KEGG   Rattus norvegicus (rat): 305198
Entry
305198            CDS       T01003                                 
Symbol
Prdm8
Name
(RefSeq) PR domain zinc finger protein 8
  KO
K20797  PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    305198 (Prdm8)
   03036 Chromosome and associated proteins [BR:rno03036]
    305198 (Prdm8)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    305198 (Prdm8)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     305198 (Prdm8)
SSDB
Motif
Pfam: PRDM2_PR zf-C2H2_4 zf-C2H2 SET DUF5810 zf-C2H2_2 zf-C2H2_9 zf-C2H2_6
Other DBs
NCBI-GeneID: 305198
NCBI-ProteinID: NP_001358896
RGD: 1311628
Ensembl: ENSRNOG00000002004
Position
14:complement(11708477..11728111)
AA seq 689 aa
MEDSGIQRGIWEGDAKAVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFVAL
KSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSARDKEEQNLEAYIKNGQLFYRSLRRI
AKDEELLVWYGKELTELLLLCPSRSHKMNGSSPYTCLECSQRFQFEFPYVAHLRFRCPKR
LHSTDANPQSEQGGGVGTKDQGGGGGKEQQQQQQQQQQQQQETPLIPGPKFCKAGPIHHY
PASSPEASNPPGAAGAGSAKPSTDFHNLARELENARGGSSCSAAPGVGGGGSGHQEAELS
PDGVAAGGCKGKRRFLEEVAAEGGGAGLAGGRARFSERPLATSKEELVCTPQQYRTAGSY
FGLEENGRLFGPPSPETGEAKRSAFVEVKKAARTAGLQEEATATDGAGGTAEDPDVGSGV
ASGGNGSSTPVAGSPGTAEKLLAPRPGGALPGRLEGGSPARGSAFTSVSQLGGGGGAGTA
GTAGSSGGGQAAASDERKSAFSQPARSFSQLSPLVLGQKLGALEPCHPGDGVGPTRLYQA
AADPLAVKLQGAADLNGACGPLASGGGGGLPKQSPFLYATAFWPKSSAAAAAAAAAAAGP
LQLQLPSALTLLPPSFTSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYAMEPLVKR
RREEKLKCPICNESFRERHHLSRHMTSHN
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggaggattcaggcatccagagaggcatctgggaaggagatgccaaggctgtccaacaa
tgtctgacagacatttttaccagtgtgtatacaacctgtgatatcccagagaatgccata
ttcggtccctgtgttctgagccatacctccctgtatgacagcatagccttcgtagccctc
aagtccacggacaagagaacggtaccttacatcttccgggtagacacttcggcggcaaac
ggttcctctgaaggtctcatgtggctgcggctggtccaatcagcccgagataaggaagag
cagaatctcgaagcttatataaaaaacggacagctgttctaccgctctctccgcaggatt
gccaaagatgaagagttgttagtttggtatgggaaagaactgactgagttgctcttgctc
tgcccgtctagatctcacaaaatgaacgggtcatctccttacacatgcctggaatgcagc
caacgtttccagtttgagttcccctacgtggcacatctgcgattccgctgccccaagaga
cttcacagcactgatgccaatccccaaagcgagcaagggggcggcgtgggcaccaaggac
caaggcggcggtggtggtaaagagcagcagcagcagcaacagcagcagcaacagcagcaa
caggagacgccattgatcccgggccccaagttctgcaaagccggccccatacaccactac
cccgcgtcgtccccggaggcgagcaacccgccgggtgccgcgggtgccggtagcgccaag
ccgtccacggacttccacaacctggctcgggaacttgaaaacgcccggggaggcagcagc
tgctcggcggccccgggcgtcggcggtggcggcagcggccaccaggaggcggagctgagt
cccgatggcgtcgctgcgggcggctgcaagggcaagaggcggttcctggaggaggtggcg
gcggagggcggcggcgcggggctggcgggcggccgtgcgcgcttctccgagcggccgctg
gcgacctccaaggaggagctggtgtgcacgccgcagcagtaccgcaccgcgggcagctac
ttcggcctggaggagaacggccggctcttcgggccacccagccccgagaccggcgaggca
aagcgcagcgccttcgtggaggtgaagaaggcggcccgcactgcgggcttgcaggaggag
gcgacggcgacagacggcgcagggggcacggccgaggacccggacgtgggaagcggtgtc
gccagtggcggcaacggctcgtccactcccgtggcagggtcgcccgggactgccgagaaa
ctgctggccccgcgtcctggaggcgcgctgcccggccggctggagggcgggagcccggcg
cgcggcagcgcattcacctcggtgtcgcagctgggcggcggtggcggcgcggggaccgcg
gggaccgcggggagttccgggggcggccaagcggccgcgtcggacgagcgtaagagcgcc
ttctcgcagcccgcgcgctctttctcgcagctgtccccgctggtcctgggccagaagctg
ggcgcgctggaaccctgtcacccgggagacggcgtgggtcccaccagactctaccaggcc
gccgctgatccgctggctgtgaagctgcagggggccgcggacctgaacggagcctgcggg
cccctggcgagcggcggcggcggcggcttgcccaagcagagccccttcctctacgccacc
gccttctggcccaagagttcggctgccgctgcagccgcggcggcagcggccgcggggccc
ctgcagctgcaactgccctcggcgctcaccctgctgccgccctccttcacctcgctgtgt
ctgcccgcgcagaactggtgcgccaagtgcaacgcctccttccgcatgacctccgaccta
gtgtaccacatgcggtctcaccacaaaaaggagtatgccatggagcccctggtgaagcgg
cggcgggaggagaaactcaagtgccccatttgcaacgagtccttcagggagcgtcaccac
ctgtccaggcacatgacctcgcataattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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