KEGG   Rattus norvegicus (rat): 305827
Entry
305827            CDS       T01003                                 
Symbol
Wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    305827 (Wdhd1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    305827 (Wdhd1)
SSDB
Motif
Pfam: Mcl1_mid Ctf4_C WD40 ANAPC4_WD40 HMG_box eIF2A NBCH_WD40 Nup160
Other DBs
NCBI-GeneID: 305827
NCBI-ProteinID: NP_001100725
RGD: 1310200
Ensembl: ENSRNOG00000011167
UniProt: A6KE41
Position
15:complement(22957492..23002820)
AA seq 1117 aa
MPAIQKPMRYGHTEGHTEVCFDDSGSFIVTCGSDGDVRMWEDLDDDDPKSVNVGEKAFSC
ALKNGKLVTAVSNNTVQVYTFPEGAPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVKV
VDVMDNSQQQTFRGHDAPVLSLSFDPKDVFLASASCDGTVRVWNISDQTCAASWPVLRKS
NDVVNSESICRLAWQPKTGKFLAVPVEKSVKLYRRETWSNPFDLSDSSVTQTLNIVTWSP
CGQYLAAGAINGLIVVWNVETKECMERVKHEKGYAICGLAWHPTYSRICYTDVEGNLGIL
ENVCDLSGKLSSNKVPSGVEKDYSDLFDGDDTSSAGDFLNDNAVEIPSFSKGIRNEEDDN
DDLMLAADHVLGDDENSVDVTMLRNDLHREEGEDRQASSLHSLPLVKSQRPLYDGPMPTP
RQKPFQPSSTPLHLTHRFMAWNSVGIIRCYNDDQDSAIDVEFHDTSIHHATHLSNAFNYT
MGSLSHEAVLLACESADELASKLHCLHFSSWDSSKEWIVDMPENEDIEAICLGLGWAAAA
TSALLLRLFTIGGVQKEVFCLPGPVVSMAGHGEQLCIVYHRGTGFDGDQCLGVQLLELGR
KKKQVLHGDPLPLTRKSYLTWLGFSAEGTPCYVDSEGCVRMLNRGLGNTWTPVCNIREHC
KGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILPFKLPYCQTSTEKGQMEEQ
FWHSVLFHNYLDYLAENGYDYEESIKKQAVKEQQELLMKMLALSCKLEREFRCVELADLM
TQNAVHLAIKYASRSRKLILAQKLSELAAEKAAELAEIQTEEREEDFRERLNAGYSHTTT
EWSQPRVRSQVEEDAEDREDTVSEGNPEPQNHGQNLIQSANSSDTPAMKSGAVFSSSQGR
VNPFKVLVSSKEPAVSVNATRSANILDNMNKLSRKSTSFNRVANNEKSPVIKPLIPKPRC
KQASAASYFQKRTSQAEKTEEVKENPKSSSSEAPAVCLQNSEVQRPKTGFQMWLEENRSH
IMSDNPDISDEADIIKEGMIRFRVLSAEERKEWTNKAKGGTASDGAEAKKRKRGVSEICE
TEKQEEAVKENLELSKKQKALDLSTNQKLSAFAFKQE
NT seq 3354 nt   +upstreamnt  +downstreamnt
atgccggccatacagaagcccatgaggtacggacatacagaaggacacaccgaagtctgc
tttgatgattctggaagttttattgtgacttgtggaagtgatggtgatgtgaggatgtgg
gaagatttggacgacgacgatcctaagtccgttaatgttggagaaaaggcattttcatgt
gctttgaagaatgggaaattggtcactgcagtttctaacaataccgtccaagtctataca
ttccctgaaggagcacccgatggtatattaacacgcttcactacaaacgcaaaccatgtg
gtcttcaatggggacggcactaaaattgctgctgggtcaagtgattttctggtcaaagtc
gtggatgtgatggataacagccagcagcaaacatttcgaggacacgacgcccctgtttta
agtctgtcttttgatcctaaggatgtctttctggcatcagctagttgtgatggaaccgtc
agagtgtggaatatatctgatcagacttgtgctgctagctggccggtactgcgaaagagc
aatgatgtggtgaactcggagtccatctgcagactcgcatggcagcccaagaccgggaag
tttctagcagttcctgttgaaaaatctgttaagctgtacagaagagaaacttggagtaat
ccgtttgacctttcagacagttctgtcacccagacactcaatatcgtgacctggtctccc
tgtgggcagtatttggctgcaggtgctattaatggcttaattgtagtttggaatgtggaa
accaaagagtgcatggaaagagtaaaacacgagaaaggttatgcaatctgcggcctggcc
tggcatcctacctatagtcggatatgttacactgatgtggaaggaaacctgggaatcctg
gaaaatgtttgtgacctcagtgggaagttgtcaagcaataaggtacctagtggagtggaa
aaggattacagcgatctctttgatggagacgacacgagcagtgccggcgattttctgaat
gacaacgcggttgagatcccttcattttcaaaggggattagaaacgaggaggatgataat
gatgacctcatgctggcggcagatcatgtcttgggagatgatgaaaactcagttgatgtt
acaatgctaagaaatgatcttcatagagaggaaggggaagatcgccaggcaagcagtctt
cacagtctcccccttgtgaaatcccaaaggccgctttatgacgggcccatgccaacaccg
agacagaagccgttccagccaagttctacacccttgcatctcactcacagattcatggcg
tggaactctgttgggattattcgctgctataacgatgatcaagacagtgccatagacgtg
gagttccatgacacctccatccatcatgcaacccatctatccaatgctttcaactacacc
atgggcagtctttcccacgaagctgttctgttggcttgtgaaagtgccgatgaattagca
agcaagcttcactgcttgcacttcagttcttgggattcaagcaaagagtggatagtagat
atgcctgagaatgaggatatcgaagccatatgtctcgggctgggctgggccgccgctgct
acctctgccctgctcctccgactgtttactattggaggcgttcagaaggaagtcttctgc
cttcctggacctgtggtgtccatggcgggacacggagaacagctttgcattgtttatcac
agaggtacagggttcgatggagatcagtgccttggagttcaactgctagagctggggcgg
aagaaaaaacaggttttgcatggtgaccctcttcctcttacaaggaaatcctaccttaca
tggctggggttttctgctgaaggtaccccctgctacgtggactccgaaggctgtgtgcga
atgcttaacagaggacttgggaatacatggactcctgtatgtaacatcagagagcactgc
aaaggaaagtctgatcactactgggtggttggcattcatgagaacccccagcagctaagg
tgcatcccttgtaaaggttctcggtttcctcccacccttccacgacctgctgtagcaata
ttaccttttaaacttccttattgtcagacttcaacagagaaaggccaaatggaggaacaa
ttttggcattcggttctgtttcacaactaccttgattacttggctgaaaatggttatgat
tatgaggagagcattaaaaaacaggcagtaaaagagcagcaggaactcttaatgaagatg
cttgcgctgtcttgtaaactggaacgagaattccgctgtgtggaacttgcagatctaatg
actcaaaatgctgtgcatttagccattaaatatgcttctcgctctcggaaattaatattg
gctcaaaaacttagtgaacttgccgcagaaaaggcagccgagttggcagaaatccagaca
gaagagagagaagaggatttcagagaaagactgaatgctggttacagccataccactaca
gagtggagtcagccacgggtcagaagtcaagttgaagaagatgctgaggacagagaagac
accgtttcagaaggaaatccagagccacagaaccatgggcagaacttaatccaaagtgca
aattcctctgataccccagctatgaaatcaggtgcagttttctctagcagccaaggacgg
gtaaaccccttcaaggtactagtcagttccaaagaaccagccgtctcagtgaatgcaaca
cgctcagctaatattttagacaatatgaacaaattatccaggaagtccacttcttttaat
cgagtagcaaataatgaaaagtctccagttataaagcctctcattcccaagccaaggtgt
aagcaggcgtctgcagcatcctatttccagaaaagaacctcacaggccgagaagactgaa
gaagtaaaagaaaatcctaaaagttcgtcatctgaagctccagccgtgtgccttcaaaac
tcagaagtccaaaggccgaagaccgggttccagatgtggctggaggaaaatagaagtcat
attatgtccgacaaccctgacatttcagatgaagcagatataataaaagaggggatgatc
cgatttagagtactgtccgccgaagaaaggaaggaatggactaacaaggccaagggagga
actgccagcgatggagctgaggcaaagaagcgaaaacgtggggtcagtgagatctgtgag
acggagaagcaggaagaggcagtgaaggagaatctggagctgtctaaaaagcaaaaggca
ttagatctttctactaatcagaaattgtcagcttttgcatttaagcaggaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system