KEGG   Rattus norvegicus (rat): 306814
Entry
306814            CDS       T01003                                 
Symbol
Phf2
Name
(RefSeq) lysine-specific demethylase PHF2
  KO
K19414  lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    306814 (Phf2)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    306814 (Phf2)
SSDB
Motif
Pfam: JHD JmjC PHD Cupin_8 PHD_5 ASH2L-like_WH RH_dom
Other DBs
NCBI-GeneID: 306814
NCBI-ProteinID: NP_001402072
RGD: 1305228
Ensembl: ENSRNOG00000016816
Position
17:15989594..16057583
AA seq 1096 aa
MATVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKS
TLKKKRTWHKHGPGQTPDMKPVQNGSQLFIKELRSRTFPSAEDVVSRVPGSQLTVGYMEE
HGFTEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDY
YYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLIC
VKDSYTDFHIDSGGASAWYHVLKGEKIFYLIRPASANLSLYECWRSASNHSEMFFADQVD
KCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSL
TQFPNFETACWYMGKHLLEAFKGSHKSGKQLPPHLVQGAKILNGAFRSWTKKQALAEHED
ELPEHFRPSQLIKDLAKEIRLSENASKTVRPEVNAVASSDEVCDGDREKEEPPSPIESTP
PRSLLEKVSKKKTSKTVKMPKPSKTPKPPKPPKPPKTLKLKDGSKKKGKKCKESASPTIP
NLDLLEAHTKEALTKMEPPKKGKTPKSVLSVPNKDTVHTQNDVERLEIREQTKSKSEAKW
KYKNSKPDSLLRMEEEQRLEKSPLAGNKDKFSFSFSNRKLLGSKPLRPPSSPGVFGTLQS
FKEDKAKPVRDEYEYVSDDGELKIDEFPIRRKKNPPKRDLSFLLDKKETLLIPTSKPKLD
STAYKSDDSSDEGSLHIDTDTKPSRNAKVKKESGSSAAGILDLLQASEEVGALEYNPNSQ
PPASPSTQEAIQGMLSMANLQASDSCLQTTWGTGQAKGGSLAAHGARKNGGSSKGTGKRL
LKRTAKNSVDLEDYEEQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKGSDDAPYSP
TARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKNRKKKNTKRKPTPNTASP
SVSTSASASTGTTSASTTPASTTPASTTPASTTPASTSTASSQASQEGSSPEPPPESHSS
GLADHEYTAAGTFAGAQAGRASQPMAPGVFLTQRRPSASSPNNTAAKGKRTKKGMATAKQ
RLGKILKIHRNGKLLL
NT seq 3291 nt   +upstreamnt  +downstreamnt
atggcgacggtgcccgtgtactgcgtctgccggctgccctacgacgttacccgcttcatg
atcgagtgcgatgcctgcaaggactggttccacggcagctgtgttggggtggaagaggaa
gaggcaccagacatcgacatttaccactgcccgaactgcgagaaaacccatggcaagtcc
acgctcaagaaaaagcggacctggcacaagcatggccctgggcagacaccggacatgaag
ccagtgcagaatggcagccagctgttcatcaaggagctgcggagccgaaccttccccagt
gctgaagatgtggtgtcccgtgtaccaggcagccagctcactgtgggctacatggaggag
catggcttcaccgagcccatccttgtccccaagaaagatggcctgggcttggctgtccct
gccccaacattctacgtgagtgacgtggagaactatgtggggccagagaggagtgtggac
gtgacagacgttaccaagcagaaagactgcaaaatgaagctgaaagaattcgtggactat
tactacagcaccaaccgcaaacgtgttctcaatgtgaccaacctcgagttctcagacacc
agaatgtccagctttgtggagccacctgacattgtgaagaaactatcgtgggtggaaaac
tactggcccgatgacgcgctgctggccaagcccaaggtgaccaagtactgcctgatctgt
gtgaaggacagctacaccgacttccacattgattctggaggtgcctcagcctggtaccac
gttctcaagggggagaagatcttctatctcatccggccggcctcagccaacctctcccta
tatgaatgctggcggtcagcctccaaccacagcgagatgttctttgctgaccaggtggac
aagtgctataagtgcactgtcaagcagggccagaccctcttcatcccctcaggctggata
tacgctacgctcacccctgtggactgcctggccttcgctggacattttcttcacagcctc
agtgtggagatgcagatgagggcatacgaggtggaaagaaggttaaaactaggcagcctg
actcaatttcccaactttgaaactgcctgctggtacatggggaagcatctattggaagca
ttcaaaggttctcacaagtctgggaaacagctgcccccacacttagttcaaggagctaag
attctcaatggtgcttttaggtcatggacgaagaagcaggctttggcagagcacgaggac
gagctcccggagcacttcaggccctcacagctcatcaaggacctggccaaagagatcagg
ctcagcgagaatgcctccaaaactgtccgacctgaagtaaatgctgtcgcctcctcagat
gaggtctgtgacggggaccgggagaaggaggaaccgccatctcccattgagtctacccca
cctcgatccctcctggagaaagtgtccaaaaaaaagacttccaagactgtgaagatgccc
aagccatccaaaacccccaagccccccaagccccccaagccccccaaaaccctgaaactc
aaggacggaagcaagaagaaagggaagaagtgcaaagagtccgcctctcccaccatcccc
aacttggacctgcttgaggcccacaccaaggaggcgctgaccaagatggagccaccgaag
aaaggaaagactccaaagagcgtcctgagtgttcccaataaggacacggtccacacgcag
aatgacgtggaaagactggaaatccgagagcaaacaaagagcaagtcggaggccaagtgg
aagtacaagaacagcaaacctgactctttactgagaatggaggaggagcagaggttggag
aagtcacccctggctgggaacaaggacaagttttccttttctttctctaacagaaaactc
ctgggctccaagcccctcaggccgccgagcagccctggcgtgttcgggaccttgcagagc
ttcaaggaggacaaggccaagcccgtccgagatgagtatgaatatgtatcggacgacggg
gagctgaagattgacgagtttcctatcaggaggaagaagaacccccccaaaagggatttg
tcctttttgttagacaagaaggagactctcctcatccccacctcgaagccaaagctggac
tccacggcatacaagagcgacgactcctctgatgagggctctctgcatatcgacacggac
accaagccaagccgaaatgccaaagtgaagaaggaaagtgggagctcggcggcaggcatc
ctggacctactgcaggccagcgaggaggtcggggctcttgagtacaaccccaacagccag
ccccctgcctcccccagtacgcaggaagccattcagggaatgttgtccatggccaatctg
caggcctctgactcctgcctgcagaccacatggggcactggccaggccaaggggggttcc
ctggcagcccatggcgcccggaagaatggtggtagcagcaaagggacaggcaagcgccta
ctgaagaggactgccaagaacagcgtggatcttgaggactatgaggagcaggaccacctg
gacgcctgcttcaaggactcagactatgtttacccctcactggagtctgacgaagataac
cctgtcttcaagtcccggtcaaagaagaggaaaggctcagacgatgctccttacagcccc
acagccagggtcggtccatcagtgccgagacaagacaggcctgtgcgtgaggggaccaga
gtggcctccattgagactgggctggcagctgctgcagccaagctgtcccagcaggaggag
cagaaaaacaggaagaagaagaacaccaaaaggaagccgactcctaacactgcctccccc
tccgtctccacgtctgcctccgcctccacgggtaccacctcggcctccaccaccccagcc
tccaccaccccggcctccaccaccccagcatccaccaccccggcctctaccagcacagcc
agcagccaggcctcacaggagggcagctcacccgagcccccacctgagtcacacagcagt
ggcctagctgaccacgagtatacagcagccggcacattcgcaggggcccaggctggccgt
gcctcccagcccatggcccctggagtctttctcacacagaggcggccttctgcatcatcc
cccaacaacactgctgccaaaggaaaacgtacaaaaaagggcatggccaccgccaagcaa
aggcttggaaagatcttgaagatccatcggaatgggaaactgctcctctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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