KEGG   Rattus norvegicus (rat): 307350
Entry
307350            CDS       T01003                                 
Symbol
Afg3l2
Name
(RefSeq) AFG3-like protein 2
  KO
K08956  AFG3 family protein [EC:3.4.24.-]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05017  Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    307350 (Afg3l2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    307350 (Afg3l2)
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:rno03110]
    307350 (Afg3l2)
Peptidases and inhibitors [BR:rno01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   307350 (Afg3l2)
Chaperones and folding catalysts [BR:rno03110]
 Other chaperones and cochaperones
  AAA proteases
   307350 (Afg3l2)
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext AAA_22 AAA_5 RuvB_N AAA_16 TIP49 nSTAND3 AAA_17 AAA_14 AAA_2 AAA_28 IstB_IS21 Mg_chelatase AAA_33 LonB_AAA-LID gpW
Other DBs
NCBI-GeneID: 307350
NCBI-ProteinID: NP_001128336
RGD: 1305259
Ensembl: ENSRNOG00000017965
UniProt: F1LN92
Position
18:complement(63224163..63269000)
AA seq 802 aa
MAHRCLLLWGRGGCRRGLPPLLVPSGCLGPGRRPCLRTLYQYATVQTANSRSSLLRDVIA
AYQRFCSRPPKGFEKYFPNGKNGKKASESKEAVGEKKESQLSGPQSSGGASGGGGKRRGK
KEDSHWWSRFQKGDFPWDDKDFRMYFLWTALFWSGVMIYFLFKSSGREITWKDFVNNYLS
KGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRV
PVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAKVLKD
EIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKAT
AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF
GGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIK
GRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAIN
EKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK
GLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQI
VQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISEAYKRTVALLTEKKA
DVEKVALLLLEKEVLDKNDMVELLGPRPFTEKSTYEEFVEGTGSLDEDTSLPEGLQDWNK
EREKEKKEKKEKEEPVNEKVVS
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggctcaccgctgcctgctgctgtggggtcggggcggctgccgtcgcggccttcctccc
ctgctcgtgcccagcggctgcctgggtcccggccggcggccctgcctccgtacgctttat
cagtacgctacggtccaaacagcaaacagcagaagttctcttctaagggatgtaattgct
gcttatcaaagattctgttctcgacctcccaaaggatttgaaaaatactttcctaatggg
aaaaatggaaaaaaggccagcgaatctaaggaagctgttggagaaaaaaaagaatcacaa
ctctccggtccccagtcttctggaggtgcaagtggtgggggagggaagcgccgtggcaag
aaagaagattctcactggtggtccaggttccagaagggtgactttccatgggatgacaag
gatttcaggatgtactttctctggactgctcttttttggagtggagtcatgatttacttc
ctgttcaagagctctgggagagaaatcacatggaaagactttgtcaataactatctttct
aaaggagtggtggacagactagaagttgtcaacaaacgttttgttcgtgtgacctttact
ccaggaaaaactccagttgatgggcaatacgtctggtttaatattggcagtgttgacaca
tttgagcggaatctggagactttgcagcaagaattgggcatagaaggggagaaccgggtg
cctgtggtttacattgctgaaagcgatggctccttcctgctgagcatgttgcccacggta
ctcattattgcttttctactctacaccataagaagagggcccgctggcattggtcggacc
ggtcggggaatgggtggactcttcagtgttggggaaacgacagccaaggtcttaaaggat
gagatagatgtgaagtttaaagatgtggctggctgtgaggaggccaagctagaaataatg
gaatttgtgaatttcttgaaaaatccaaagcagtatcaagacctaggagcaaaaatccca
aagggtgccattctcactggtcccccaggtactgggaagacactgctagctaaggccaca
gctggagaagccaatgtccccttcatcactgtcagtggatctgagtttctggagatgttt
gtcggtgttggtccagccagggtccgagacttatttgcccttgcacggaagaatgctcct
tgcattctcttcattgacgagattgatgctgtgggaaggaagcgtggtagaggcaacttt
ggaggacagagtgagcaggagaacacactcaatcagctgctcgtggagatggacggcttc
aacaccaccaccaacgtggtcatcctggcaggcacaaatcgaccagacatccttgatcca
gctctgctgagaccaggccgctttgacaggcagatcttcattggacccccagacataaaa
ggacgagcttcaatcttcaaagttcaccttcgaccattgaaactagacagtgccttggaa
aaagataaattggccagaaaactggcgtccttgactccagggttttcaggcgctgatgtt
gccaatgtctgtaatgaagctgctttgattgctgccagacacctttcagatgccattaac
gagaagcacttcgaacaagcgattgagcgagtgattggaggcttggagaaaaaaacccaa
gttctgcaacccgaggagaagaagactgtggcttaccacgaagcaggccacgcagtcgcc
ggctggtatctggagcatgcagacccactcttaaaggtgtccatcatcccgcgtggaaag
gggctgggctatgctcagtacttgcccaaggagcagtatctgtacacaaaggagcagctg
ctggacaggatgtgcatgactctgggtggccgtgtctccgaggagatcttctttggaaga
attacgaccggtgcccaggatgacttgaggaaggttacccagagtgcctatgcccagatt
gttcagtttggcatgaatgagaaagtggggcagatctcctttgacctcccacgacagggg
gacatggtattagagaagccttacagtgaagccactgcaagaatgatagacgatgaagtg
aggatactcattagtgaagcctataaaagaactgtggctcttctcacagagaagaaggct
gacgtggagaaggttgctctcctactgttagagaaagaagtattagacaagaacgacatg
gttgaacttctgggtcccagaccatttacagaaaaatccacatatgaagaatttgtggaa
ggcactggcagcttagatgaggacacttctcttcctgaaggccttcaggattggaacaag
gagcgggagaaggagaagaaggagaagaaggagaaggaggagcccgtgaatgagaaggtg
gtcagctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (19)   
   Pfam (19)   
All databases (40)   

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