KEGG   Rattus norvegicus (rat): 307643
Entry
307643            CDS       T01003                                 
Symbol
Usb1
Name
(RefSeq) U6 snRNA phosphodiesterase 1
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    307643 (Usb1)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    307643 (Usb1)
SSDB
Motif
Pfam: HVSL
Other DBs
NCBI-GeneID: 307643
NCBI-ProteinID: NP_001014035
RGD: 1305215
Ensembl: ENSRNOG00000013216
UniProt: Q5I0I5 A6JY12
Position
19:complement(9695370..9708329)
AA seq 267 aa
MNAAPLVGYSSSGSEDEAEAVAAGRSKPGSGLHRCGQNPLPSQRFPVPDSVLNMFPSTEE
GPEDDSARHGGRIRTFPHERGNWATHIYIPYEANEEFQDLLDVLLPRAQMFAPRLVQMEE
FHLSLSQSVVLRHHWILPFVQVLKDRMASFQRFFFTANRVKIYTNQEKTRTFIGLEVSSG
HAQFLDMVSEVDRVMKEFDLTTFYQDPSFHVSLAWCVGDARLQLEGQCQQELQEIVDEFE
DSEMLLRVLAEQVRCKSGNKFFSMPLK
NT seq 804 nt   +upstreamnt  +downstreamnt
atgaacgcggcgcccctggtgggctacagcagcagcggttcggaggatgaagcggaggcc
gtcgccgcggggcgcagcaaaccggggtctggactccaccgttgtggccagaacccactt
ccgagtcagaggtttccagtgcccgacagtgtgctaaacatgttccccagcacagaggaa
ggacctgaggatgacagtgcaaggcatgggggtcgcatccgaacctttccccacgagcgg
ggcaactgggccacccacatctacataccatatgaggcgaatgaggagttccaggatctg
cttgacgtgttgctgccccgagctcagatgttcgcgcctcgactggtgcagatggaggag
ttccacctcagcctgtctcagagcgtggttctccgtcaccactggatcctcccctttgtg
caggtgctcaaagaccgcatggcctctttccaaaggttcttctttactgccaacagggta
aagatttataccaatcaagagaaaaccaggaccttcattgggctcgaggtcagctcaggg
catgcccagttcctggacatggtttcagaggtggacagagtcatgaaggaatttgacctc
actactttctaccaggacccttcatttcatgtcagtctggcctggtgtgtgggtgatgcc
cgtctacagttggagggacagtgtcagcaggaactacaggaaattgtggatgagtttgaa
gactcagagatgctgttacgtgtgctggctgaacaagtccgctgcaagtccgggaacaaa
ttcttctcgatgcctttgaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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