcaaggcggaggcaatggtggacaaggct
ggaaaagccttcaagtatttggaagccgtcctgtcttttattgagtgtggaatggccacc
gagtcagagagttcagcgaagtcagcgtacaccgtgtactcagaaaccgtagacctcatt
aagttcgtgatgtcgcttaaatccttctcagataacacagtgccagcacaagagaagata
tttgctgtcttatgcttgcgttgccagtcccttttgaacatggcgatgttccgatgtaaa
aaggacacggtgatgaagtattcccgtacccttagcgagcacttcaggagtacctccaaa
gtggcccaggcaccttctccatgcgtggcaaggcaagttcacaggcgttccgtcccccgt
ctccccaatgccttctcctgccagctctgctggatcccagacgagtgctggcagcagtat
gggggccatgggggcgacggccaccgtcagcaccccggtcaccatccagaacatgacctc
ctcttatgtcaccatcacatcccatgtccttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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