KEGG   Rattus norvegicus (rat): 307485
Entry
307485            CDS       T01003                                 
Symbol
Taf7
Name
(RefSeq) transcription initiation factor TFIID subunit 7
  KO
K03132  transcription initiation factor TFIID subunit 7
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    307485 (Taf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    307485 (Taf7)
   03036 Chromosome and associated proteins [BR:rno03036]
    307485 (Taf7)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     307485 (Taf7)
   Coactivators
    SAGA/TFTC/STAGA complex
     307485 (Taf7)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     307485 (Taf7)
SSDB
Motif
Pfam: TAFII55_N Tweety
Other DBs
NCBI-GeneID: 307485
NCBI-ProteinID: NP_001100864
RGD: 1309935
Ensembl: ENSRNOG00000020024
UniProt: A0A8I6ABH9 B0BN78
Position
18:complement(29704182..29713382)
AA seq 341 aa
MSKSKDDAPHELESQFILRLPPEYAATVRRAVQSGHVNLKDRLSIELHPDGRHGIVRVDR
VPLAAKLVDLPCVTESLKTIDKKTFYKTADISQMLVATVDGDLYPPVEEPAATADPKANK
KKDKDKEKKFVWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTDAEAVSTR
WEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLSSSSEDEEDVNIID
TEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDNMKGKLQETQDRAKRQEDLIMK
VENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLLEK
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgagtaagagcaaagatgatgcacctcatgagctagagagccagtttatcttacggttg
cccccagaatatgccgctactgtgaggagggcagtgcagtctgggcacgtcaacctgaaa
gatagactgagcattgagttacaccctgatgggcgtcatgggattgtcagagtggataga
gtgcccctggctgcaaaattggtagatttgccgtgtgttacggagagcttgaaaaccatt
gataaaaaaaccttttacaagacagctgatatctctcagatgcttgtagccacagtagat
ggtgatctataccctcctgtggaggagccagctgctactgctgatcccaaagcaaacaag
aaaaaagataaggacaaagagaaaaaatttgtttggaaccatggaattactctacctcta
aaaaatgtcagaaagagaaggttccggaagacagcaaagaagaagtacattgaatctcca
gatgtggaaaaagaagtaaagcggctgctgagtacagatgcagaagctgtcagtactcgt
tgggagataattgctgaagatgaaacaaaggaggcagaaaatcaaggccttgatatctcc
tctcctggaatgtctggccacaggcagggccatgactcactagagcatgatgagcttcga
gagatattcaatgacctcagcagcagcagcgaagatgaagaagatgtaaacatcattgac
actgaagaggatctggagagacagctacaggacaagctaaatgagtcagatgaacaacac
caagaaaatgaaggaaccaatcagttggttatggggattcagaagcagattgataatatg
aaaggcaagcttcaagaaacccaagacagagcaaagcgccaggaggatctcatcatgaag
gtagaaaacctggctctgaagaacaggtttcaagctgttctggatgagctcaaacagaag
gaagaccgggaaaaggagcagcttagctctttgcaagaagagctggaatcacttctggag
aagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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