KEGG   Rattus norvegicus (rat): 305675
Entry
305675            CDS       T01003                                 
Symbol
Synpo2l
Name
(RefSeq) synaptopodin 2-like protein isoform 1
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: PDZ PDZ_6 Calsarcin PDZ_2
Other DBs
NCBI-GeneID: 305675
NCBI-ProteinID: NP_001292067
RGD: 1565434
Ensembl: ENSRNOG00000008949
UniProt: D3ZZ68
Position
15:3681224..3690673
AA seq 978 aa
MGAEEEVQVTLAGGAPWGFRLQGGAEQRKPLQVSKIRRRSQAGRSGLRERDQLLSINGVS
CTDFSHASAMTLIDASGHQLVLTVRRVAEEGSVRSPSPGELQMLSPLSPLSPEPPGAPVT
QAPQPGSLRSPPDSEAYYGETDSDVDGPATHEKPRRTRRRGPPRPSLPGAPPDEVYLSDS
PAEPAPVKTGSPSQGDSRVSSPSWEEGSALQPPPAEALLLPHGPLRPGPHLIPMVGPVPH
PVAEDLTTTYTQKAKQAKLQRAESLQEKSVKEAKTKCRTIASLLTAAPNPHSKGVLMFKK
RRQRAKKYTLVSFGAAAGTGTEEEEDGIPPTSESELDEEAFSDARSLTNQSDWDSPYLDM
ELARAGSGIAESQSSGLGGQLSEVSGRGVQLFEQQRQRVASSSQELAQVGPAAMLNGQSL
QSPPRAQSAPPEAAVLPLSPLSAPAASPSPFQDGGAPSPAPSIFNRSARPFTPGLPGQRS
GTTSVIFRPVAPKKVNEALGGTSPAPSPFAASLQGPTPLPSFTTVVPNRTPVSGTSSSTQ
RSSGPVTATSSLYIPAPSRPVTPGGAPEPPTPPSAAAMTSTASIFLSTPLRNSARPEAPG
TAAPEPASAREQRISVPAARTGILQEARRRGTRKQMFRPGKEETKNSPNPELLSLVQNLD
EKPRAGGAESGPEEDALSLGAEACNFMQPLGGRSYKTLSQVSPKTPPPMAPKTPPPMTPK
TPPPVAPKPGSRGLPDGLVNGSTSMVGIPELPRLQGRGGELFAKRQSRADRYVVEATPGS
SLNPGLRPRSPSPTPSLPPSWKYSPNIRAPPPIAYNPLLSPFFPQAARTLPNKAQSQGPR
ATPKQGIKALDFMRHQPYQLKTAMFCFDEGPSTPASTSGPPKTARVQEIRRFSTPAPQPT
AEPLAPTVLAPRAATTLDEPIWRAELASSPVPNPDHLESLRSFAATPTSCGFQVARPRFS
ATRTGLQAHVWRPGAGHH
NT seq 2937 nt   +upstreamnt  +downstreamnt
atgggtgctgaggaggaggtgcaggtcacattagcagggggagcaccctggggcttccgg
cttcaagggggggccgaacagaggaaacctttacaggtatctaagatccgaagacgcagc
caggccggcagatcaggactccgggagagggaccagctcttatcgatcaacggggtttct
tgcaccgacttctcccatgccagtgccatgaccctcatcgatgcctcagggcatcagctt
gtccttactgtgaggagggtagcagaggaagggtctgtgagatctccgtctccaggagag
cttcagatgctgtcacccttatctccattgagtcctgagcccccgggtgctcctgtcacc
caagctcctcagccagggagccttcgatcaccccctgacagtgaggcttactatggagag
acagacagtgatgtggatggccctgccacacatgagaagccacgcagaacccgccgccga
ggtcctccaaggccttcccttccaggagctccacctgatgaggtgtacctgtctgacagc
cccgcagaaccagcgcctgttaaaactggctctcccagccagggtgacagccgtgtaagc
tccccatcttgggaggaagggtcagcccttcagccaccaccagcagaggcccttctgtta
ccccatggtccactccggcctggtcctcatctcatccctatggtgggccctgtcccccac
ccagtggcagaagatctcactaccacctatacccagaaggccaagcaagccaaactgcaa
cgcgcggaaagcctccaagagaagagtgtgaaggaggccaagaccaaatgccggaccatt
gcatccctactgacggcagcccccaaccctcactccaagggggtgcttatgtttaagaag
cggcggcagagagccaagaagtacaccctagtgagtttcggggctgcagctgggacagga
acagaggaggaggaggacggcatccccccaacgagtgagtcggagctggacgaggaggcc
ttctcagatgcccgcagccttactaatcaatccgactgggacagcccttatctagacatg
gagctggctagggctggctcaggcatagcagagagtcagagctctggactgggaggacag
ctaagtgaggtctctggccgaggggtacagctctttgaacagcagcgccaaagggtagcc
tccagctcccaggagctggctcaggtgggcccagcagccatgcttaatgggcagagtctg
cagtccccacctcgagctcagagtgctcccccagaggcagcggtgcttccactcagccct
ttgtcagcccctgcagccagccctagcccctttcaggatggtggagcccccagccctgcg
ccaagtatctttaacaggtcagcgagaccttttaccccaggtttaccagggcaacggtca
ggcaccacctcagtgattttccgacccgtagcccctaagaaggttaatgaggccttgggg
ggcactagccccgccccgtcccccttcgcagcttctctacaggggcccacccctctgccc
agcttcaccactgtggtgcccaaccgcacgccggtctctggaacctccagcagcacccaa
cgctcctccggtcctgtgaccgctaccagctccttgtacatcccagccccgagccggccc
gttacaccaggaggtgccccagagcctcccactcctcctagcgctgctgccatgacctcc
actgcttccatattcttgtccactcctctgagaaactctgcgcgcccggaggcacccggc
acggcggcccccgagcctgccagcgctcgggagcagcgcatctctgtgccggctgcccgc
accggcatcctgcaggaggctcggcgccggggaacccgcaaacagatgttccggcctgga
aaggaagagacgaagaactcgcccaaccccgagctgctatcgctggtacagaacctggat
gaaaaacctcgggcgggcggtgcggaatctggtccggaggaggacgctttaagcctcgga
gcagaagcctgtaacttcatgcagccactagggggcaggagttacaagaccctgtctcaa
gtgtcaccgaaaaccccacctccaatggctcccaaaaccccaccccctatgacgcctaag
actccaccccctgtggctcctaaacccgggtctcgagggctccctgacgggctagtgaat
ggatcgacctctatggttgggattcctgagctcccaaggctgcaggggaggggtggggag
ctatttgccaaacggcagagccgtgccgaccggtacgtggtggaagctacacctggctct
agccttaatccaggccttcgccctagaagtccttctcccacaccctcactgcccccatcc
tggaaatactcacccaacatccgtgccccacctcctattgcttacaacccacttctctca
ccctttttccctcaggctgcccgaactctccccaataaggctcaatcccagggacctcgg
gcgacccctaagcagggtatcaaggccctggatttcatgcggcatcagccataccaactt
aaaactgccatgttttgttttgacgagggtccttcaactcctgcctccacttcagggcct
cccaaaactgcccgagtccaggagatccgcagattttccactccggcgccccaacccact
gcagaacccttggctcccactgtgcttgcccccagagcggctaccaccttggacgagccc
atttggagggcagagttggcctcatcccctgtccctaacccggaccatctagagtctctc
aggagctttgcggccactcccacttcctgcggcttccaagtagccaggccgcggttctca
gccaccagaacagggttgcaggctcatgtctggagacctggggcagggcaccactga

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Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (54)   

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