KEGG   Rattus norvegicus (rat): 306471
Entry
306471            CDS       T01003                                 
Symbol
Snx25
Name
(RefSeq) sorting nexin-25 isoform X2
  KO
K17887  sorting nexin-25
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:rno03029]
    306471 (Snx25)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    306471 (Snx25)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Morphogenesis factors
    306471 (Snx25)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   306471 (Snx25)
SSDB
Motif
Pfam: Nexin_C PXA RGS PX Isy1
Other DBs
NCBI-GeneID: 306471
NCBI-ProteinID: XP_006253230
RGD: 1310150
Ensembl: ENSRNOG00000011116
Position
16:52867102..52971028
AA seq 932 aa
MHRDATDSSGARRGPTSAADACRAARGSADGQRTADRPGGGWRGPAAVAALAVLALCCLV
PGWGPAAGTGPGAVLLRLSLYLSCAAAALLLGTLVALVCWSPRAQPPDFASSWSRLAAAV
RCPLRSPVYGNPQETAQGRRVVISHNMDRALKDVFDYSYRDYILSWYGNLSRDDGQLYHL
LLDDFWDIAKQIRYRLSHVDVVKVVCNDIVKALLTHFCDLKAATARHEEQPRPFVLHACL
KDSHDEVRFLQTCSQVLVFCLLPSKDIQSLSLRTMLAEILTTKVLKPVVELLSNPDYINQ
MLLAQLEYREQMSGHHKRAYTYAPSYEEFIKLINSNSDVEFLKQLRYQIVVEIIQATTIS
SFPQLKRHKGKESAAMKTDLLRARNMKRYINQLTVAKKQCEKRIRILGGPAYDQQEDGVS
DEGEGPQSQKILQFEDIMTNPFYRERFGTYMERIDKRALVGFWESVEHLKNANKNEIPQL
VSEMYQNFFVESKEIPVEKSLYKEIQQCLVGNKGIEVFSKIQGDVYDVLRDRYYPSFLVS
DLYEKLIHEEEEETPDSQLASGKDELIISKLKDEILVIEKECTDLQLHMARTDWWCEHLG
LWKASITSAEVTEENGEQMPCYFVRVNLQEVGGVETKNWTVPRRLSEFQNLHRKLSECVP
SLKKVQLPSLSKLPFKSIDHKFLEKSKNQLNKFLQNLLSDERLFQSEALYAFLSPSPDYL
KVIDVQGKKTSFSLSSFLEKLPRDFFSHQEEEIEEDSDLSDYGDDVDGKKDALAEPCFML
IGEIFELRGMFKWVRRTLIALVQVTFGRTINKQIRDTVNWIFSEQMVVYYISAFRDAFWP
NGKLAPPTRIRSEAQSQETKQRAQQKLLENIPDTLQSLVGQQNARHGIIKIFKALQETRA
NKHLLYVLMELLLTELCPELRAHLDQLKAGQV
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgcaccgcgatgccaccgacagcagcggcgcccgccgcggccccacgtccgccgcagac
gcctgccgcgctgcccggggctccgcggacggacagcggacggcggaccgcccgggcggg
ggctggcgggggcccgcagccgtggcggccctggccgtgctggcgctgtgctgcctggtc
ccgggctggggaccggcggcgggcacggggccgggcgcggtactgctgcgcctcagcctg
tacctgagctgcgccgcggccgccttgctgctggggacactggtcgcgctcgtctgctgg
agcccgcgcgcccagccgccggacttcgcctcttcctggagccggctggcggcggccgtc
cgctgtccgctgcggagccctgtgtatggaaatccacaggagacagctcagggcagaaga
gtggtcatttctcacaatatggatcgagctctgaaagacgtgttcgactacagttacaga
gactacattctctcctggtacggcaacctcagcagagatgatgggcagctctaccatttg
ctcttggatgacttctgggatattgccaagcagattcgctacaggctgagtcacgtggat
gtggttaaagttgtctgtaatgatattgtaaaggctttgctcactcacttctgtgacctg
aaagctgctactgccagacatgaagaacagccaaggccttttgtgttgcatgcatgcttg
aaggactcacacgatgaagtaagattccttcaaacgtgttctcaggttctggtgttttgc
cttctcccttcgaaggatatccagtctctcagcttacgtacaatgctcgcagagattctc
acaacaaaagtcttgaagccggtggtggaattgctgagtaaccctgattacattaaccag
atgcttctggcgcagttggagtatagggagcagatgagtggacatcacaagagagcctac
acgtacgctccttcttacgaggagttcatcaagctcatcaacagcaactctgacgtggag
ttcctgaagcagctcaggtatcaaattgtagtggaaataatccaagcaactacaattagc
agctttccccagctgaagaggcacaagggtaaggaatctgctgccatgaaaactgatctc
ttgcgggccaggaacatgaaaaggtacattaaccagctgactgtggcaaagaagcagtgt
gagaagagaatccgaatcctgggaggtcctgcctatgaccagcaagaggacggggtctcg
gatgaaggggaagggcctcagagccaaaagattcttcagtttgaagatattatgaccaat
cctttctaccgagagcgctttggaacatacatggaacggatcgacaagcgggctttggtt
ggcttttgggagtctgtggaacacctgaagaatgctaacaagaatgaaattccacaatta
gtgagtgaaatgtatcagaatttttttgtggaaagcaaggaaattcctgtggaaaagtca
ctttacaaagaaatccagcagtgcctcgtgggaaacaagggtatcgaggtgttcagcaaa
atccaaggagatgtgtacgatgtactgagggataggtattacccctccttccttgtcagc
gacctgtatgagaagctcatacatgaggaggaggaagagacacctgactctcagcttgcc
tcggggaaggatgaactgattatttccaagctgaaggacgaaatacttgtgatagagaaa
gagtgcacagatcttcagctgcacatggcgagaacagattggtggtgtgagcacctgggc
ctgtggaaagcctccatcaccagcgcagaggtgacagaagagaatggtgagcaaatgcct
tgttattttgtcagggtaaatctacaagaagttggaggagttgaaactaaaaactggact
gtaccaagaaggctcagtgagtttcagaatttacatcggaaacttagtgagtgtgtccct
tctttaaaaaaagtccagttgccttctctcagtaagctgcctttcaaatctatagatcac
aagttcctggaaaagtcaaaaaatcagttaaataagtttttacagaacctgctttcagat
gaaagactgtttcagagtgaagcactttatgcctttttgagcccttctcctgactacctc
aaggtcattgatgtgcaggggaaaaaaacctccttctcattatcttcattcttggaaaaa
cttcctcgtgatttcttctcccatcaggaggaggagatagaagaggacagcgacctgtcc
gattacggggacgatgtggacgggaagaaggacgccttggctgaaccgtgtttcatgctc
atcggggagatttttgaacttcgaggaatgtttaaatgggtgcgaagaacattgattgct
ctcgttcaggtcacatttggaagaaccatcaacaagcaaatccgggacacggtgaactgg
atcttcagcgagcagatggtggtttactacattagtgctttccgagatgctttctggcca
aatgggaaactggcaccaccaacaagaatcagaagcgaagcacaaagtcaggaaacaaaa
cagagagcacagcaaaaactgcttgaaaacattccagatacacttcagagccttgttgga
cagcaaaatgcccgccatggtataataaaaatattcaaggcgctgcaagaaacaagggcc
aacaagcacctgttatatgtgctgatggagctgctgctgacagagctctgtcctgagctg
agagctcacctggatcagctgaaagctggtcaagtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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