KEGG   Rattus norvegicus (rat): 306375
Entry
306375            CDS       T01003                                 
Symbol
Csgalnact1
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
  KO
K00746  chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:2.4.1.174 2.4.1.175]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rno01100  Metabolic pathways
Module
rno_M00058  Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
    306375 (Csgalnact1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:rno01003]
    306375 (Csgalnact1)
Enzymes [BR:rno01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.174  glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
     306375 (Csgalnact1)
    2.4.1.175  glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
     306375 (Csgalnact1)
Glycosyltransferases [BR:rno01003]
 Glycan extension
  O-Glycan
   306375 (Csgalnact1)
SSDB
Motif
Pfam: CHGN Glyco_transf_7C Glyco_tranf_2_2 DUF4407 Tropomyosin
Other DBs
NCBI-GeneID: 306375
NCBI-ProteinID: NP_001100779
RGD: 1307618
Ensembl: ENSRNOG00000013024
UniProt: F7FDK7 B5DEY9
Position
16:25761946..26097306
AA seq 530 aa
MVRRGLVGWISRVVILLVLLCCAISVLYMLACTPKGDQEQLGLPRANGPTGKDGYQAVLQ
EREEQHRNYVNSLKRQIAQLKDELQARSEQLRSGQDQASDATSLRSGWDPEPKAQADILA
FLRGQVDKAEVHAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELVE
AIESALESLNSPVESSPHQRPYTAADFIEGIYRTERDKGTLYELTFKGDHKHEFQRLVLF
RPFGPIMKVKKEKLNMANTLINVIVPLARRVDKFRHFMQNFREMCIQQDGRVHLTVVYFG
KEEMNEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVVLFFCDVDIY
FTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPALEQQLVIKKETGFWRDFG
FGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVIRTPVRGLFHLWHEKHCM
DELTPEQYRMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQKLKASSKKT
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggtccgacgcgggctggtggggtggatttcccgggtagtgattctgctggtgctgctc
tgttgtgccatctctgttctctacatgttagcctgcaccccaaaaggcgaccaagagcag
ctgggactgccacgggccaacggccccacaggcaaagatggctaccaagcggtgctacag
gagcgtgaggaacagcatcgcaactatgtgaatagtcttaagcgacagatcgcgcagctc
aaggatgaactgcaggcacgcagtgagcagctccgcagtgggcaggaccaggccagcgat
gccaccagcctgcggtcaggctgggaccctgaacccaaagcccaggctgatatactggcc
ttcctgcgtgggcaggtggacaaggctgaggtccacgccggtgtcaagctggccaccgaa
tatgctgctgtgccttttgatagcttcactctgcagaaagtataccagctggagactggt
ctgacccgccaccctgaggagaaaccagtgaggaaggacaagcgagatgagctagtggaa
gctatcgaatcagccctggagagtctaaacagccctgtggaaagcagcccacaccagcgc
ccttacacggctgcagacttcatagaagggatctaccgaacagaaagggataaaggcact
ttgtatgagctgaccttcaaaggggaccataagcatgaattccaacgacttgtcctattt
cgaccttttggccccatcatgaaagtgaagaaggaaaagctcaacatggccaacacactt
atcaacgttatcgtgcccctagcgaggagggtggacaagttccggcacttcatgcagaac
ttcagggagatgtgcatccaacaagatgggagagttcatcttaccgttgtttattttggg
aaagaagaaatgaatgaagtcaaaggaatacttgaaaacacttccaaggctgccaatttt
agaaacttcaccttcatccagctgaatggagagttctcccggggaaagggactggatgtt
ggagcccgcttctggaagggaagtaatgtcgtgctctttttctgtgatgtggacatctac
ttcacctctgagttcctcaacacatgtaggctgaacacacagccagggaagaaggtattt
tatccggttcttttcagtcagtataaccctggcataatctacggccatcatgatgctgtc
cctgccctagaacagcagctggtcataaagaaggaaacaggattttggagggactttgga
ttcggaatgacttgtcagtaccggtcagacttcatcaacataggtggatttgacctggac
atcaaaggctggggcggtgaagatgtgcacctgtaccggaaatatctccatagcaacctc
atagtgatacgcacgcctgtacggggacttttccacctttggcatgagaagcactgtatg
gatgaactgacccctgagcagtacaggatgtgcatgcaatcaaaggctatgaatgaagca
tcccacgggcagctgggaatgcttgtcttccggcatgaaatagaggctcaccttcgcaaa
cagaagctcaaagccagcagtaaaaagacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (3)   
   KEGG ENZYME (2)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (2)   
   RefSeq(pep) (10)   
DNA sequence (12)   
   RefSeq(nuc) (10)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system