KEGG   Rattus norvegicus (rat): 305908
Entry
305908            CDS       T01003                                 
Symbol
Rnf17
Name
(RefSeq) RING finger protein 17
  KO
K18405  tudor domain-containing protein 1/4/6/7
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    305908 (Rnf17)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    305908 (Rnf17)
SSDB
Motif
Pfam: TUDOR SNase TRAF3_RING zf-RING_UBOX eIF-5a
Other DBs
NCBI-GeneID: 305908
NCBI-ProteinID: NP_001178614
RGD: 1310486
Ensembl: ENSRNOG00000008059
UniProt: D3ZLP2
Position
15:34603448..34741658
AA seq 1640 aa
MAAEASSTGLASCHLAGSKSGAPGASGCQCTRCGRKASFASGHHHEYPCGHAFCELCLLA
PQEYTTSKCTDCEVRTTVTMNQGHYPVDGFIKEDSSVEALPPKMVNNCSSGLEKTVDQLI
INLEHSSSIHRNVSSPSAVMSETEEIDEALKIAGCNSEQLSNAIKMLDSTQDQTRQETGS
LREVVEKQFDTLIASLDSRKKSLCEELVRRTDDYLSKLVTVKSYIEEKKSDLDAAMKIAK
ELKSAPSLRTYCDLTQIIRTLKLNFESELSQVSSIIPRNPPRLNINCSEVICMFNSMGKI
EFEDSTKCHPQENEVGQNVQKKFNSKKELCCDVYSSLEKKRVDTVVLADEAPVPPLQAET
PDRHLEGENKQPQKEVLVVASPKTVAVLPQLGSSPDVIIEEIIEENLESCFTDEPIETPR
YPKKPPQKELSAPVASKAGCPELVFVSHVTHPCHFYVRKYSQIKDAAMLEKKMKQVCSKS
LHLDPSDTLELGARIFVNSIKNRMWCRGIITEIIPTKTKNVRKPCSPTKFSVCEISLIQI
FMVDFGNSEVLIITGVGDTHVGPEHVGEQHITLSDFCLLVRKSEPYSEELLKDIPHLAHL
CSLKDIVPYNSSEGWEKEAKVEFLKMVNKKAVLMKVFGEEDDILIVDLQKPPTNKISSDM
PVSLRDALVFMELARFRSQSLRSHGENNTALCYRPPALPEEMTEVSVMVCHINSPTDFYL
QLMENLDFLSLLKTIEEFYKGEDGENLEILCPLQNQACVAKFEDGIWYRAKVIGLPGHRE
VEVKYVDFGNTAKITLKDMRKIKDEFLEPPEKAIKCKLAFIEPSKRSHWSKKAKEKFEEK
TQDKFVTCSVIKILENGVLLVELFDSRAPGTSAVSINEQLVKEGLASYEAGYTLKDNSKK
HLEVWDPSPEEIISSEINSLSPLSVNSLANESFQSLYNKELPVSICNVLSPEKIYVQWLL
TENLLTSLEEKMVAAYEHSEWKPVKWECDMHCAVKIPAKSQWRRGQIIRMVTDTLVEVLL
YDVGIELVVNIHCLRELQENLKTMGRLSLECSLVDIRPTGGSDKWTATACDCLSLYLTGA
IATIILQENSTTWPLPVKIFCRDEKGERVDVSKYLIKKGLALRDRRVSKSSNSHSPEKSL
EIPLEQGDSVVTKCFQINFDTNKKIADKVNEHKVPESKEKYSESRTNGFYKPPAVPNTSS
FEAIVSCIGDDGTIFVVPKLSEFELIKMMDEIQSNLKCLGLLEPYFWKKGEPCAVRGSDT
LWYRGKVMEVVGGTIRVQYLDHGFTEKIPQCHLYPILLYPDTPQFCIPCQLYQTLPVGNV
WQPDAIELLQELLSKREVDIHIMELPDHPWGKLSVHLYFDGMSLSYFMAYHKYCIFEHTE
EIFKEKPRGQNKKYEDENWKIRFEDLLLPEMEAPILPPYLSSLLPPPEELYAVQVKHIVS
PDEVYICLDSVESCTQLNNHGDTDDSGVSWEPESESLEEALQRLNKNVETFPPLTDFSSE
MPCLAEYADGLWYRAKIVSIKEFNPLSVLVLFVDYGSTEKLTINRLRQIPIQLMQYPAQA
IKVLLAGFKPPLSDSGKTRIPYCPRWSMEALWTMIDCLQGKQLYASSVAQAPEQIVTLYE
DEQYPVHMSLVEMGLADKDE
NT seq 4923 nt   +upstreamnt  +downstreamnt
atggcggcagaggcttcgtcgactgggttggcttcctgtcacctagctgggagtaagagt
ggagcgccgggtgcttcagggtgccagtgcactcggtgtggaaggaaggcgtcctttgcc
tctggtcaccaccacgagtatccatgtggtcatgccttttgtgaactgtgcctgttagca
cctcaagaatacaccacgagtaaatgcactgactgtgaggttcgtacaactgtcactatg
aatcaaggtcactacccagtagatggatttattaaagaagattcttctgtggaagcattg
ccacctaaaatggtaaataactgctcttcaggtcttgaaaagacagtggaccagcttatt
atcaatttagaacattcatcctccatacacaggaatgtttcaagcccatcagctgtaatg
tcggagacagaagaaattgatgaagcactgaagatagcaggctgcaattctgaacaatta
agtaatgctataaaaatgcttgatagcacacaagatcaaacaagacaagagacgggcagt
ctaagagaggttgtggagaaacaattcgatacacttattgcttctcttgattccaggaaa
aagagcctgtgtgaagaacttgtaagacgtacagatgattatttatcaaaattagtaaca
gttaaaagctacattgaagagaagaaaagtgacttggatgcagccatgaagatagcaaaa
gaactcaaatcagctccttctctgaggacctactgtgacctgactcagattatccggacc
ttgaagttaaactttgaaagtgaactatcacaagttagttccataattccaaggaaccct
cccaggttgaatataaattgcagtgaggttatctgcatgttcaacagtatgggaaagatt
gaatttgaggactcaacgaaatgtcaccctcaagaaaatgaagttggacagaatgttcaa
aagaaatttaatagtaaaaaggaactgtgttgtgatgtatactcctcactagagaagaaa
agggtagacacggtcgtcctggctgatgaagcccctgtacctcctttgcaagcagagacc
cctgacaggcatttggaaggggaaaacaagcagccacagaaagaggtgctcgtggtggct
tctcctaagactgttgctgtactgcctcaactgggatccagccctgatgtgataattgaa
gaaattattgaggaaaacctagaatcatgcttcacagatgaacctatagagactcctaga
tacccaaaaaagcctcctcagaaagagctgtctgctcctgttgcatcaaaagcaggttgt
ccagagctagtttttgtaagtcatgtcacacatccttgccacttctatgtgcgaaaatat
tcacaaataaaagatgcagccatgttggagaagaagatgaagcaggtgtgcagtaagagc
ttgcacctcgatccctccgacactctggagctgggtgcaagaatatttgtcaacagtatt
aagaatagaatgtggtgtcgaggaattatcactgaaataattccaacaaaaaccaaaaat
gttagaaaaccatgtagtccaaccaaattctcagtctgtgaaatttcactaatacagata
ttcatggtagattttggaaattctgaagtcctgatcatcacgggagttggtgacacacat
gtgggaccagagcatgttggtgagcagcatattacactaagtgacttctgtctgcttgta
aggaagtcggaaccatatagtgaagaactgttgaaagacatcccacatttagcacacctg
tgctccttgaaagacatcgttccatacaattcaagtgagggctgggaaaaggaggcaaaa
gtggaatttttgaaaatggtaaataagaaggctgtgttaatgaaagtttttggagaagaa
gatgatatccttattgtagatctgcagaaaccgccaacaaataaaatcagcagtgatatg
cctgtgtctctcagagatgcattggtttttatggaactagcaaggtttaggtcacaatca
ctgagaagtcacggtgaaaacaatacagctttatgctatcgcccacccgctttgcctgaa
gagatgacagaagtttcagtcatggtttgccatatcaacagccctactgacttctatctt
cagttgatggagaacctggactttttatctcttttaaaaacaattgaggaattctataaa
ggtgaagatggagaaaatctggaaatcctttgtcctcttcagaatcaagcctgtgtagct
aaatttgaagatggaatttggtatcgtgcaaaagtgatcggattgcctggacatcgagaa
gtagaagttaaatatgtggactttggtaatactgcaaaaataacacttaaagatatgcgg
aaaataaaggatgagtttttggaacctccagagaaggcaattaaatgtaaactggcattt
attgaaccaagtaaaagatcacactggtccaaaaaggctaaagaaaaatttgaagaaaag
actcaagataaatttgtgacatgttctgttattaagatcctggaaaacggtgtgctcttg
gttgagcttttcgattcccgagctcctggaacaagcgctgttagcattaatgagcagctt
gtgaaagaaggcctagcatcttatgaagcaggatataccctgaaagataattctaaaaag
catcttgaagtatgggacccttctcctgaagaaatcatttcaagtgaaataaacagctta
agtcctctctctgttaactctctggctaacgagagtttccagtcgttgtacaacaaggag
ctgcctgtgagcatatgtaatgtgctatccccggagaagatttacgtccagtggttgtta
acagagaacctactgacgagtttagaggagaagatggtagctgcttacgagcactccgaa
tggaagcctgtgaagtgggagtgtgatatgcactgcgctgttaagatcccggctaaaagt
cagtggcgaagaggccagatcatcaggatggttacagacacactggtagaggtcttgctg
tatgatgtcggtattgaactagtagtgaatattcactgcttaagagaacttcaagaaaat
ctaaagacaatgggaagattatctctggaatgttcacttgttgatataaggccaactggg
ggaagtgacaagtggacagcaacagcttgtgactgtctttcattatacctcactggagct
atagcaaccataatcttacaggaaaacagcacaacgtggccattgcctgtgaaaattttc
tgcagagatgaaaaaggagaacgtgttgatgtttctaaatatttgattaaaaaaggtttg
gctttgagagatagaagagtgagtaaatcaagtaacagccattcgcctgagaagtctctg
gaaatacccctggagcaaggagattcagtagttactaagtgctttcaaattaactttgat
actaacaagaaaattgctgataaagtcaatgaacacaaagtacccgaatctaaggaaaaa
tattcagaaagcagaaccaacggattctataaaccaccagctgttcctaacacgagttca
tttgaggcaatagtgagctgcattggtgatgatggaactatatttgtagtgcctaaatta
tcagagtttgagctcataaaaatgatggatgaaattcaaagtaatttaaagtgccttggc
cttttggagccatatttctggaaaaagggagaaccctgtgcagtgagaggatctgatact
ttgtggtaccgcggcaaagtcatggaggttgtgggaggcaccatccgggtacagtactta
gaccacgggttcacggagaagatcccacagtgccatctctatcccattctgctgtatccc
gacacaccccagttttgtattccctgtcagctctatcagactttaccggttgggaatgtc
tggcagccagatgccatagagctgcttcaggagctgctttccaagagagaggtggacatt
cacattatggaattacctgaccatccatgggggaagttgtctgtccatctctattttgat
gggatgtcactttcttattttatggcctatcataaatactgtatttttgaacatactgag
gagatatttaaagaaaaaccaagaggtcagaataaaaagtacgaagatgaaaactggaaa
ataagatttgaggacttgcttttgcctgaaatggaggctcccattttaccaccatatctg
tcttcacttctgcctccaccagaggagctttatgcggtgcaagtgaagcatatcgtctca
cctgatgaagtgtatatttgcctggactctgtagaaagctgtactcagcttaacaatcat
ggtgacacggatgacagtggagtcagctgggagccggagtctgagagcctggaggaagca
ctgcagagattgaacaagaatgtggagacctttcctcccctcacggattttagctcagag
atgccttgccttgcagaatatgctgatggtttatggtatagagcaaaaattgtttccatt
aaggaatttaaccctctatctgtcctggtattgtttgttgattatgggtccacagagaag
ttgacaataaacagattacgtcagattcctattcagcttatgcagtacccagcccaagcc
ataaaggtgctcttggcagggtttaaacctcccttgagtgactcaggaaaaacaagaata
ccctactgtcccaggtggagcatggaggcgttgtggactatgatagactgtctccaaggg
aaacaactttatgcttcctctgtggctcaggcaccagaacagatagtgacattatatgaa
gatgaacaatacccagttcacatgtccttggtagaaatggggcttgcagataaagatgaa
tga

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