KEGG   Rattus norvegicus (rat): 305464
Entry
305464            CDS       T01003                                 
Symbol
Depdc5
Name
(RefSeq) GATOR complex protein DEPDC5
  KO
K20404  SEA/GATOR complex protein SEA1/DEPDC5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    305464 (Depdc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    305464 (Depdc5)
Membrane trafficking [BR:rno04131]
 Autophagy
  Other autophagy associated proteins
   SEACIT/GATOR1 complex
    305464 (Depdc5)
SSDB
Motif
Pfam: DEPDC5_CTD IML1 DEP
Other DBs
NCBI-GeneID: 305464
NCBI-ProteinID: NP_001100699
RGD: 1311535
Ensembl: ENSRNOG00000018144
UniProt: A6IK73
Position
14:complement(81956777..82087392)
AA seq 1456 aa
MWRLKKSLVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEETRVVFRSTSAMVYI
FIQMSCEMWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSIDE
FPEVNRASIQQDHKGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAGGF
PQGDNSTSAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILT
KQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNRSVPRDSRLGDDYNIPHWINHSFYTSKSQ
LFCNSFTPRIKLAGKKSATEKTKNGRDTSLGAPKESENTLPIQVDYDAYDAQVFRLPGPS
RAQRLATCRSVREQENHNRKSASSCDVSSSPSLPSRALPTEEVRSQASDDSSLGKSTNIL
MIPNPHLHQYEVSSSLGYTSTRDVLENMIEPPQRDSSAPGRFHVGSAESMLHVRPGGYTP
QRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSRQRDPTH
SSAELLELAYHEAAGRHSTSRQPGDSMSLNFSGTEELSVSLLSNSGTGMNPRNQNKDSLE
DGVSTSPDPMPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPEADM
DRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQPKTQKPSTTVPPPLSSSPLYSRGLVSR
NRPEEEGQYWLSMGRTFHKVTLKDKMITVTRYLPKYPYESAQIHYTYSLCPSHSDSEFVS
CWVEFCHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACVTATKRITEGE
VHCDIYGDKPRADEDEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGTAMKGLQMTGPISA
HSLESTGPPVGKKGTSALSALLEMEASQKSLGEQQTSVHGKSSTQPAENSSVAMTPTYVD
SPRKASVDQTAPLVLDSTSLGVSTCQSVDRGNNQTFGNSQNIEQAFPSTGSGDGSSQQHI
ASSLTSSSTLVEILEAMKHPSTGVQLLSEQKGLSPCCFISAEVVHWLMNNVEGVQTQAMG
IDIMQKMLEEQLIAHASGEAWRTFVYGFYFYKIVTDREPERVAMQQPSAPWHTAGVDDFA
SFQRKWFEVAFVAEELVHSEIPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAAT
VPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWMAVTATVLFEMVQGWHR
KATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNLGCLLKEGSEHLFDSFEPETYWD
RMHLFQEAIAHRFGFVQDKYSASAFNFPAENKPQYIHVTGTVFLQLPYSKRKFSGQQRRR
RNSTSSTNQNMFCEERVGYNWAYNTMLTKTWRSSATGDEKFADRLLKDFTDFCINRDNRL
VTFWTNCLEKMHASAP
NT seq 4371 nt   +upstreamnt  +downstreamnt
atgtggcgactaaagaaaagtttggtgagcacctgtgcctatatcacccagaaagtggaa
tttgctggcatcagggcacaggctggtgagctgtgggtcaagaatgagaaggtcatgtgt
ggttacattagtgaagagaccagggtggtgttccgttctacgtcggctatggtttacata
tttattcagatgagctgtgaaatgtgggattttgatatttatggggatctgtactttgag
aaagctgtgaatggtttccttgccgacctgtttactaagtggaaggagaagaactgtagc
catgaagtgactgtggttctgttttctagaactttttatgatgcaaaatctattgatgaa
tttcctgaagtaaaccgagcttcaattcaacaggatcataaagggagattctacgaggac
ttttacaaagtggtggtgcagaacgagagaagggaagagtggacgtcactccttgtgacc
attaagaaactcttcatccagtatccagtgttggttcgactggaacaggcagggggcttt
cctcaaggagacaattctacctcagcacaaggaaactacctagaggccatcaacttgtca
ttcaatgtgtttgacaagcactacatcaaccgaaactttgaccgaactgggcagatgtcc
gtggtgatcacgccgggggtgggtgtctttgaagtggaccgcctcctcatgatcttgacc
aagcagcggatgatcgataatggaattggtgtggacttagtgtgcatgggagagcagcca
ttacacgctgtgccattattcaagctgcacaaccggagtgtgccacgggattctcggctg
ggcgatgactataatattcctcactggataaaccacagtttctacacatccaaaagccag
ctgttttgtaacagtttcactccaaggataaaactggcaggaaagaagtctgccactgag
aaaaccaaaaatggccgtgatacatctcttggggctccaaaggaatctgaaaacaccctt
cccatccaagtagattatgatgcctacgatgcccaagtattccggctgcctggtccatcc
cgggcccagcgactcgccacctgcaggtctgtgagagagcaggaaaatcacaatcgcaaa
agtgccagctcctgtgacgtctcctccagcccttccttgccaagccgtgcactgcccact
gaggaagtgaggagccaggcttcagacgacagctccctgggcaagagcaccaacatcctg
atgatccctaacccccatctgcaccagtatgaagtcagcagctcactgggctacaccagc
acccgagatgtcctggagaacatgatagaaccaccacagcgggactctagtgcacctgga
aggttccacgtgggcagtgcagagtccatgctacatgttcgacctggaggctacacccct
cagagagcactgattaaccccttcgccccctcaagaatgcccatgaagctcacctccaac
agaaggcgctggatgcatacttttcctgtaggaccatctggagaggccatccagatccat
catcaaacccggcaaaacatggcagagctgcagggcagcaggcagcgggaccccacccac
tcctctgcagaactgttggagctggcatatcatgaagccgcaggaaggcacagcacttcc
cgacagcctggtgacagcatgtccttgaacttcagtggaacggaagagctttctgtcagc
ctgcttagcaacagcggcacaggtatgaatcctaggaaccagaataaggactctctagag
gatggtgtttctacctctccagacccaatgccaggcttctgttgcacagttggagtggat
tggaagtctcttactactcctgcatgccttcccctcaccactgactacttcccggaccgt
cagggcctgcagaatgactacacagagggctgctatgatctcctcccagaagcagacatg
gacaggagggacgaggagggcgttcaaatgacagcccagcaagtgtttgaagagttcatc
tgccagcgtctcatgcagggttaccaaatcatagtacagccaaagacccagaagcccagc
actacagtcccacccccgctgagcagtagcccactctatagcagaggccttgtgtcccga
aaccgccctgaagaggagggccagtattggctgagtatgggcagaaccttccataaggtg
acacttaaggacaagatgatcacagtgactcgttaccttcccaagtacccttatgaatct
gcccagatccattacacctacagcctctgcccttcccactctgactcagagtttgtctcc
tgttgggtggaattctgccatgaacggctagaggaatacaagtggaattacttagatcag
tacatttgttctgccggctccgaagatttcagcttaatcgagtctctgaagttctggaga
acccgatttctactactgccagcctgtgtcactgccaccaagcgcatcacagaaggggaa
gtgcactgtgacatctacggggacaaaccccgtgcagatgaagatgagtggcagcttcta
gatggctttattcgctttgtagagggcttgaaccgcatccgcaggcgccaccggtcagac
cgcatgattcggaaagggactgccatgaaaggcttgcagatgaccgggcccatctccgca
cactctctcgagtcaacgggccccccagtcgggaagaaaggaacctcagctctgtctgcc
ctgctggagatggaggctagtcagaagagcctaggagaacagcagacaagtgtgcatggg
aaaagctctactcagccagctgagaacagcagtgttgccatgactcccacctatgtggac
agcccacgcaaggcatctgtggaccaaacagctcctctggtgttggacagcaccagttta
ggggtcagcacgtgccagtccgtggatagaggcaataaccagacctttgggaactcccag
aacatagaacaggcctttccctctacaggctctggagacggcagctctcagcagcacata
gccagctctctgacatcgtcctctaccctggtggagatcctggaagccatgaagcatccc
tcgacaggagtccagctgctgtctgagcagaagggcctttcgccgtgctgcttcatcagt
gcggaggtcgtacactggctgatgaacaatgtggagggggtccagacgcaggcgatgggc
atcgacatcatgcagaaaatgctggaagagcagctcatagcgcatgcatctggagaagca
tggcgaaccttcgtctacggcttctatttctacaagatagtcacggacagagagcccgaa
cgagtggctatgcagcagccctctgccccatggcacacagcaggagtggatgactttgcc
agcttccaacgcaagtggtttgaggtggcctttgtggcagaagagcttgtgcactccgag
attcctgccttcctcctgccctggctacctagccggccagcctcttacgcaagcaggcac
agctcctttagccgaagttttggaggacggagccaggcagctgcactgttagctgccact
gtcccagagcagaggactgtgaccctggatgtcgatgtgaacaaccgaacggaccggctg
gagtggtgcagctgttactaccacggaaacttctctctcaacgcagcctttgaaatcaag
ctacactggatggcagtgactgccacagtgctgtttgagatggtccaaggttggcatcga
aaagctacatcctgcggcttcttgttagtcccggttttggagggtccttttgcactgccc
agttacctgtacggtgaccccttgagggcccagctcttcatcccgctcaacctcggctgc
ttgctcaaggagggcagcgagcacctgttcgatagctttgaaccagagacatattgggat
cgaatgcaccttttccaggaagccattgcacacaggtttggatttgtgcaagataaatat
tctgcctccgcgtttaacttccctgctgagaataaaccacagtatatccacgtcacagga
acagtgtttcttcagctgccgtactccaaacgcaagttttctgggcagcagcggcggcga
cggaactctaccagctccaccaaccaaaacatgttctgtgaggagcgggttggctacaac
tgggcctataacaccatgctgaccaagacatggcgctctagtgccacgggggatgagaag
tttgccgatcggctgctgaaggacttcacggatttctgtatcaaccgtgacaaccgcctg
gtcacattctggacaaactgcctggagaagatgcacgccagcgctccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (33)   
   UniProt (1)   
   RefSeq(pep) (32)   
DNA sequence (34)   
   RefSeq(nuc) (32)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (80)   

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