KEGG   Rattus norvegicus (rat): 306347
Entry
306347            CDS       T01003                                 
Symbol
Ell
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    306347 (Ell)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    306347 (Ell)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    306347 (Ell)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     306347 (Ell)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     306347 (Ell)
    Little elongation complex (LEC)
     306347 (Ell)
SSDB
Motif
Pfam: ELL Occludin_ELL DUF3450 Taxilin DUF6185 GAS Uds1
Other DBs
NCBI-GeneID: 306347
NCBI-ProteinID: NP_001100774
RGD: 1311121
Ensembl: ENSRNOG00000019824
UniProt: D4A753 A6KA28
Position
16:complement(18877751..18925449)
AA seq 604 aa
MAALKEARSYGLSCGRVSDGSRVSVFHVKLTDSALKAFESYRAHQDSVSLRPSIRFEGSQ
GHISIPQPDCPEEVRAFSFYLSNIGRDSPQGSFDCIQQYVSSHGDVHLDCLGSIQDKVTV
CATDDSYQKARQSMAQAEEETRSRSAIVIKAGGRYMGKKVQFRKPAPGAADAVPSRKRAT
PINLASAIRKSSGGGASSVVQRPFRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDTLD
SLLQQVASVNPKDGTCTLQDCMYKNVQKDWPGYSEGDQQLLKRVLMRKLCQPQSATTDSS
PPREHRGSASPSQKRSQQTDFIDPLASKKPRISHFTQRAQPILNGRLGAPNGHETLLPAP
VPTPSDTLSSSHLPPRLEPPRTHDPLADVSNDLGHSTQDYKHQEATPAPASRLGLPLLTD
FPQAEQPASSSHVHSRPKKKSKKHKDKERPPEERPPAPQPDSSTAPALPTDAPGLNGDCA
SVPTSTSETPDYLLKYPAISSSEQRQSYKNDFNAEYSEYRSLHARIEQITRRFTQLDAQL
RQLSQGSEEYETTRGQILQEYRKIKKTNTNYSREKRRCEYLHRKLAHIKRLIAEYDQRQL
QAWP
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaggaggctcggagttacgggttgtcgtgtgggcgcgtgagcgacggc
agcagggtgtcggtattccacgtgaagctcaccgacagtgctctgaaggctttcgagagc
taccgggcccaccaggactctgtgtctctgagaccatccatccgatttgaaggaagccaa
ggacacatctccataccccagcccgactgccccgaggaggtgcgggccttctccttctac
ctctccaatattggccgtgacagccctcagggcagctttgattgcatccaacaatatgta
tccagccatggggatgtacacctggactgcctgggcagcatccaggacaaggttacagta
tgcgccactgatgactcctaccagaaggcacgacagagcatggcacaggcagaagaggag
actcggagccgaagcgccatcgtcattaaagctggaggcagatacatggggaaaaaggtt
cagtttcggaagccagcgccaggggcagctgatgcagtgccctcccggaaacgtgccacc
cccattaacctggcaagtgccatcagaaagagcagtgggggtggagccagcagtgtggta
cagaggcccttccgagatcgggtgctgcacctcctggccctgaggccctacaggaaggct
gagctgctgctgcggttgcagaaggatgggctgacacaggcagacaaggacaccctggac
agcctgctgcagcaggtggccagtgtgaaccccaaggacggcacgtgcacactgcaggac
tgcatgtacaaaaacgtgcagaaggactggcccggctactctgagggtgaccagcagctg
ctgaagcgtgtgctcatgcggaagctgtgtcagccacagagtgccaccacagactccagc
ccgcccagggagcacaggggttccgcctcaccttctcagaaacggtcacagcagacagac
ttcattgatcccctggccagcaagaagccccggatctcacatttcacacagcgagcacaa
cccatcctcaatggaagactgggtgcccccaatggccatgagactctgctgcccgctcca
gtacccaccccatcagacaccctcagctctagccatctgcccccacggctggagccgcca
cggacccacgaccccctggctgatgtcagtaatgacctgggccacagtacccaggactat
aagcaccaggaggccaccccagctccagcctcccgcctcggtcttcccctgctgacggac
tttcctcaggctgaacaacctgctagctcctcacatgtccatagccgacccaagaagaag
tccaagaagcacaaagacaaggagcggccccctgaagaaaggccccccgccccacagcct
gactcatccactgcccctgcactgcccacagatgccccaggtctgaatggagactgtgcc
agtgtccccacatccacatcagagactccggactacttgctgaaatacccagccatctcg
tcatcagagcagcgtcagagctacaagaatgacttcaatgctgaatacagcgagtaccgc
agtctgcatgctcggatcgagcagatcactcgcaggttcacacagctcgatgcacagctc
agacagctgagccagggctctgaggaatacgagacaacccgcggacagattcttcaggaa
tataggaaaatcaaaaagaccaacaccaactacagccgagagaagcggcgctgtgagtac
ctgcaccgcaagctggcgcacattaagaggctcatcgcagagtatgaccagcggcagctc
caggcctggccctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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