KEGG   Rattus norvegicus (rat): 307487
Entry
307487            CDS       T01003                                 
Symbol
Pcdhb21
Name
(RefSeq) protocadherin beta-11
  KO
K16494  protocadherin beta
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    307487 (Pcdhb21)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   307487 (Pcdhb21)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_3 REJ
Other DBs
NCBI-GeneID: 307487
NCBI-ProteinID: NP_001108076
RGD: 1305349
Ensembl: ENSRNOG00000033479
UniProt: A6J377 G3V9G0
Position
18:29492219..29495152
AA seq 757 aa
MESVVGAAQHVRQVLVFFVFLEGSLVLSETWSYSVAEETETGSSIGNIIKDMDVGDLAAR
GARVIFDDYQPYLRLELETGNLLLNKKLDREALCSTSEPCILHFQVLLENPLQFFQAELL
IEDINDHTPTFLEKLIFLNISEGATPGTAFQMDNAQDLDIGMNGILNYSISPNPYFYLKL
KDSGKGRRYPELVLARSLDREKEASISLILIAIDGGSLPRTGAVQVQVVVLDVNDNAPEF
EKTLYEVQVPENSSVDSLVIKVSAKDLDSGINGEVSYSFSHISRDVQKTFEIHPISGEIH
LKTVLDFEVIPSYTINVQAIDGGGLSGKSAIIVQVTDVNDNPPEIVITSLMSPIQENSLS
EMVVAIFSLRDQDSGENGRMICSIQDKLPFLLKPTFKNFYTLVTEHPLDRESRAEYNITI
TVSDLGTPRLTTQHTITVQVADINDNAPAFTQTSYTIFVQENNRPALHIGTITATDSDSG
SNAHITYSLLPFHDPQLSLASLISVNADNGQLFALRALDYETLQTLEFHVGATDGGSPAL
SSQALVRVMVLDDNDNAPFILYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNAW
LSFQLLKATEPGLFSIWAHNGEVRTTRMLSEHDVPKHKLLLLVKDNGEPPRSASVTLHLL
VVDGFSQPYLPLPEVALDPTNVDEEALTLSLVIALASVSSLFLLSVLLFVGVRLCRKATT
ASLGGYSVSEGHFPGHLVDFSGAETLSQSYQYKVCLT
NT seq 2274 nt   +upstreamnt  +downstreamnt
atggagtctgtggttggagctgctcagcatgtaaggcaagtgctggttttctttgttttc
ctggaagggtccttggttctttcggagacctggagttattctgtggcagaagaaacggag
actggctcctctataggtaatatcattaaagatatggatgtaggtgacctggctgcacgg
ggggccagagttatatttgatgactaccagccttatttgcggttagaactggagactggc
aacttgcttttgaataaaaaactggacagggaggcactttgttctaccagtgaaccctgt
atattgcatttccaggtgttattggagaatcctctgcaattttttcaggctgagcttttg
attgaagacataaatgaccatacccccacatttctagaaaaactcatatttctaaatatc
tcagaaggtgctactccaggaaccgcattccaaatggataatgctcaagacttggatata
ggaatgaatggtatcctaaactattcaataagccctaacccctatttctaccttaagtta
aaagacagtggtaaaggaagaagatatccagagctggtactggctagatctctggacaga
gaaaaggaggcttcaattagcttaatactaatagccatagatggtgggtctttgcccagg
acaggggctgtacaggttcaagtcgtggttctggacgtcaacgacaatgcccctgagttt
gaaaaaaccctgtatgaggtccaagtaccagagaacagttccgtggactcactagtaatc
aaggtgtctgctaaagatttagattcaggaataaatggagaggtatcttactcgttttct
catatctctagagatgtacaaaaaacattcgaaatccatccaatctctggtgaaatccac
ttgaaaacagtcctagattttgaggtaattccgtcttatacaataaatgttcaagccatt
gatggtggtggtctctctggaaaatcagccattattgttcaggttacagacgtgaatgac
aatccaccagaaatagtcattacatcccttatgagccctatccaagagaacagtttatca
gagatggtggttgccattttcagtttacgtgaccaggactctggtgaaaatgggagaatg
atttgttcaattcaagacaaactcccttttctattgaaacctactttcaaaaatttctac
actctagtaacagagcatccactggacagagagagcagagctgagtacaacatcaccatc
actgtctctgacctgggcacacccaggctcacaacccagcacaccataacagtgcaggtg
gcagacatcaacgacaacgcccccgccttcacccagacctcctacaccatatttgtccaa
gagaacaatagaccagccctacatataggcaccatcactgccacagactcagactcaggc
tccaatgcccacatcacttactcgctgctgccattccacgacccacagctgtcgctcgcc
tcgctcatctccgttaacgcagacaatgggcagttgttcgccctcagggcactggactat
gagaccctacagaccttagagttccatgtgggtgccacagacggaggctcgcccgcactc
agcagccaggctctggtgcgtgtgatggtgttggatgataatgacaatgcgcccttcata
ctctacccgctgcagaacgcctcagcaccctgcactgagctgctgcctagagcagcagag
cctggatacctggtcaccaaggtggtggctgtggatcgtgactctggccagaatgcctgg
ctgtcttttcagctgctcaaagccacggagcccgggctgttcagcatatgggcacacaat
ggtgaggtgcgcaccaccaggatgctgagtgagcacgatgtgcccaagcacaaactgctg
ctactggtcaaggacaatggagagcctccgcgttctgccagtgtcacgctgcacctgttg
gtagtggatggcttctctcagccctacctgcctctgccagaggtggcgctcgaccctaca
aacgtggatgaggaagcgctcacactctccttggtcattgccttggcatctgtgtcttct
ctcttccttttgtctgtgctgctgttcgtgggggtgaggctgtgcaggaaggccacgaca
gcctctctgggtggctactctgtgtctgagggacactttcctggccacctggtggacttc
agcggtgcagagaccctgtcccagagctaccagtacaaggtgtgtctgacatga

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