KEGG   Rattus norvegicus (rat): 306804
Entry
306804            CDS       T01003                                 
Symbol
Iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
  KO
K01870  isoleucyl-tRNA synthetase [EC:6.1.1.5]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    306804 (Iars1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rno01007]
    306804 (Iars1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    306804 (Iars1)
Enzymes [BR:rno01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.5  isoleucine---tRNA ligase
     306804 (Iars1)
Amino acid related enzymes [BR:rno01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   306804 (Iars1)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    306804 (Iars1)
 Prokaryotic type
   Other AARSs
    306804 (Iars1)
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 DUF5915 tRNA-synt_1g tRNA-synt_1e
Other DBs
NCBI-GeneID: 306804
NCBI-ProteinID: NP_001094042
RGD: 621022
Ensembl: ENSRNOG00000014616
UniProt: F1LS86 A6J6V4
Position
17:complement(15147357..15193716)
AA seq 1262 aa
MVQQVPENISFPAEEEKILQFWSKYNCFQECLKQSKLRPKFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RAIVMRYSAEWKSTVTRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACGTPLSNFESNQNYKDVQDPSVFVTFPLEEDENTSLVAWTTTPWTLPSNLALCVNP
EIQYVKIKDVSRGKLFILMEARLSALYKQESDYEILERFPGASLKGKKYKPLFDYFIKCK
ENGAFTVLVDHYVKDEEGTGVVHQAPYFGADDHRVCMDFNIIQKDSAPVCPVDASGCFTE
EVTHFVGQYVKDADKNIIRMLKEQGRLLVASTFTHSYPFCWRSDTPLIYKSVPSWFVRVE
HMVDQLLKNNDLCYWVPEFVREKRFGNWLKEARDWAISRNRYWGTPIPLWVSEDFEEVVC
IGSVAELEELSGTKISDLHRESIDHLTIPSRCGKGPLRRVSEVFDCWFESGSMPYAQVHY
PFESKREFEDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLILASDGQK
MSKRKKNYPDPVSIINKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAY
RFFIQNVFRLHKEEEVEFLYNEHTVRESPNITDRWILSFMQSLIAFFETEMAAYRLYTVV
PRLVKFVDILTNWYVRMNRRRLKGENGMEDCVMALETLFSVLLSLCRLMAPYTPFLTELM
YQNLKLLIDPASIRDKDTLSIHYLMLPHVREELIDKKTENAVSRMQSVIELGRVIRDRKT
IPIKYPLKEIVVIHQDPEALEDIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMV
LGKRLKGAFKAVMVAVKQLSNEELEQFQKSGSIVVEGHELHEEDIRLMYTFDQATGGTAQ
FEAHSDAQALVLLDVTPDQSMVDEGMAREVINRIQKLRKKCNLVPTDEITVYYNAKSEGR
YLSNVIESHTDFIYATIKAPLKPYPVPTSDNILIQEQTQLKGYELEITITRGSCVPGPAC
AYVNLNICANGTEQGGVLLLENPKGDNQLNLEKLKSVITSIFGVKSTGLSVFNGGTELQN
QTDLLSLSGRTLCVTAGASLAPASSPSTLLCQYINLQLVNAEPQECLTGTVGTLLLENPL
GQNGLTHQGLVYEAAKVFGLRSRRLKLFLNETQTQEITEDIPMKTLNMKTVYVSVLPTTA
DG
NT seq 3789 nt   +upstreamnt  +downstreamnt
atggttcaacaagttccggaaaacatcagctttcctgctgaagaagaaaaaatcttacag
ttctggtccaaatacaactgtttccaggaatgcctaaagcagtcaaagctcaggccaaag
tttaccttctatgatgggcctcccttcgctactggactgcctcactacggacacatactt
gcggggacaattaaagatatagttacaagatacgctcaccagagcgggtttcacgtcgac
agaagattcgggtgggattgtcatggcttacctgtggagtacgagattgacaagaccctg
gggatcaaagggccagaggacgtggccaagatggggatcgcagagtacaacaagcagtgc
cgagctattgtgatgaggtactccgccgagtggaagtctactgttaccaggcttggccga
tggatcgactttgacaatgactacaaaaccctgtacccacaattcatggaatcagtctgg
tgggtcttcaagcagctgtatgacaaaggcctcgtgtacagaggcgtgaaagtcatgccc
ttctccaccgcgtgtggaactccactctccaacttcgagtcgaaccagaattacaaggac
gttcaggacccttcagtatttgtaacgttccctttggaggaagatgaaaacacatcctta
gttgcttggacaaccactccgtggaccctacccagtaaccttgcgctatgtgtcaatcca
gaaatacagtatgtgaagatcaaagacgtttccagggggaagttgttcattttgatggaa
gccagattgtcggccctctataaacaagagagcgactatgagatccttgaaaggtttcct
ggtgcctctctcaaaggcaagaaatacaagccgttgtttgactactttattaagtgtaag
gagaacggtgccttcaccgtgcttgttgaccactatgtgaaggatgaagaaggcacaggt
gtcgttcaccaggctccttactttggcgctgacgatcatcgagtctgtatggacttcaac
atcattcagaaagactcagcccctgtttgtcctgtggatgcttcaggctgcttcacagag
gaagtgacacattttgtcgggcagtatgtgaaggatgctgacaaaaatatcatcaggatg
ttgaaggagcagggccgactgctcgtggcaagcaccttcactcacagctaccctttctgc
tggaggtcggacactcccctcatttacaagtccgtgcccagctggttcgtgcgggtggag
cacatggtggaccagctactgaagaacaatgatctgtgttactgggtcccagagtttgta
cgagaaaaacggtttggaaattggctgaaggaggcacgtgactgggcaatttcccgaaac
agatactggggcacccccatcccactgtgggtcagtgaagactttgaggaggtagtgtgc
atcgggtcagtggcagaacttgaagaattgtcaggaacaaaaatctcagatctccacaga
gagagcatcgaccacctgaccataccatcccgctgcgggaaaggaccgttgcggcgtgtc
tctgaggtgtttgactgttggttcgagagtggaagtatgccttacgcccaggttcattac
ccctttgagagcaagcgagagttcgaggatgcctttcccgcagacttcattgctgaaggc
atcgatcaaaccagaggatggttttacaccctgctagtgctagccacagccctctttgga
caaccacctttcaagaacgtgattgtgaacggcctcatcttggcaagtgatggccaaaaa
atgagcaaacggaaaaagaactacccagatccggtttccatcatcaataagtacggtgcc
gacgccctcaggttatatctgatcaattcccctgtggtgagagcagaaaacctgcgcttc
aaggaggaaggcgtacgggatgtcctcaaagacgtgctgctcccatggtacaacgcatac
cgcttcttcatccagaacgtctttaggctgcacaaggaagaagaagtagagtttctgtac
aacgagcacacggtccgagaaagccccaacatcaccgaccggtggattctgtccttcatg
cagtcgctcattgcgttctttgagacggaaatggcagcttacaggctgtacactgtggtg
cctcgcctggtcaagttcgtagatattctgaccaactggtacgtccgaatgaacaggaga
agattaaagggggagaatggcatggaagactgtgttatggctctggagactctgttcagt
gtcctgctttctctgtgcagactgatggccccttacacaccctttcttactgaactgatg
taccagaacctgaagctgctgattgaccctgcatctatccgggacaaggacaccctcagc
atccactacctcatgctgcctcatgttcgagaggagctgattgacaagaaaactgagaac
gccgtgtctagaatgcagtccgtgattgagcttgggagagtgattcgagaccggaaaact
attccaataaagtatcccttgaaggaaattgtcgtcatccaccaagacccagaagctctt
gaggatatcaagtccttggagaagtatatcattgaggaactaaatgttcgaaaagttaca
ctgtctactgataaaaacaagtatggcattcgactgagggctgagccagatcacatggtc
cttgggaaacgtctgaagggagcctttaaagcagtgatggtggccgtaaagcagctgagc
aatgaggagctggagcagtttcagaagagtgggagcatcgtcgtggaaggccatgaatta
cacgaagaagatattcgtctcatgtacacctttgaccaggccacaggaggcactgcacag
tttgaagcacactctgatgctcaggctttagttctcttagatgtcacacctgaccagtca
atggtggacgaaggcatggctcgggaagtcatcaatcgcatccagaagcttcgcaagaag
tgcaacctggttccgacggatgaaataacagtttactataatgccaaatctgaaggaaga
tacttgagtaatgtcatcgaaagccacactgacttcatatatgccactatcaaagctccc
ttgaagccctatccagttcctacatcagataatatccttattcaagagcaaacacagtta
aaggggtacgagctggaaatcacgatcaccagaggatcctgtgtgcctgggcccgcttgt
gcttatgtgaaccttaacatttgtgcaaatggcactgagcaaggtggagtgttactcctg
gagaatccgaagggtgataatcagttgaaccttgagaagctgaagagcgtcattaccagc
atattcggtgttaaaagcacagggctgtcagtcttcaacggtggaacagaattacagaac
cagactgacttgctgagcctcagtggaaggacgctgtgtgtgactgcaggagcatccctg
gctccagccagcagccccagcacccttctctgtcagtacatcaacctgcagctcgtgaac
gcagagccacaagagtgtttaacaggaactgtgggcaccctcctgcttgaaaacccactt
ggacagaacgggctcacccaccaagggcttgtgtacgaagcagccaaggtgtttggactg
cgcagccggaggctaaagctgttcctgaatgagactcagacacaagaaattacagaagat
atcccaatgaagactttgaatatgaagactgtatatgtttctgtcttgccaacgactgca
gatggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (37)   

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