KEGG   Rattus norvegicus (rat): 306941
Entry
306941            CDS       T01003                                 
Symbol
Carmil1
Name
(RefSeq) F-actin-uncapping protein LRRC16A
  KO
K20493  leucine-rich repeat-containing protein 16
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    306941 (Carmil1)
Membrane trafficking [BR:rno04131]
 Others
  Actin-binding proteins
   Nucleation-promoting factors (NPFs)
    306941 (Carmil1)
SSDB
Motif
Pfam: CARMIL_C Carm_PH LRR_6 IL34
Other DBs
NCBI-GeneID: 306941
NCBI-ProteinID: NP_001178621
RGD: 1306623
Ensembl: ENSRNOG00000016576
UniProt: A0A0G2JXG7
Position
17:41235819..41516204
AA seq 1374 aa
MTDESSDVPRELMESIKDVIGRKIKISVKKKVKLEVKGDRVENKVLVLTSCRAFLLSARI
PTKLELTFSYLEIHGVICHKPTQMVVETEKCNVSMKMASLEDASDVLAHIGTCLRRIFPG
LSPLRIMKKVSMEPSERLASLQALWDSQTLAEPGPCGGFSQMYACVCDWLGFSYREEVQW
DVDTIYLTQDTRELNLQDFSHLEHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNLLEELVLENAGLRTDFAQKLASALAHNPNSGLHTINLAGNPLEDRGVSSLSIQF
AKLPKGLKHLNLSKTSLSPKGVNSLCQSLSANPLTASTLTHLDLSGNVLRGDDLSHMYNF
LAQPNTIVHLDLSNTECSLEMVCSALLRGCLQCLAVLNLSRSVFSHRKGKEVPPSFKQFF
SSSLALIQINLSGTKLSPEPLKALLLGLACNHSLKGVSLDLSNCELGHCLRSGGAQVLEG
CIAEIHNITSLDISDNGLESDLSTLIVWLSRNRSIQHLALGKNFNNMKSKNLTPVLDNLV
QMIQDEDSPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNSMGDMGAKMLAKALQ
INTKLRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMYDASQALKTSPEKTEEALQK
IENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRACGGDAIQED
LKAAERLMRDAKNSKTLLPNLYHVGGASWAGASGLSSSPIQEILESMAGEVTRVVDEQLK
GLLESMVDAAENLCPNVMRKAHIRQDLIHASTEKISIPRTFVKNVLLEQSGIDILNKISE
VKLTVASFLSDRIVDEILDSLSNSHRKLANHFSRLSKSLPQREDLEVELVEEKPVKRAIL
TVEDLTEVEKLEDLDTCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVPIHIEDP
PFPSVRQEKRSSGLISELPSEEGRRLEHFTKLRPKRNKKQQPTQAAVCSINIIPHDGEQN
GLMGRVDEGVDEFFTKKVTKMDCKRSSTRCSDTHDLVEGDEKKKRDSRRSGFLNLIKSRS
RSERPPTVLMTEELSSPKGAVRSPPVDTARKEIKAAEHNGAPERTEEMRTPEPLEEGLAE
EAGRAERSDSRGSPQGGRRYVQVMGSGLLAEMKAKQERRAACAQKKLGNDVISQDPSSPV
MSNTERLDGGATVPKLQPGLPEARFGLGTPEKNAKAEPRVDGGCRSRNSSSMPTSPKPLL
QSPKPSPAARPSIPQKPRTASKPEDTPDSPSGPSSPKVALLPPILKKVSLDKERDDQSSS
QSSPRTFSQEVSRRSWGPAQEYQEQKQRNLGKDGHQGSKSSDSGEEAEKEFIFV
NT seq 4125 nt   +upstreamnt  +downstreamnt
atgaccgacgagagctccgatgtcccccgggagttaatggaaagcatcaaggatgttatt
ggcagaaagatcaaaatctcggtgaagaagaaagtgaagttggaagtgaagggtgacaga
gtggagaacaaagtgctggtgctcacatcatgccgagctttcctcctgtcagcacgcatc
cccaccaagctcgagttaaccttcagctatctagagattcatggagtcatctgccacaaa
cctactcagatggttgtggaaactgagaagtgtaacgtgtccatgaagatggcgtcactg
gaggatgcgagtgatgtgctggctcacataggcacctgcttacggaggatatttccgggc
ctttccccactgagaatcatgaagaaagtctccatggagccatctgagcgcctggccagt
ctccaggccctgtgggacagccagaccttggctgagccaggcccctgtggtgggttttct
cagatgtatgcctgtgtatgcgactggctgggattttcgtacagggaagaagtgcagtgg
gatgtggatacaatttatctgacacaagataccagggaattaaatttacaagacttcagt
catctcgagcacagagacctgattcccatcatcgctgccctggaatataaccaatggttc
accaaactgtcctccaaggatctcaagctgtccacggatgtctgtgaacagatcttgagg
gtggtgagtaggtccaatctactggaagagttggtgttggaaaatgctggactcagaaca
gattttgcacagaaattggccagtgctctagcacacaatcctaactcaggacttcacaca
atcaaccttgctgggaacccgctggaggatcgaggcgtgtcctccttaagtattcaattt
gccaaactcccaaagggattgaagcatttgaacctgtctaaaacctcattgtcacctaaa
ggggtgaatagcctttgtcagtccctcagtgccaaccctctgactgcctctaccctcacc
cacctggacctctcagggaatgtcctccgaggagatgacctctcacacatgtacaatttt
ttggcccagcccaacaccattgttcatctggatctgtctaatactgaatgttctctggag
atggtgtgtagtgctctcctccggggatgccttcagtgtctggccgtgctcaatctctcc
aggtctgtcttctctcacaggaaaggaaaggaagtccctccgtctttcaagcagtttttc
agcagttctctggctttgatccaaatcaatctttcaggcacaaaactgtctcccgagccc
ttgaaggcattgctcctgggcctggcctgcaatcatagtttgaagggagtctctctggat
ctcagcaattgtgagcttggccactgtctgaggtccggaggagctcaagtgttagaaggc
tgtatcgctgaaatccacaacatcaccagcttagatatctctgacaacggtttagaatct
gacctatctaccctgattgtgtggctcagtagaaacagatcaatacagcacctggcgtta
ggcaaaaattttaacaatatgaaatccaaaaatctgacgcctgtgttggacaacttagtg
cagatgatccaagatgaagactctcctctgcagtccttgtccctggctgactcaaaactc
aagactgaagtcaccatcatcatcaatgccttgggcagcaacacctccctgaccaaagtg
gacatcagtgggaatagcatgggggacatgggagcgaagatgctggctaaggctctacag
atcaacaccaaactcaggacagtcatctgggacaaaaacaacattactgcacaaggcttc
caagacatagccgttgctatggaaaagaactacacactgagatttatgccaattccaatg
tatgatgcttctcaagctcttaaaacaagccctgagaagacagaagaggctctgcagaag
atagaaaattatctgctccggaatcacgagaccaggaaataccttcaggagcaggcctac
cgcctccagcaaggcattgtcaccagcaccacccagcagatgattgaccggatatgtgtg
aaggttcaggatcacctcaactccttacgagcctgtgggggggatgctattcaggaggat
ttaaaggcagcagagcggctcatgcgagatgctaagaattctaaaacgttgttaccaaat
ttataccatgtgggcggagcatcatgggcaggagccagtgggctgtcatccagtcccatt
caggagatcctggagtcaatggccggagaagtcacaagagttgtggatgaacaactgaag
ggtttgctagaatctatggtggatgcggccgagaacctctgccccaatgtcatgagaaaa
gcccacatccgacaagacctgatccacgccagcaccgaaaagatttccattccacgaacc
tttgttaaaaatgtcctgttggaacagtctggaattgacattcttaacaaaattagtgag
gtgaagctgacagtggcctcgttcttgtctgaccgaatcgtagatgagatcctggattct
ctctccaacagccatcggaagctggccaaccatttcagcaggctaagcaagagccttccc
cagcgagaggacctagaggtggagctggtggaggaaaagccggtgaaacgggccatactt
acggttgaggatctcactgaggtggagaagctggaagacctagacacttgtatgatgact
cctaagtccaagaggaagagcatccacagccgaatgctgcggcctgtctccagggccttt
gaaatggagtttgatcttgataaagccctggaagaggtgccgattcacatcgaagacccg
cctttcccatcagtccggcaggagaagcgaagctcgggcttgatctctgagctgccctca
gaggaaggcaggagactggaacacttcaccaagttaaggcccaagaggaacaagaagcag
caacctacacaagcagcggtctgtagcatcaacatcatcccccatgatggagaacagaat
ggcctcatgggcagagtggatgaaggtgtagatgaatttttcaccaagaaggtgactaaa
atggattgcaagaggtcatccacgcgctgttcagatacccacgacctcgtagaaggagat
gagaagaaaaaacgggattctcggagaagtggctttctcaacctaattaaatccaggtcc
agatctgagcggccgcccacggtcctgatgacagaagagctctcctccccgaaaggggca
gtccggagcccaccagtggataccgccaggaaggagataaaggcagctgagcacaatggt
gctccagaacgcacagaggagatgaggacaccggagcccctggaggagggtctagcagag
gaagctggcagggctgagcgcagtgacagcaggggcagcccacagggtggccggcgctat
gtgcaggtgatgggcagcgggctgctggcggagatgaaggctaaacaggagcggagagca
gcatgtgcgcagaagaagcttggcaacgatgtcatctcccaggatccctccagcccagtc
atgagcaacacagagcgattagatggaggggcaacagtgcctaaactgcaaccaggtctt
ccagaggcccgctttggtttgggaacaccagaaaagaatgccaaagctgaacccagggtg
gatggaggctgcaggtcccgaaactcctccagcatgcccaccagcccgaagcccctcctt
cagtcccctaagcccagccctgcagcccggccgtctatccctcagaagccaagaactgcc
tccaaacctgaagataccccagactctccatctggtcctagttcccctaaagttgccctt
cttccacccatcctcaaaaaagtctccttggacaaagagcgtgatgaccagagcagctca
cagtccagtcctaggaccttctcccaggaagtctcaaggagaagctggggcccagcccag
gagtatcaagaacaaaagcaacggaacttgggcaaagatggtcaccaggggagcaaatcc
agtgactctggagaagaggcagaaaaagagtttatttttgtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (20)   
   UniProt (1)   
   RefSeq(pep) (19)   
DNA sequence (19)   
   RefSeq(nuc) (19)   
Protein domain (4)   
   Pfam (4)   
All databases (52)   

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