KEGG   Rattus norvegicus (rat): 307106
Entry
307106            CDS       T01003                                 
Symbol
Sfmbt2
Name
(RefSeq) scm-like with four MBT domains protein 2
  KO
K26269  scm-like with four MBT domains protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    307106 (Sfmbt2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    307106 (Sfmbt2)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     PRC1.4 specific proteins
      307106 (Sfmbt2)
SSDB
Motif
Pfam: MBT SLED SAM_1 SAM_PNT SAM_2 SAM_Ste50p
Other DBs
NCBI-GeneID: 307106
NCBI-ProteinID: NP_001100834
RGD: 1305027
Ensembl: ENSRNOG00000029235
UniProt: A6JLT9 D4A643
Position
17:complement(72844037..73038599)
AA seq 890 aa
MERRLPVLKIRTSSSSLERITSPENGNGSLDTEEDSRQEETEFSWGDYLDETGARAVPHV
CFRHVEISIQSNFQPGMKLEVANKNHPDTYWVATIITTCGQLLLLRYCGYGEDRRADFWC
DVIIADLHPVGWCTQNNKVLRPPDAIKEKYADWEEFLIHELTGSRTAPASLLEGPLRGKG
PIDLITVDSLIELQDSQNPFQYWIVSVIENVGGRLRLRYVGLEHTESYDRWLFYLDYRLR
PIGWCQEKKYRMDPPSELYYLKLPFEWKCALEKALLAAAECPLPMEVFKDHADLGSHFFT
VGMRLETLHINDPFHIYPATVTKVFNSQFFQVAIDDLRAETNGLTMLCHADSLGILPVQW
CLKNGVNLAPPKGYSGQDFNWVDYHKQREAEGAPPYCFKNTFARGFAKNMKLEAVNPKNP
GEVCVATVISVRGSLLWLRLEGVETPMPEIIVDIDSMDIFPVGWCEANSYPLTTPYKSSS
KSKKKPITVPPEKPSLPPVPVENIPQELCLPPQTDTAAGAANEKYYCPQLFVNHRCFSGP
FLNKGRISELPQSVGPGKCVLVLKEILTMITNAAYKPGRVLRELQLVEDPEWDFQEEVLK
AKYRGKIYRAVVKIVRTADQVTSFCQQVCAKLECCPNLFSPLLISENCPENCSIRTKTKY
TYYYGKRKRIIKPPLGESNTESAPKPTRRRKRRKSIYVQKKRKSSAVAMPATSAQETEED
DPEALDTASEETGYVVQNYKTQHVPVEMPFTRSQRAMILRKHSGAVKHPPVERARRVRSV
HSTASSNNRNKVPLVRIEKSEDPRQSEEEKLILESNPLEWSVTDVVRFIKLTDCAPLARI
FQEQDIDGQALLLLTLPTVQECMELKLGPAIKLCHQIERVKVAFYAQYAN
NT seq 2673 nt   +upstreamnt  +downstreamnt
atggagagacgtttgccagttttgaagatccgcacctcatcctcctctctggaaaggatt
accagcccagaaaatgggaatgggagtcttgacacagaggaagattccaggcaggaggaa
actgagttcagctggggagactatttggatgagacgggtgccagagcggtaccacacgtg
tgcttcagacatgtggagatcagcattcagagtaacttccagccaggaatgaagttggag
gtggccaacaagaaccatccagacacttactgggtggccacgatcatcaccacctgtgga
cagctgctgctcctgcgttactgtggttatggggaggaccgaagggctgacttctggtgt
gatgtcatcatagcagatctgcaccctgtggggtggtgtactcagaacaacaaggtgttg
aggcccccggatgctatcaaagagaagtatgccgactgggaggaattcctcatacatgaa
ttgactggttctcggacagcacctgcaagccttctggaaggtcctctgcgagggaaaggc
ccaatagacctcattacagttgattccttaatagagctgcaggactctcagaatcccttt
cagtactggatagttagtgtgattgaaaatgtcggaggaagattacgccttcgctatgtg
ggattggagcacactgaatcctatgaccggtggttattttacttggattacagacttcga
ccaattggttggtgtcaagaaaaaaaatacagaatggatccaccttcagaactttattat
ctgaagttgccttttgaatggaaatgtgcactagaaaaagccttgcttgccgctgcagag
tgtccccttccaatggaagtatttaaggaccatgcagacttgggaagccatttctttaca
gttgggatgcggctggagacattgcacatcaatgatccctttcatatctatcctgcaaca
gtgaccaaggtttttaacagtcagtttttccaagtggccattgatgacttaagagccgag
actaatggactcacaatgctgtgccacgcagattctttggggattttgccagtacagtgg
tgccttaaaaatggagtcaacctcgctcctcccaaaggttactcaggccaggattttaac
tgggtggattatcacaagcagcgcgaggccgaaggagcccctccttactgcttcaaaaat
acatttgctcggggctttgcaaagaacatgaagcttgaagctgtgaaccccaagaatcca
ggagaggtgtgcgtggccactgtgatcagcgtgagagggagtttgttatggctccgttta
gaaggtgtggagacaccgatgccagagatcattgtggatatagattccatggacatcttc
cccgtaggctggtgtgaagcgaattcttaccctttgaccacaccatacaagtcgtcctca
aaaagcaagaaaaaaccgatcactgtacctccggaaaaaccatcgttacccccagtgcct
gttgagaatatacctcaagagctttgcctgccccctcagacggacaccgcagcaggagcc
gccaatgagaagtactactgcccacagctgttcgtcaaccaccggtgtttctcaggcccg
ttcctgaacaaaggaaggatttcagaactacctcagtccgtgggacctggcaagtgcgtg
ctggtgcttaaagagattcttaccatgattaccaatgcagcctacaagcccgggagggtg
ttgagagagttacagctggtagaagatccagagtgggatttccaggaggaggtgctcaag
gcaaaataccgaggcaaaatatacagggccgtggtcaagatcgtgcggacagcagaccaa
gtaacaagcttctgccagcaagtttgtgccaaactggagtgctgtccgaacttattcagt
cccctgctgatctctgaaaactgcccggagaattgttccatccgcaccaaaaccaaatac
acctattactatgggaaaaggaagaggatcattaaacctccactcggagaaagcaacact
gaaagcgcaccaaaacccaccaggagaaggaaacgaagaaaatcaatctatgtgcagaag
aaacggaaatcctctgcggtggccatgccagcgacctcggcacaggaaactgaagaggac
gatccagaggccctggacactgcaagcgaggaaactggttacgtggtccagaattacaag
acacagcatgtaccagtagagatgccctttacccgttcacagagggctatgatcctgagg
aaacattcaggggctgtaaagcaccctccagtggaaagggcacggagggtccgctcagtg
cactctactgcctcttctaataacagaaacaaggttccacttgtcaggattgagaaatca
gaggacccaaggcagtcggaggaggagaaactgattcttgagagcaatccgctggagtgg
tccgtcacagatgtggtgcgattcattaagctgactgactgtgcacctttggccaggatc
tttcaagagcaggacatcgatggccaggctctcctcctgctcactctcccaacagtgcag
gagtgcatggagctgaagctaggacctgcgatcaaattatgccatcagatcgagagagtg
aaagtggctttctacgcccagtacgccaattag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (2)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (2)   
   Pfam (2)   
All databases (42)   

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