KEGG   Rattus norvegicus (rat): 306055
Entry
306055            CDS       T01003                                 
Symbol
Pcdh17
Name
(RefSeq) protocadherin-17 precursor
  KO
K16499  protocadherin delta 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    306055 (Pcdh17)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   306055 (Pcdh17)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 PepSY NUC153
Other DBs
NCBI-GeneID: 306055
NCBI-ProteinID: NP_001100749
RGD: 1304753
Ensembl: ENSRNOG00000008970
UniProt: A6HU20 D3ZPN0
Position
15:66631549..66725007
AA seq 1208 aa
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGSGSGRS
KSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIK
VEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLF
ALDVKSRGDGTKFPELVIQKALDRELQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDN
SPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPK
TGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG
ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGSVPFKLEENYDN
FYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYVLQ
VHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSF
NYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRN
AGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVE
LVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIILL
AAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAM
NVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHSSFTGQG
TNSSETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADS
DQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEPEECINCTDECRVLGHSDRCWMPQFPA
ANQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLK
AKRALSPLLQEVPSASSSPTKACIEPCASTKGSLDGCEAKAGALAEASSSYLPTDSQYPS
PSKQPRDPSFMASEQMARVFADVHSRASRDSSEMGAVLEQLDHPNRDLGRESVDAEEVVR
EIDKLLQDCRGNDPVAVRKNNNGFDQTYIRTELMKLKEKGEKKEREREREEIGEKKKEDE
TSYLLTIC
NT seq 3627 nt   +upstreamnt  +downstreamnt
atgtacctttccatctgttgctgctttcttttgtgggcccctgccctgacactcaaaaac
ctcaactattcagtaccagaggagcaaggggccggcacggtgataggcaacatcggcaag
gatgcccgactgcagcccgggcttccgcccgctgagcgcggcagcggcagcgggaggagc
aagtccggcagctaccgggtgctggagaactccgcaccacatctgctggacgtggatgct
gacagcgggctcctctacaccaaacagcgaatcgaccgtgagtccttatgccgccacaat
gccaagtgccagctctccctagaggtgttcgctaacgacaaggagatttgcatgatcaag
gtagagatccaggacatcaacgacaacgctccctcttttccctcagatcagatagaaatg
gacatctccgagaacgcggcacccggcacccgcttcccccttacgagcgctcacgaccca
gacgctggcgagaacgggctccgcacctatctgctcacccgcgatgatcatggcctcttt
gcactggacgtcaagtcccgcggcgacggcaccaagttcccagagctagtcatccaaaag
gcgttggaccgcgagctgcagaaccaccacactctggtgctgacagccctggatggcggg
gagcctccacgctccgctacggtgcagatcaatgtgaaggtgatcgattccaatgacaac
agtccagtcttcgaggctccatcgtacttggtggaactgcccgagaacgctccactgggt
acggtggtcattgatctgaacgccaccgatgctgatgaaggacccaacggagaagtcctc
tactcctttagtagctatgtgcctgaccgcgtgcgggagctcttctccatcgatcctaaa
actggcctgatccgcgttaagggcaacctggactatgaggagaacggcatgttagagatc
gacgtgcaggccagagacctaggacctaacccaattccagcccattgcaaggtcacagtc
aagctcatcgaccgcaacgataacgcgccgtccattggtttcgtctccgtgcgccagggg
gcgctgagtgaggccgccccgcctggcacagtcatcgccctagttcgggtcactgaccga
gactcaggcaagaatgggcagcttcagtgtcgagttctaggtggaggagggactgggggt
ggaggtggcctgggaggtcctggttccgtccccttcaagctggaagaaaactatgacaac
ttctacaccgtggtgactgaccgtccgctggaccgtgagacacaagacgagtacaatgtg
acaatagtggcccgggacggcggctcccctccactcaactccaccaagtccttcgctgtc
aagattctggatgagaatgacaacccgcctcgtttcaccaaaggactgtacgtgctccaa
gtacatgagaacaatattccaggagaatacctcgggtcagtgctcgcccaggatcccgac
ctaggccaaaatgggacagtgtcatactccattctcccctcacacatcggtgacgtgtcc
atctacacctatgtgtccgtgaaccccactaacggggccatatatgccctgcgctccttt
aactatgaacagacgaaggcttttgaattcaaggtgctggctaaggactcgggggcgccc
gcgcatttggagagcaacgccacggtgagggtgacagtgttagacgtgaatgacaacgct
ccagtgattgtgcttcccactctacagaacgacaccgctgaactgcaggtcccgcgcaat
gctggcctggggtacctggtaagcacagttcgagccctggacagcgactttggagagagc
gggcgcctcacctatgagattgtggatggcaatgatgaccacctgtttgagatcgatccg
tccagcggcgagatccgcacgctgcaccccttctgggaggatgtgaccccggtggtggag
cttgtggtgaaggtgaccgatcatggcaagcccaccctgtccgccgtggccaaacttatc
attcgctccgtgagtggttccctgcctgaaggggtaccgcgagtgaatggtgagcagcat
cactgggacatgtcgctgcctctcatagtgacactaagcacgatttcgatcatcctccta
gcggccatgatcaccatcgctgtcaaatgtaaacgggaaaacaaggagattcgcacttac
aactgccgcatcgccgagtacagccacccacaactaggcggggggaagggcaagaagaag
aaaatcaacaaaaacgatatcatgctggtgcagagcgaggtggaagagaggaacgccatg
aacgtcatgaacgtggtgagcagtccctccctggccacctcccctatgtacttcgactac
caaacccgcctgcccctcagctcgccccggtcagaggtgatgtatcttaagccagcctcc
aacaacctgactgtcccgcaggggcacgcaggctgccacagcagcttcaccggacaaggg
accaattcgagcgagacccctgccactcggatgtccataattcagacagacaattttccc
gcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgtttaaa
gacccagaaagagccagcctgagagacagtgggcacggggacagcgatcaggcggacagt
gaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatg
aaaactacttcaactaaaagtcaaccacttgaacaagaaccggaagagtgtattaattgc
acagatgaatgccgagtgcttggtcattctgatagatgttggatgccacagttccctgca
gccaatcaggctgaaaatgcagattaccgcacaaatctctttgtacccacagttgaagct
aacgttgagactgagacttacgaaactgtgaatcccactgggaaaaagactttttgtaca
tttggaaaagacaagcgagagcacactattctcattgccaatgtgaaaccttatttaaaa
gccaaacgtgccctgagccctctcctccaagaggtcccctcagcatctagcagcccaacc
aaggcatgcattgagccttgcgcctcaacaaaaggctccctggatggctgtgaagcaaaa
gcaggggccttagcagaagcaagcagctcctacctgcccactgacagtcagtatccgtca
cccagtaagcaaccaagagacccttccttcatggcttctgagcagatggcaagggtcttt
gcggatgtgcactccagagctagtagggattccagcgagatgggagctgtgctggaacag
ttggatcaccccaacagagatctgggcagagagtccgtggatgcggaggaagttgtgaga
gagattgataagctcttgcaggactgccggggaaatgaccctgtggctgtgagaaaaaat
aacaatggttttgaccaaacttatattaggacagaattaatgaagcttaaggagaaagga
gaaaagaaagagagagagagagagagagaagaaattggagagaagaaaaaggaggatgag
acaagttaccttttgacaatctgttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (14)   
   UniProt (2)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system