KEGG   Rattus norvegicus (rat): 306356
Entry
306356            CDS       T01003                                 
Symbol
Cilp2
Name
(RefSeq) cartilage intermediate layer protein 2 precursor
  KO
K24436  cartilage intermediate layer protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    306356 (Cilp2)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Thrombospondin domain-containing proteins
  Other thrombospondin domain-containing proteins
   306356 (Cilp2)
SSDB
Motif
Pfam: Mucin2_WxxW Ig_3 CarboxypepD_reg I-set CarbopepD_reg_2 Ig_2 TSP_1 ig TSP1_spondin V-set TSP1_ADAMTS
Other DBs
NCBI-GeneID: 306356
NCBI-ProteinID: NP_001100777
RGD: 1311157
Ensembl: ENSRNOG00000020622
UniProt: D3ZE05 A6KAA7
Position
16:19573821..19581100
AA seq 1188 aa
MSSPLPLLYLCIAAAHLAGARDATPTEEHTATVRGLQGRPPDPGQPSPALEDWEEASEWT
SWFNVDHPGGDGDFESLAAIRFYYGPARVCPRPLALEARTTDWALPAAIGERVHANPERG
FWCLNREQPRGRRCSNYHVRFRCPLDPPYLPPCSAEAAWGAWGAWGLCSKSCGPGRRLRR
RSCQSSSGDTCPGSPQEAQKCVRSRCPAPPKSSLCPCCSHVPLGCSSDTCGCPNHILLGS
VVTPSGRPLSGARVSLRTRPGTVATSDTHGTFRVPGVCAGSKANVSARMNGFSTGTAQAH
ANTSNSAVVTIVLEELGKPYLVKHPESRVREAGQNVTFCCKASGTPMPKKYSWFHNGTLL
DRRQQGSGPHLELQGLREEQAGEYHCKAWNEAGTVRSRAAHLTVLAPGQPACDPRPQEHL
IKLPDDCGQPGGGPTYLDVGLCADTRCPGPVGSGPRCGDAGSRCCSVLRLESRDIRCSGY
VLPVKVVAECGCRKCLPRRGLVRGRVVAADSGEPLRFARILLGLAPIGFTSYQGDFTIEV
PPATERLVVTFVDSSGEFVDSIRVLPFDPRGAGVYHEIRVLRKAAAVLLDAEQGGEIPLG
GTEEAPALGELVFPPRTFHHPDGRPYSGPVEARVTFVDPRDLASAAAASSDLRYLDSSGE
LAPLRTYGMFAVDLHAPGSTEQLHVARADVRVDADHVRMPGHADALALWSLDPETGLWEE
EGAEQGGGGFRREKEAVRVRREERTFLVGALTVRERRLFNLDVPERRRCFVKVRAYGTDR
FAPSEQVQGVVVTLLNLEPAPGFTANPRAWGRFDSAVTGPNGACVPAFCDAERPDAYTAF
VTASLGGEELEAAPSRPRATAATVGVAEPYLERLGYQRTDHDDPALKRTGFRLNLARPRT
GHESEAHGPVYPWRRLRDCEDAPVTDSHFRFSRVEADKYEYDVVPFHEGAPASWTGDLLA
WWPNPQEFRACFLKVRLQGPQEYMVRSHNAGGTHEDTRGHLYGLRDTRSVRNPERPGASA
ACVEFKCGGMLFDQRQVDRTLVTVTPQGSCRRVAVNTLLQDYLARHPPLAPADDPATFAM
LAPLDALGHNYGVYTVTDQSPRLAKEIAIGRCFDGSSDGFSREMKADAGTAVTFQCREPP
ARPSLFQRLLENPASALGDIRREMGQAARDSRVTQTQAGDTGPFGSGQ
NT seq 3567 nt   +upstreamnt  +downstreamnt
atgtcgtcacctctgcccttgctctatctctgcatcgctgccgcacacctagcgggagcg
cgagatgccacccccaccgaggagcacactgcaaccgtcaggggtcttcagggacggcca
ccagaccccggccagccctcgccggccctggaggactgggaggaggccagcgagtggacc
tcgtggttcaacgtggaccacccgggaggagatggtgacttcgagagcctggcagccatt
cgcttctactatggtcccgcgcgcgtgtgcccgaggccgctggcactggaggcgcgcacc
acggactgggcactacccgctgcaataggcgagagggtgcacgccaacccagagcgcgga
ttctggtgtcttaatcgcgagcagccgcgaggccgccgctgctccaactaccacgtgcgc
ttccgctgcccactggatccaccttatctccctccttgctctgcagaggcggcatggggc
gcttggggcgcttggggcctctgttccaagagttgcgggccaggccgtcgcctgcgccgt
cgcagctgtcaaagctcatctggggacacatgtcctgggagcccccaggaggcacagaag
tgcgtgagatcccgttgcccagctccccccaagagttctctctgcccctgctgctcccat
gttcccctaggatgtagctctgacacctgcgggtgccccaaccacatcctcttgggctcg
gtggtcaccccatctgggcgaccgctgtcaggagccagggtctccctgcgaacacgacct
ggcaccgtagccaccagtgacacccatggaaccttccgggtgcctggagtctgcgctggc
agcaaggccaacgtcagtgcccggatgaatggcttctctactggtacagcccaggcccat
gccaacacctccaactctgctgtggtcaccatcgtccttgaagagttagggaagccgtac
ctggtaaagcaccctgagtctcgagttcgagaggcaggtcagaatgtgaccttctgctgc
aaggcctctgggacacccatgcccaagaaatattcctggttccacaacgggaccttactg
gaccgacgccagcaggggtctgggccacacctagagctccaggggcttcgtgaggagcag
gcaggggagtaccactgcaaagcctggaacgaggcgggcaccgtgcgatcccgcgctgcc
cacctcacggtgctcgctcccggccagccagcctgtgacccccgacctcaggaacacctg
atcaagcttccggatgactgcggccagccgggtggcggccccacgtacctagacgtggga
ctgtgcgcagacacgcgctgcccgggccccgtgggctccggcccgcgctgtggggacgcg
ggctctcgctgctgctcagtgctgcgcctggagagcagagatatccgctgctctggctat
gtgctcccagtgaaggtggtggctgagtgtggctgtcgcaagtgcctgccccgtagggga
ttggtgcgaggccgcgtggtggctgcggactctggggagcccctgcgtttcgccaggatt
ctattgggccttgcacccatcggcttcacctcctaccagggcgacttcaccatcgaggtg
ccgccggccaccgagcgcctcgtggtgaccttcgtggactcgagtggtgagttcgtggac
agcatccgcgtgttgcctttcgaccctcgcggcgctggtgtgtaccacgagatccgcgtg
ctgcgcaaggcggccgcagtgctgctggacgcggagcagggcggtgaaattccgctgggc
ggcacagaggaggcgccagcgctaggcgagctagtcttcccgccccggaccttccaccac
cccgacggccgtccctactcggggcccgtggaggcgcgtgtcaccttcgtggaccctcgt
gacctggcgtcggcggccgcggcgtccagcgacctgcgctacctggatagctcgggtgag
ctggcgccgctgcgcacctatggcatgtttgcagtggacctgcacgcgccaggctccacc
gagcagctgcacgtggcgcgcgcggacgtgcgcgtggacgccgaccacgtgcgcatgccc
ggacacgccgatgctctggcactctggtcgttggacccagagaccggcctgtgggaggag
gagggggctgagcagggaggaggcggcttccggcgtgagaaggaggcggtgcgcgtgcgc
agggaggagcgcacgttcctcgtgggcgcgctcacggtgcgcgagcgccgcttattcaac
ctagacgtgcccgagcggcgccgctgcttcgtgaaggttcgcgcctacggtacagatcgc
ttcgcgccctcagagcaggtgcagggcgtggtggtgacgctgctcaatctggaacccgcg
cccggtttcacggccaacccacgcgcgtggggccgcttcgacagcgcggtcacagggccc
aacggcgcgtgcgtgccggccttctgcgacgccgagcggcccgacgcctacacggccttc
gtgaccgcgtctctaggaggcgaggagctggaggccgcgccgtcgcggccacgcgcgacc
gcggccaccgtgggcgtggcagagccctacctggagcgcctcggctaccagcgcaccgat
cacgacgaccccgcgctcaagcgcaccggcttccgcttgaaccttgcacgtccacgcacg
ggccacgagtccgaggcgcacgggcccgtgtatccgtggcgccgcctgcgcgactgcgag
gacgcgccggtcaccgacagtcacttccgattctcgcgcgtagaggcagacaagtacgag
tacgacgtggtgccattccacgagggagcgcccgcctcgtggacaggcgacctgctggcc
tggtggcccaacccgcaggagttccgagcgtgcttcctgaaggtgcggctgcagggcccc
caggagtacatggtgcgttcgcacaacgcgggcggcacccacgaagacacgcgcggccac
ctctatgggctgcgcgacactcgcagcgtgcgcaaccctgagcgcccgggcgcctcggcc
gcctgcgtggagtttaagtgcggtggcatgctgtttgaccagcgccaagtggacaggaca
ctggtgactgtgaccccgcagggcagctgccgccgcgtggccgtcaacacgctcctgcag
gactatctagcccggcacccgccgctcgcccccgcggacgaccccgccaccttcgccatg
ctggctccgcttgacgccctgggccacaactatggtgtctacaccgtcaccgaccagagc
ccacggctggccaaggaaatcgccatcggccgctgcttcgacggctcctcggacggcttc
tcccgggagatgaaggcggacgcgggcacagcggttaccttccagtgccgagagccgccc
gccagacccagcctcttccagaggctgctggagaaccccgcatcggcgcttggcgacatt
cgtagggagatgggccaagccgcccgcgattcccgggttacccaaacccaggctggggac
accggccccttcggttctggacagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (79)   
   KEGG ORTHOLOGY (1)   
   RefGene (73)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (99)   

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