KEGG   Rattus norvegicus (rat): 305896
Entry
305896            CDS       T01003                                 
Symbol
Irf9
Name
(RefSeq) interferon regulatory factor 9
  KO
K04693  interferon regulatory factor 9
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04217  Necroptosis
rno04380  Osteoclast differentiation
rno04620  Toll-like receptor signaling pathway
rno04621  NOD-like receptor signaling pathway
rno04625  C-type lectin receptor signaling pathway
rno04630  JAK-STAT signaling pathway
rno05160  Hepatitis C
rno05162  Measles
rno05164  Influenza A
rno05165  Human papillomavirus infection
rno05167  Kaposi sarcoma-associated herpesvirus infection
rno05168  Herpes simplex virus 1 infection
rno05169  Epstein-Barr virus infection
rno05171  Coronavirus disease - COVID-19
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    305896 (Irf9)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    305896 (Irf9)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    305896 (Irf9)
   04621 NOD-like receptor signaling pathway
    305896 (Irf9)
   04625 C-type lectin receptor signaling pathway
    305896 (Irf9)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    305896 (Irf9)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    305896 (Irf9)
  09172 Infectious disease: viral
   05160 Hepatitis C
    305896 (Irf9)
   05171 Coronavirus disease - COVID-19
    305896 (Irf9)
   05164 Influenza A
    305896 (Irf9)
   05162 Measles
    305896 (Irf9)
   05168 Herpes simplex virus 1 infection
    305896 (Irf9)
   05167 Kaposi sarcoma-associated herpesvirus infection
    305896 (Irf9)
   05169 Epstein-Barr virus infection
    305896 (Irf9)
   05165 Human papillomavirus infection
    305896 (Irf9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    305896 (Irf9)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    305896 (Irf9)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 305896
NCBI-ProteinID: NP_001012041
RGD: 1308766
Ensembl: ENSRNOG00000019478
UniProt: Q68FP4
Position
15:33065422..33071881
AA seq 398 aa
MATGKARCTRKLRNWIVEQVESGQFPGVCWDDAAKTMFRIPWKHAGKQDFREDQDAAIFK
AWALFKEKHKDGDIGNPAVWKTRLRCALNKSSEFEEVPERGRMDVAEPYKVYRILPAGTL
PTQPRNQKSPFKRSISSVSPERGECKENGIVSHSDSGSNVCGGGSNGGGSSDSCGSTSSS
ELEEGAGTTEATVQEDPVFMENPLPPNSDYSLLLTFIYGGRVVHEIQVHSLDCRLVAEPS
DPESSMVQQVVFPRPDPLEPTQSLLNQLERGILVASNSRGLFVQRLCPIPISWNAPEAPP
GPGPHLLPSNKCVELFSTTYFCRDLAQYFQGQGPLPKYQATLHFWDRSPSSSYTQENLIT
VRMEQAFARNLLEKIPEEEKAALFLVQHTEHQPATLAL
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggccacaggcaaagcacgctgtacccgaaagctccggaactggatagtggaacaggtg
gaaagtgggcagttcccaggggtgtgctgggacgacgcagccaagaccatgttccggatt
ccctggaagcacgcaggcaagcaagacttccgagaagaccaggatgctgccatattcaag
gcctgggcactgtttaaggaaaagcacaaagacggggacataggaaaccctgctgtctgg
aagactcgcctacgctgtgccctcaacaagagttccgaatttgaggaggttcccgagaga
ggccggatggatgttgcagaaccctacaaagtatatcgaatactgccagcaggaaccctc
cccacccaaccaagaaaccagaaatcgccattcaagcgaagtatcagttctgtgtcacct
gagaggggagagtgtaaggaaaatgggattgtaagccactcagacagcggcagcaatgtc
tgtggtggtggcagcaacggtggcggcagcagtgacagctgtggcagcaccagcagctct
gagctagaggaaggagctggcacaactgaagccaccgttcaagaggacccagtgttcatg
gagaatccgcttcctccgaactcagactactcgctgctgctcaccttcatctatggcggg
cgcgtggtgcatgagatccaggtgcacagcctagactgtcggcttgtggctgagccctca
gacccggagagcagcatggtgcagcaggtggtgtttcccagacctgacccactggagccc
acccagagcctgctgaatcagctcgagagaggcatcctggtggccagcaattccagaggc
ctctttgttcagcgcctctgccccatccccatctcctggaacgcacccgaggccccacct
gggcctgggcctcatctgctgcccagcaataagtgtgtggagctcttcagtaccacatac
ttctgtagagatttggcccagtacttccagggccagggacctctacccaagtaccaagca
acactgcatttctgggacaggagtcctagctctagctatacccaagagaatcttatcacg
gtgcggatggagcaggcctttgcccgaaatttactagagaagattccagaagaggagaaa
gctgccttgttcctggtacagcacacagagcaccaacctgccactctcgcactctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (15)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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