KEGG   Rattus norvegicus (rat): 307393
Entry
307393            CDS       T01003                                 
Symbol
Sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeats-containing protein 2
  KO
K24313  SH3 domain and tetratricopeptide repeat-containing protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    307393 (Sh3tc2)
Membrane trafficking [BR:rno04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    307393 (Sh3tc2)
SSDB
Motif
Pfam: SH3_2 SH3_1 TPR_12 SH3_9 TPR_8 TPR_1 TPR_2 SNAP TPR_MalT TPR_7
Other DBs
NCBI-GeneID: 307393
NCBI-ProteinID: NP_001414025
RGD: 1309038
Ensembl: ENSRNOG00000019305
Position
18:57686701..57747735
AA seq 1288 aa
MGGCFCIPGERSLPWGPGKEGSSKDPPGLTEDISSLENKRKCFLPQNMTQDLVLSFWVRS
RSRRCVNAALQEAARRRLWALENEAHEVHALFKDLSARLVSVQSQKDQFLITFKTLEEIW
KFSTYLNLGYVSTCLEHLFFDHTYWLNSRLVDDTEIQVSVDDTHLENIYLGLLLQEGHFF
CRAMCSVTQPADKEGEYLTLCKNELISVLSGGESDWEGMSLVTGQRGLVPVSALEPLPVS
FHQWFLKNHPGICGLPRKKDWTGSCQIGRGRCKALMDYQQEERDELGFLQGESIDVIGFV
IPGLRWFIGKSMSSGKVGFVPTRSIDLDSCSPVSKNSVFFSDEERCSLWSPGGDRKAECS
GFLSALAHTDITSVYRLSEFESIQNLQNDLSASQPEGFREARSGGTWMERKTMGSRRSSS
SLDSSLEDELISASSDSYHLPEPDDLDDPELFMDLSTSLEEDEMEHFAPILAFLDHEGYT
DHFKSLYDFSFSFLTSSFYSFSEEDELVAYLETSRKWAKMTHRTWAHARLCFLLGRLSIR
KTKLSQARVYFEEAIRVLDGAFEDLSLVAALYINLAAIYLRQRLRHKGPILLEKAGALLA
CLPDREFSAKNELDVVTYVLRQGIVAGSGPLEARSCFLAIRLLLNLGRHEEVLPFAERLQ
LLSGHSPASEVTATMLSSLYDKKYLPHLAVASVQKRGPQSARGMSVAIWQAYLVLQNATK
ILGVPFSSWCEVSALACPTLRQALAACEEQTDLNIQRTLCLLLSKMYLQHRSPDGSVQYL
SQAHVLGKLLGEEEAFESSLCLAWAYLLARQTKKALEILEPLLCSLRETECVTQRGVVHN
LLGLAFQDEGRTSRAAKSYLRALIRAREMGNIRNQAVSMANLGHLTLKSCMQQSARGYLL
QAVRLYSEIQASKETDMELVQVLLWLGQALVSGHQLVHSRLCYEMALLFGLRHRHLNSQL
QVTKSLCHFYSSVSPNPDACITYHEHWLALAQQLRDREMEGRLLESLGQLYRNLNTSRSL
RRSLACIKESLRIFVDLGERDKAAEAWLGAGRLHYLMQEDELVEVYLQEAIQTALRSEEL
SLALKLYEEAGDVFFNGTRHRHRAVEYYRAGAVPLARRMKALRTELRIFNKLTELQISLR
GYEKALEFATLAARLSVLTGDQKQELVAFHRLATVYFSLNMYEMAEDCYLKTLSLCPPWL
QSPKEALYYAKVYCRLGRLTFYQLKDAHDATEYFLLALAAAVLVGDEELQDTIKNRLDSI
CQSPLWHSKPLGCSSERSRWLSGGSLAL
NT seq 3867 nt   +upstreamnt  +downstreamnt
atgggtggctgcttctgtatccctggggagcggagtctaccctggggcccaggtaaagaa
ggttcttccaaggatccgcctggattgactgaggacatatcctcacttgaaaacaagaga
aaatgtttcctgccacagaatatgactcaagacctggtgctctcattctgggtgaggagt
cgttccaggaggtgtgtcaacgcagccttacaggaagctgcacggaggaggctctgggcc
ctggagaatgaagcccacgaagtccatgcactgtttaaggatctctctgcaaggttggtg
agtgtccagtcccagaaggaccagttcctcatcaccttcaagaccctggaggaaatctgg
aagttttccacgtacctgaacttaggctatgtgtctacatgtctggaacacctcttcttt
gaccacacgtactggctcaacagcagactggtggacgacacagagatccaagtgtctgtg
gacgacactcacttggaaaacatatacctgggcctcctgctgcaggaaggtcacttcttc
tgcagagccatgtgctctgtgactcagccagctgacaaggaaggagaatatttgacattg
tgtaagaacgagctgatctccgtactctctgggggcgaatccgactgggaaggcatgtcc
ttagtgacgggccagaggggcctggtgccggtgtcagccctggaacccctgcctgtctct
ttccaccaatggttcctaaagaatcacccaggaatctgtggccttcccaggaagaaagac
tggacaggctcctgtcagatcggcagaggacggtgcaaggctctgatggattaccaacag
gaggaaagggacgaactgggcttcctccagggtgaaagcattgacgtcatcggctttgtc
atacctgggctgcggtggttcattgggaagtcaatgagctcaggaaaagtgggctttgtc
cccaccaggagcatagatctcgattcctgctccccggtgagcaagaactctgtctttttc
agtgatgaggaaaggtgttctctctggtccccaggaggtgacaggaaggctgagtgctct
ggcttcctaagcgcactcgctcatactgacatcacctctgtctaccggctgagtgagttt
gaatccatccagaatcttcagaatgacttgagcgcatctcagcccgagggcttcagggag
gccaggtctggtgggacctggatggagcggaagaccatgggctccagacgttccagcagt
tctctagactccagccttgaggatgagctcatctcagcctcctcagacagctatcacctt
ccagagcctgatgacctcgatgacccggaactgttcatggacctaagcactagcctggaa
gaggatgagatggagcactttgcccccatcttggcttttctagatcatgaaggctacact
gaccacttcaagagcctctatgatttctccttctcttttcttacttcgtccttttacagc
ttctctgaggaggatgagctagtggcctacctagagacttcaaggaagtgggccaagatg
acccacaggacgtgggcccatgcccggctctgcttcctcctgggcagactaagcatcagg
aagaccaaactttcccaggccagggtatactttgaggaggccattcgagtccttgacggg
gcgttcgaggacctctccctggtggctgctctgtacatcaacttggcagccatctacctg
aggcagaggctaagacataaagggccaatcctgctggaaaaggcaggtgctctgctggcc
tgcctgccagaccgtgagttcagtgccaagaatgagcttgacgtggtgacttatgtgctt
cgccaagggatcgtggcggggagtggccctctggaggctaggtcctgcttcctggccatc
cggttgctcctgaatcttggccggcatgaggaagttctgccatttgcagagcgtctgcag
ctcctttctggacactctcctgcttcggaggttacagccaccatgttgagttctctgtat
gacaagaaatatcttccacatcttgcagtggcctccgttcagaaacgtggtccccagagt
gcccgggggatgtctgttgccatttggcaggcttatttggttctccagaatgccacaaag
atcctgggtgttcctttttcaagctggtgtgaagtttctgcactggcctgcccaaccctc
aggcaggccctggctgcctgtgaggaacagactgacctgaacatccagaggaccttgtgt
ctcctcctgtccaaaatgtacctccagcacaggtctcctgatggttctgtccaatacctg
agtcaagcacatgtgttagggaaactcctgggtgaagaggaagcctttgaatcttctctc
tgtctggcatgggcttatctcttagccaggcagacgaagaaggctttggagatcctcgaa
ccgctactgtgttccttgagggagacagagtgtgtgacccagaggggagtggtccataac
ctcctgggactggcctttcaagatgaaggtcggacaagcagggcagccaagagctatctc
cgagctttgatcagagctcgggagatggggaatatacgtaaccaggctgtgtctatggcc
aatcttggtcacttgaccctcaagtcctgtatgcagcagtcagccaggggttatctcctg
caggctgtccgactgtattctgaaatccaagccagcaaggagacagatatggaattggta
caagtgttactctggttgggccaagctctggtgtctggacaccagctggtccacagccgc
ctttgttatgaaatggcactgctatttggcttaaggcaccgacacctaaacagtcaactt
caggtcaccaaatccctctgccatttctacagctccgtgtccccaaaccctgacgcgtgc
attacctatcatgaacactggctggccttggctcaacaactcagggaccgggagatggag
gggcggttactggagtcccttgggcagctttataggaacctaaatacatccaggtccctc
agaaggtccctcgcctgcatcaaggagagcctgcggatattcgtcgacctaggggagaga
gacaaggctgctgaggcctggctgggggccgggcgcctgcactacctcatgcaggaagac
gagctggtggaagtgtatttgcaggaggccatccagacagccttgaggtcagaagagctc
tccctcgctctcaagctttatgaagaagcaggtgatgtgttcttcaatgggacccgccat
agacatcgggctgtggagtattaccgggctggggctgttcctttagcgaggagaatgaag
gccctgcgaaccgagctgcggatcttcaacaagctgacggagctgcagatcagcctccgg
ggctatgaaaaagctttggaatttgccactctggctgccaggctgagtgtcctcacagga
gatcagaaacaggagctggtggcttttcaccgcctggcgaccgtgtacttctctctgaac
atgtatgagatggctgaagactgctacctgaagactctatccctgtgcccgccatggctg
cagagtcccaaggaagcgctgtactatgccaaggtgtattgtcgcctgggccgactcact
ttctaccagctgaaggatgcccatgatgctactgaatactttttgctggcactagcagct
gcggtcctggtgggtgacgaggagctgcaggacaccattaagaacaggctagacagcatc
tgccagagtcccttgtggcacagcaaacccttggggtgctcttcagagaggtcacggtgg
ctcagtggtgggagcctggccctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (57)   

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