KEGG   Rattus norvegicus (rat): 306417
Entry
306417            CDS       T01003                                 
Symbol
Sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    306417 (Sh3rf1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    306417 (Sh3rf1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     306417 (Sh3rf1)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     306417 (Sh3rf1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    306417 (Sh3rf1)
SSDB
Motif
Pfam: SH3_1 SH3_9 SH3_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-RING_4 zf-RING_11 zf-Nse zf-MIZ
Other DBs
NCBI-GeneID: 306417
NCBI-ProteinID: NP_942059
RGD: 735154
Ensembl: ENSRNOG00000010358
UniProt: Q71F54
Position
16:complement(33746396..33912127)
AA seq 894 aa
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGV
DELPSNILLVRLLDGIKQRPWKPGPGGGGSTTCTNVLRAQGSTVVNCGSKDLQSPQCGQQ
PRVQAWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGVH
GFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEG
MLADKIGIFPISYVEFNSAAKQLIEWDKPPVPGVDTAECPSATAAQSSSASKHSDTKKNT
RKRHSFTSLTMANKSSQASQNRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQVHI
STTGLIVTPPPSSPVTTGPSFTFPTDVPYQAALGTMNPPLPPPPLLATTVLASTPSGATA
AAVAAAAAAVAAGVGPRPAVGSTEQIAHLRPQTRPSVYVAIYPYTPRKEDELELRKGEMF
LVFERCQDGWYKGTSMHTSKIGVFPGNYVAPVTRAVTNASQAKVPMSTAGQASRGVTMVS
PSTAGGPAQKPQGNGVAGNPSVVPTAVVSAAHIQTSPQAKVLLHMTGQMTVNQARNAVRT
VAAHNQERPTAAVTPIQVQNAACIGPASVGLPHHSLASQPLPPMVGPAAHIAAVNINRTS
VPLACAAGASSLASPNMTTAALETEPSGRTVTILPGLPTSPESAASACGNSSAVKPDKDS
KKEKKGLLKLLSGASTKRKPRVSPPASPTLDVELGSGEVPLQGAVGPELPLGGVHGRVGS
CPTDGDGPVAAGTAALAQDAFHRKTSSLDSAVPIAPPPRQACSSLGPVMNEARPVVCERH
RVVVSYPPQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
NT seq 2685 nt   +upstreamnt  +downstreamnt
atggatgagtctgccttgttggaccttctggagtgccctgtgtgtctagaacgcttggat
gcttccgcaaaggtcttaccctgccagcacacgttttgcaaacgatgtttgctggggatt
gtgggttcccggaatgaactcagatgtcccgaatgccggactcttgttggctctggggtt
gacgagctccccagtaacatcctactggtcagacttctggatggcatcaagcagaggcct
tggaaacccggccctggtgggggcggctcgaccacctgcacaaatgtattaagggcgcag
ggcagcactgtggttaattgtggctcaaaagatctgcagagcccccagtgtggacagcaa
cctcgggtgcaagcctggagccccccagtgaggggaatacctcagttaccgtgtgccaaa
gcattatataactacgaaggaaaagagcccggagaccttaagttcagcaaaggcgacatc
atcattttgcgacgacaagtggatgaaaattggtaccatggagaagtcaacggggtccac
ggctttttccccaccaactttgtgcagatcatcaaacctttacctcagcccccacctcag
tgcaaagcactttatgactttgaagtgaaagacaaggaagctgacaaagattgccttccc
tttgcaaaggatgacgtactgactgtgatccgcagagtggatgaaaactgggctgaagga
atgctggcagataaaatagggatatttccaatttcatatgttgagtttaactcagctgcc
aagcagctgatagagtgggataagcctccggtaccaggagtggacactgcagaatgccct
tcagcgacagcggcgcagagcagctctgcctcaaagcactccgataccaagaagaacacc
aggaagcgacactccttcacctccctcaccatggccaacaagtcttcccaggcgtcccag
aaccgccactccatggagatcagccctcctgtgcttatcagctccagcaaccccacggcc
gcagcccgcatcagcgagctctccgggctctcctgcagcgccccgtctcaggttcatata
agcaccactgggttaattgtgaccccaccccctagcagcccagtgacaactggcccttcg
ttcacgttcccaaccgacgtcccctaccaagctgcccttggaacgatgaatcctcctctc
cccccaccccctctcctggccaccactgtactcgcctctacaccgtcaggcgctactgct
gctgccgttgctgctgctgctgctgctgttgctgctggagtgggacccaggcctgcagtg
ggatccacggaacagatcgcacatttacggccgcagacccgtcccagtgtatatgttgct
atatatccatacactccccggaaggaagacgaactggagctgaggaaaggcgagatgttt
ttggtcttcgagcgttgccaggacggctggtacaaaggaacgtcaatgcacaccagcaag
atcggcgttttccccggcaactatgtggcacccgtcacaagggcggtgacaaatgcctcc
caagctaaagtccctatgtctacagcgggtcaggcaagtcgtggggtgactatggtcagt
ccttccaccgcaggagggcctgcacagaagccccaaggaaatggcgtggctgggaatccc
agcgtcgtccccacagctgtggtgtcagcagctcatatccagacaagtccccaggctaag
gtcctgctgcacatgactgggcagatgacagtcaaccaggcccgaaatgctgtgaggaca
gttgcagcacataaccaggagcgccccacagcagcagtgactcccatccaggtccagaat
gcagcctgcatcggtcctgcatctgtaggcctgccccatcattctctggcctcccaacct
ctgcctccaatggtaggtcctgctgcccacattgctgccgtcaacatcaatcgaaccagt
gtccccctggcctgcgctgcaggggcatcctctctggcctccccaaacatgaccactgct
gctttggagacggagcccagtggtcggacagtgaccatcctccctggactccccacatct
cctgagagtgctgcatcggcctgtgggaacagttcagctgtgaaaccagacaaggacagt
aagaaagaaaaaaagggcctattgaagctgctttctggcgcctccaccaaacgcaagccc
cgagtctcccctccagcatcacctaccctggacgtggagctgggttcaggggaggttccc
ttgcagggagcagtgggtcctgagttgccgctagggggcgtccatggcagagtggggtcc
tgccccaccgatggggatggtccagtggccgcagggacagcagccttagcccaggatgcc
ttccatcgcaagacaagctccctggactccgcagtgcccatcgctccaccacctcgccag
gcctgctcctccctgggtccagtaatgaatgaggccaggcctgttgtttgtgaaaggcac
agagtggtggtttcctatcctcctcagagtgaggcagaacttgaactgaaagaaggagat
attgtgtttgttcataagaaacgagaggacggctggttcaaaggcacgttacaaagaaac
gggaagactggtcttttcccagggagctttgtggagaacatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (32)   

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