KEGG   Rattus norvegicus (rat): 307492
Entry
307492            CDS       T01003                                 
Symbol
Hars1
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic
  KO
K01892  histidyl-tRNA synthetase [EC:6.1.1.21]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    307492 (Hars1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rno01007]
    307492 (Hars1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    307492 (Hars1)
Enzymes [BR:rno01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.21  histidine---tRNA ligase
     307492 (Hars1)
Amino acid related enzymes [BR:rno01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   307492 (Hars1)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    307492 (Hars1)
 Prokaryotic type
    307492 (Hars1)
SSDB
Motif
Pfam: tRNA-synt_His HGTP_anticodon HGTP_anticodon2 WHEP-TRS HHH_3 tRNA-synt_2 Virul_Fac tRNA-synt_2d
Other DBs
NCBI-GeneID: 307492
NCBI-ProteinID: NP_001020585
RGD: 1310695
Ensembl: ENSRNOG00000028105
UniProt: Q4QQV4
Position
18:complement(28655669..28672712)
AA seq 508 aa
MADRAALEELVRLQGAHVRGLKEQKASAEQIEEEVTKLLKLKAQLGHDEGKQKFVLKTPK
GTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQ
GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
QFDPMIPDAECLKIMCEILSSLQIGNFQVKVNDRRILDGMFAVCGVPDSKFRTICSSVDK
LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQAVEGLG
DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQMPTQAGEEPLGVGSIAAG
GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQKLEASEEKVRTTETQVLVASAQKKL
LEERLKLISELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
VTSREEVDVRREDLVEEIRRRTSQPLSM
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggcagatcgtgctgcgctggaggagctggtgcgactccagggagcgcatgtgaggggc
cttaaggagcagaaagcgtccgctgagcagatcgaggaggaggtgacgaaactcctaaaa
ctgaaggcacagctgggccatgatgaaggcaaacagaagttcgtcctcaaaacccccaag
ggcacgagagactatagtccccggcagatggcagtccgagaaaaggtgtttgatgtcatc
atccgctgtttcaaacgccatggagcagaagtgatcgatacacctgtgtttgaactaaag
gagacactaactggaaaatacggagaagactcaaagcttatctatgacctgaaggaccag
ggtggggagctgctgtccctccgttatgacctcactgtcccttttgctcggtatctagca
atgaataaactgaccaacattaaacgctaccacatagcaaaggtgtatcgccgggacaac
ccagctatgacccgaggccgttaccgtgaattctatcagtgtgattttgacattgctgga
cagttcgaccccatgattcctgatgcagagtgcctaaagattatgtgtgagatcctgagt
tcacttcagattggcaacttccaggtcaaggtaaatgataggcgcatcctagacgggatg
tttgctgtctgtggtgtccctgatagcaagttccgtaccatctgctcctccgtggacaag
ctagacaaggtttcctgggaggaagtgaagaatgagatggtgggagagaagggcctcgca
cctgaagtggctgatcgcatcggggactatgtccagcagcatggtggggtgtctctggtg
gaacagttactccaggatcctaaactctcccaaaacaaacaggctgtagagggcttggga
gacctaaagctgctctttgagtatctaaccctatttggcattgatgacaagatctccttt
gacttgagccttgctcgagggctggactactacactggggtcatctatgaggcagtgctg
ctacaaatgccaacccaagctggggaagagcccttgggtgtgggcagcatagctgctgga
gggcgctacgatggactagtaggcatgtttgaccccaaagggcgcaaggtgccatgtgtt
gggctcagtattggagtggaacggatcttctccattgtagagcaaaaattagaggcttca
gaggaaaaggtgcggaccacagagacgcaggtgcttgtggcatctgcacagaagaagctg
ctggaggagagactgaagcttatctcagagttatgggatgctgggatcaaggctgagctg
ctgtacaagaagaacccaaagttactgaaccagttgcagtactgtgaggaagcaggcatc
ccactggtggccatcattggtgagcaggagcttaaggatggtgtcatcaagctccgttca
gtgacgagcagagaagaggtggatgtccgaagagaagaccttgtggaggagatcagaaga
agaacaagtcagcccctctccatgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (35)   

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