KEGG   Rattus norvegicus (rat): 305171
Entry
305171            CDS       T01003                                 
Symbol
Lin54
Name
(RefSeq) protein lin-54 homolog
  KO
K21776  protein lin-54
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    305171 (Lin54)
SSDB
Motif
Pfam: TCR MSL2-CXC
Other DBs
NCBI-GeneID: 305171
NCBI-ProteinID: NP_001094034
RGD: 1311361
Ensembl: ENSRNOG00000002203
UniProt: Q641Z1 A6K5Z8
Position
14:9434093..9514091
AA seq 749 aa
MEVVPAEVNSLLPDDIMDTAITLVDEDSIEAVIVSSPIPMETELEEIVSINSTGDSTATP
ISTEPITVYSNHTNQVAVNTTVSKADSNTTVKPAFPSGLQKLGAQTPVTISANQIILNKV
SQTSDLKLGNQTLKPDGQKLILTTLGKSGSPIVLALPHSQLPQAQKVTAQAQPGDAKLPP
QQIKVVTIGGRPEVKPAIGVSALTPGSQLINTTTQPSVLQTQQLKTVQIAKKPRTPTSGP
VITKLIFAKPINSKAVTGQTTQASPPVVTGRVLSQSAPGTPSKTITISESGVIGSTLNST
TQTPNKIAISPLKSPNKTVKSAVQTITVGGMSTSQFKTIIPLAAAPNVQPIQVPGSKFHY
VRLVTATTAGSSAPPVSQSPSVNTQPLQQAKPVVVNTTPVRMSVPFVQAQAVKQVVPKPI
NSTSQIVTTSQPQQRLIMPATPLPQIQPNLTNLPPGTVLAPAPGTGNVGYAVLPAQYVTQ
LQQSSYVSIAGNSNFTGTSGIQTQARVSFNGIIPSESASRPRKPCNCTKSLCLKLYCDCF
ANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRRHSKGCN
CKRSGCLKNYCECYEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQTAAKT
KLSSQISDLLTRPTPALNSGGGKLPFTFVTKEVAEATCNCLLAQAEQADKKGKSKAAAER
MILEEFGRCLMSVINSAGKAKSDPCAMHC
NT seq 2250 nt   +upstreamnt  +downstreamnt
atggaggtggtgccggccgaggtgaatagcttgcttccagacgacataatggacactgct
attactttagtggatgaggatagcattgaggctgtaattgtgtcatccccaattcccatg
gagacagaactggaagaaattgtcagcataaattctactggtgactctacagccacgccc
atttccacggaaccaatcacagtgtacagtaatcacactaaccaagttgcagtgaatacc
acagtttctaaagcagactccaataccacagtgaaaccagcatttccgagtggccttcaa
aagcttggtgctcagactcctgtgactatatcagccaatcagattattttaaacaaagta
tcacagacatctgatcttaaacttggcaatcagacccttaaaccagatggacagaagtta
atcttaacaactttgggcaagtctggctcaccaattgttttagcacttccccatagccaa
ctaccccaggctcagaaagttacagctcaggcccaaccaggagacgctaagttaccaccg
cagcagatcaaagtagttaccattggagggaggccagaggtgaaacctgccattggggtc
tcagcactgaccccaggaagtcaactgattaataccacaactcagccctctgtgttacag
acccaacagttaaaaacagtgcagattgctaagaagcctcgaacaccaacctcgggtcca
gtgatcacgaagctgatttttgcaaaaccaattaatagtaaagcagttacgggacagaca
actcaagcgtctccacccgtcgtcacaggcagggttctttcacagtctgctcctggaact
ccatccaagactataacaatatcagaaagtggtgttattggctcaactttaaattctaca
acacagacaccaaataagatagccatctcacctttgaagtcaccaaataagacagtgaag
tcggctgtgcagaccatcacggtgggcggaatgagcacgtcgcagtttaagaccatcatt
cccctggcagctgctcccaatgtccagcccattcaagtgcctggaagcaagtttcattat
gtccgactcgtcactgccacaaccgccggtagctcagccccaccagtcagtcagagtccc
agtgtcaacactcagcctcttcagcaagcaaagccagtggttgttaataccacgcctgta
cggatgtcagttccatttgtccaagctcaggccgttaagcaagttgttccaaaaccaatc
aattcaacttcacaaattgtaactactagccagccccagcaacggctcatcatgccggcc
acaccactgcctcagatccagcccaacctcactaacctgccgccaggcactgtgttggcg
ccagctccaggaacggggaacgtgggctacgcagtgcttccggctcagtacgtcactcag
ttgcagcagtcctcctacgtgtcgatagcaggcaactctaacttcaccgggacatcgggc
atccagacacaggcaagggtttcattcaacggcataattccatcagagtctgccagtcgg
cccagaaaaccctgtaactgtacaaaatcactgtgtttgaaattatactgtgactgcttt
gccaatggtgaattctgcaacaactgcaattgtaccaattgttacaacaacttagagcat
gagaatgagcgacaaaaggcaataaaggcatgccttgacagaaacccggaagccttcaag
ccaaagataggaaaaggaaaagagggggagtcggatcggcggcacagcaaaggctgtaac
tgcaaacggtcagggtgtcttaaaaactactgcgagtgctatgaggcaaaaatcatgtgc
tcctccatatgcaagtgcatcggctgtaagaacttcgaagaaagcccagaacggaagaca
ttgatgcacttagcagatgcggctgaagtaagggtccagcagcagacagcagcgaagacc
aagctgtcctctcagatctcagacctgcttaccaggcccacccccgctctgaacagtgga
ggaggaaaattgccattcacatttgtaactaaagaagtagctgaagccacgtgtaactgc
cttcttgcccaggcagagcaggcagacaagaaggggaaatcaaaggcggcagcagagcgg
atgatcctggaggagtttggacggtgtttgatgagcgtcatcaactctgcaggaaaagca
aaaagtgacccctgtgccatgcactgctaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (16)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (13)   
DNA sequence (21)   
   RefSeq(nuc) (13)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (48)   

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